| Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
|---|---|
| Accession | NC_011900 |
| Length | 2,221,315 |
Click here to switch to the map view.
The map label for this gene is glnM [H]
Identifier: 221231431
GI number: 221231431
Start: 533031
End: 533708
Strand: Reverse
Name: glnM [H]
Synonym: SPN23F_05480
Alternate gene names: 221231431
Gene position: 533708-533031 (Counterclockwise)
Preceding gene: 221231432
Following gene: 221231430
Centisome position: 24.03
GC content: 43.36
Gene sequence:
>678_bases ATGACAGATTTATCATCTTGGACAGCCTATTTTCAGGATTTTGGACAATTTTTCAATGGTTTCCTCTTTACTCTTGCCCT AGCGATTGGATTCTTTATCCTCGCCATGGTCTTAGGAATCTTCTTTGGTGCCATGTCAACCAGTAAACGTCCAATTTTAC GCATTTTAGCTCACATCTTTGTGGAATTTTACCAAAACACTCCCCTCTTGGTGCAGTTTGTTATTGTTTTTTATGGCCTA CCTCTTATCAGTGACCATACTATCATGATTCCAATTTATTGGACAGCTGTTCTCTGCGTGGGACTCTATCACGGCGCTTA TATCGCTGAGGTTATTCGTTCAGGGATTCAGTCTATTCCTAGTGGTCAGATGGAGGCCGCCTTGTCGCAAGGTTTTACCT ATATCAGTGCCATGCGCTTGATTACCTTGCCTCAGGCCTTCCGCATCATTCTCCCTCCATTGACCAACCAAATTGTTAAC CTCATCAAGAACACATCTACTGTAGCTATCATCTCTGGAGTAGACTTGATGTTTGTGACTAAGTCTTGGTCGGCTCTCAA CGGAAACTATATCCCAGCCTTTTTAGGTGCTGCTCTTCTCTACTTTGCCCTATGCTTCCCTGTTGCCCAGTTTGGTCGCA AGATGGAGCAAGCCAATAAAAAAGCCTATTCACTTTAG
Upstream 100 bases:
>100_bases CTTGGTTACTAAATGGAGCAAGGATGGTAGTTTGCAGAAACTTTATGACCGTTACAAGCTCAAACCATCTAGCCATACTG CAGATTAAGGAGGACACCCC
Downstream 100 bases:
>100_bases GAGGTTACTATGGAATCTATTTTAGAAATTTTAACCCCAGATAACCTAGTCTTTATCTTTAAAGGATTTGGCTTGACCCT CTATATTTCTCTGATTGCCA
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTDLSSWTAYFQDFGQFFNGFLFTLALAIGFFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTPLLVQFVIVFYGL PLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVN LIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKKAYSL
Sequences:
>Translated_225_residues MTDLSSWTAYFQDFGQFFNGFLFTLALAIGFFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTPLLVQFVIVFYGL PLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVN LIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKKAYSL >Mature_224_residues TDLSSWTAYFQDFGQFFNGFLFTLALAIGFFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTPLLVQFVIVFYGLP LISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNL IKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKKAYSL
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=173, Percent_Identity=35.8381502890173, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=34.6153846153846, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1788226, Length=206, Percent_Identity=32.5242718446602, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=27.906976744186, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=27.3584905660377, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI48994930, Length=90, Percent_Identity=43.3333333333333, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=26.1467889908257, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787086, Length=178, Percent_Identity=26.4044943820225, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788646, Length=175, Percent_Identity=26.8571428571429, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1787087, Length=180, Percent_Identity=28.3333333333333, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25043; Mature: 24912
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSSWTAYFQDFGQFFNGFLFTLALAIGFFILAMVLGIFFGAMSTSKRPILRILAHIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VEFYQNTPLLVQFVIVFYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIP HHHHCCCHHHHHHHHHHHCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMFVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHEEEE KSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKKAYSL CCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDLSSWTAYFQDFGQFFNGFLFTLALAIGFFILAMVLGIFFGAMSTSKRPILRILAHIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VEFYQNTPLLVQFVIVFYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIP HHHHCCCHHHHHHHHHHHCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMFVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHEEEE KSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKKAYSL CCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]