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The map label for this gene is 220933179

Identifier: 220933179

GI number: 220933179

Start: 2565508

End: 2565924

Strand: Reverse

Name: 220933179

Synonym: Hore_23470

Alternate gene names: NA

Gene position: 2565924-2565508 (Counterclockwise)

Preceding gene: 220933180

Following gene: 220933177

Centisome position: 99.53

GC content: 36.93

Gene sequence:

>417_bases
ATGCTTGGCAACAAAAATGATGGTAAGGTAACAGAAGAGATGAAAAGCAAAGTAGAAACTATTCTAGGAAATGGTACAAA
AATAGAGGGGGACCTATTTACAAAAGGTTCTTTAAGGGTTGAAGGAGAAGTTATCGGCAATATTAAAGCCGAGGGCGATC
TTTTCGTAGGGGAAAAAGGCAAACTAAAAACTGAAATAGATGCCAGAAATGTTATTATTGCCGGAACCGTTAATGGTAAT
ATAGTAGCCAGGGAGAAACTGGAGATTCTCCCCAGCGGACAATTAAATGGTGATATTAAAACCAAAAAGCTAAAAATTGA
AGAAGGAGCAGTCTTTATTGGATCCAGCAGTCCCTTAAATGGAAAATCAGATAATGATAAGTACAAAAAAGAAGCTGCTT
CTACCAGGAAAAAGTAA

Upstream 100 bases:

>100_bases
GTGGTAATTCAGGTAAGAGTACAGGTCCTCACCTTCATTATGAAGTCAGAAAAAACAATATTCCTCAAAATCCTAGAAAT
TACATAGGGAGGTAAGAAAG

Downstream 100 bases:

>100_bases
AGAAGCAGTAATACCTTTTCAAATCAACATAGAAAACAAAAATAAAAAGATAAAAATAAACAGATAAAAATAAATACTTA
TGTTTTAATTGATTTACGTA

Product: cell shape determination protein CcmA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLGNKNDGKVTEEMKSKVETILGNGTKIEGDLFTKGSLRVEGEVIGNIKAEGDLFVGEKGKLKTEIDARNVIIAGTVNGN
IVAREKLEILPSGQLNGDIKTKKLKIEEGAVFIGSSSPLNGKSDNDKYKKEAASTRKK

Sequences:

>Translated_138_residues
MLGNKNDGKVTEEMKSKVETILGNGTKIEGDLFTKGSLRVEGEVIGNIKAEGDLFVGEKGKLKTEIDARNVIIAGTVNGN
IVAREKLEILPSGQLNGDIKTKKLKIEEGAVFIGSSSPLNGKSDNDKYKKEAASTRKK
>Mature_138_residues
MLGNKNDGKVTEEMKSKVETILGNGTKIEGDLFTKGSLRVEGEVIGNIKAEGDLFVGEKGKLKTEIDARNVIIAGTVNGN
IVAREKLEILPSGQLNGDIKTKKLKIEEGAVFIGSSSPLNGKSDNDKYKKEAASTRKK

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14803; Mature: 14803

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGNKNDGKVTEEMKSKVETILGNGTKIEGDLFTKGSLRVEGEVIGNIKAEGDLFVGEKG
CCCCCCCCCHHHHHHHHHHHHHCCCCEECCCEEECCCEEECCEEEEEEECCCCEEECCCC
KLKTEIDARNVIIAGTVNGNIVAREKLEILPSGQLNGDIKTKKLKIEEGAVFIGSSSPLN
CEEEEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCEEEEECCCCCC
GKSDNDKYKKEAASTRKK
CCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLGNKNDGKVTEEMKSKVETILGNGTKIEGDLFTKGSLRVEGEVIGNIKAEGDLFVGEKG
CCCCCCCCCHHHHHHHHHHHHHCCCCEECCCEEECCCEEECCEEEEEEECCCCEEECCCC
KLKTEIDARNVIIAGTVNGNIVAREKLEILPSGQLNGDIKTKKLKIEEGAVFIGSSSPLN
CEEEEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCEEEEECCCCCC
GKSDNDKYKKEAASTRKK
CCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA