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The map label for this gene is parB [H]

Identifier: 220933050

GI number: 220933050

Start: 2416072

End: 2417016

Strand: Reverse

Name: parB [H]

Synonym: Hore_22180

Alternate gene names: 220933050

Gene position: 2417016-2416072 (Counterclockwise)

Preceding gene: 220933056

Following gene: 220933049

Centisome position: 93.75

GC content: 42.33

Gene sequence:

>945_bases
ATGGATTTTGCCCGGATTCCCCTGGATAAGATTAAGATAGATAAAAATCAGTCCCGTCAGGAGTTTGATGCAGAGGGCAT
AAAACAACTGGCCCGGTCTATCGATGAAGTGGGGCAGCTCCAGCCTGTAATCGTTAAAAAGAACGGGGATGAATACAGGC
TTGTTGCTGGAGAAAGGCGTTATCGGGCTGTTAAAAAATCAAGTAGTCGGGAGAAAATAGCTGCCCTGATTTTAAAAGAA
GATACGGGAGAGTCGTTGTTAAAACAAATTCAGCTTATTGAAAACCTGCAGCGGGAAGATTTAAATCCCCTGGAGAGGGC
CCTTTCAATAAAGAGGTTTATAGATGAAAATAACCTTACCAAGAAGGAAGCCAGCAAAAAGCTGGGGGTTCCCCGGACAA
CCCTGACCGAGTGGCTAAATATCCTGGAAGTACCCCCTAGATATCGGGAAGAGGTAATAGATGAAGATTCTCCCCTTACC
TTATCCCATATAAGTATTGCCAAAGCCCTGGCCAGTCGGACCGGTGACCCAACCAAATTGAAACAGTTACTGGATGTAGT
TCTTAAATATAATTTGAATCGTAAGGAAACCAAAGAGAGTGTTAACCTCTACCGAAAGTATCTTCATATGCCCATGGATG
AAGCTGTCAGTGTTATTTTGCTGAGGCGGGAAAGACAGAAGTTATCTGATCGGCTTAGAGAAGAGGATGGGTCTGGCCGT
GGGAACCCTAATCCCTTTAACAGGTTATTAAAATCCTTTAACAAAACAGGTCAAACCATGGAAGAAGTTATGGAAAAAGC
AGGGGTTCCCGATGAAGATATTAAGGAAAGCCTGATTGATGAGTTTCTATATATTTATCAGCTTATGGAGATTATGGTAC
CGGAATTGAAAAACAAAAAGGTAGCAGACCTTATTGAGGGTATCAGGAAGAATAATAGTTTATGA

Upstream 100 bases:

>100_bases
AGGGGTAAACGGAATCCATCCTGTAAGCAGGAAATAATTTTCTCAGGTAGAACAAATAAATAAAAGATATAATTATATAA
GAATGGGAAGGTGGTATACC

Downstream 100 bases:

>100_bases
TAAATAAATAAGGTTGAATATCAAAAGCGAACGTTAAACTAAAATAACAATAAAATGTTCGAAAAAATTATTGACATTTG
TTAGCTGGGTTCGGTATAAT

Product: parB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MDFARIPLDKIKIDKNQSRQEFDAEGIKQLARSIDEVGQLQPVIVKKNGDEYRLVAGERRYRAVKKSSSREKIAALILKE
DTGESLLKQIQLIENLQREDLNPLERALSIKRFIDENNLTKKEASKKLGVPRTTLTEWLNILEVPPRYREEVIDEDSPLT
LSHISIAKALASRTGDPTKLKQLLDVVLKYNLNRKETKESVNLYRKYLHMPMDEAVSVILLRRERQKLSDRLREEDGSGR
GNPNPFNRLLKSFNKTGQTMEEVMEKAGVPDEDIKESLIDEFLYIYQLMEIMVPELKNKKVADLIEGIRKNNSL

Sequences:

>Translated_314_residues
MDFARIPLDKIKIDKNQSRQEFDAEGIKQLARSIDEVGQLQPVIVKKNGDEYRLVAGERRYRAVKKSSSREKIAALILKE
DTGESLLKQIQLIENLQREDLNPLERALSIKRFIDENNLTKKEASKKLGVPRTTLTEWLNILEVPPRYREEVIDEDSPLT
LSHISIAKALASRTGDPTKLKQLLDVVLKYNLNRKETKESVNLYRKYLHMPMDEAVSVILLRRERQKLSDRLREEDGSGR
GNPNPFNRLLKSFNKTGQTMEEVMEKAGVPDEDIKESLIDEFLYIYQLMEIMVPELKNKKVADLIEGIRKNNSL
>Mature_314_residues
MDFARIPLDKIKIDKNQSRQEFDAEGIKQLARSIDEVGQLQPVIVKKNGDEYRLVAGERRYRAVKKSSSREKIAALILKE
DTGESLLKQIQLIENLQREDLNPLERALSIKRFIDENNLTKKEASKKLGVPRTTLTEWLNILEVPPRYREEVIDEDSPLT
LSHISIAKALASRTGDPTKLKQLLDVVLKYNLNRKETKESVNLYRKYLHMPMDEAVSVILLRRERQKLSDRLREEDGSGR
GNPNPFNRLLKSFNKTGQTMEEVMEKAGVPDEDIKESLIDEFLYIYQLMEIMVPELKNKKVADLIEGIRKNNSL

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 36283; Mature: 36283

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFARIPLDKIKIDKNQSRQEFDAEGIKQLARSIDEVGQLQPVIVKKNGDEYRLVAGERR
CCCCCCCHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCHHH
YRAVKKSSSREKIAALILKEDTGESLLKQIQLIENLQREDLNPLERALSIKRFIDENNLT
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH
KKEASKKLGVPRTTLTEWLNILEVPPRYREEVIDEDSPLTLSHISIAKALASRTGDPTKL
HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH
KQLLDVVLKYNLNRKETKESVNLYRKYLHMPMDEAVSVILLRRERQKLSDRLREEDGSGR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNPNPFNRLLKSFNKTGQTMEEVMEKAGVPDEDIKESLIDEFLYIYQLMEIMVPELKNKK
CCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VADLIEGIRKNNSL
HHHHHHHHHHCCCC
>Mature Secondary Structure
MDFARIPLDKIKIDKNQSRQEFDAEGIKQLARSIDEVGQLQPVIVKKNGDEYRLVAGERR
CCCCCCCHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCHHH
YRAVKKSSSREKIAALILKEDTGESLLKQIQLIENLQREDLNPLERALSIKRFIDENNLT
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH
KKEASKKLGVPRTTLTEWLNILEVPPRYREEVIDEDSPLTLSHISIAKALASRTGDPTKL
HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH
KQLLDVVLKYNLNRKETKESVNLYRKYLHMPMDEAVSVILLRRERQKLSDRLREEDGSGR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNPNPFNRLLKSFNKTGQTMEEVMEKAGVPDEDIKESLIDEFLYIYQLMEIMVPELKNKK
CCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VADLIEGIRKNNSL
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]