| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yqeW [H]
Identifier: 220932998
GI number: 220932998
Start: 2357414
End: 2359060
Strand: Reverse
Name: yqeW [H]
Synonym: Hore_21650
Alternate gene names: 220932998
Gene position: 2359060-2357414 (Counterclockwise)
Preceding gene: 220932999
Following gene: 220932997
Centisome position: 91.5
GC content: 39.16
Gene sequence:
>1647_bases TTGTCGTTACAACTGGTTTTTCCTTTGTTGGGTGGGCTAGGCTTATTTATTTACGGTATGAAACAAATGAGTGAGGGGCT TCAAAAGGTGGCGGGTAAAAAGCTCCGTCATTTTCTGGCTATATTAACAACAAGACCCCTGGTCGGGGTTCTGGTGGGTA CCCTGGTTACAGCTATTATCCAGAGTAGTAGTGCCACTACGGTTATGGTAGTAGGGTTTGTTAATGCTGGATTGATGACC CTTTCTCAATCAATCGGGGTTATTATGGGGGCTAACATTGGTACGACAGTGACTGCCCAGATAGTAGCCTTTAAACTTGG CGATTATGCTTTCCACACTATAACTATTGGTGCTTTTGCTTATCTATTTTCCCGTAATCAAAAGATACAATATTTGGGAC AGGTTTTACTCGGGTTCGGGATTTTGTTCCTGGGGTTAAATACTATGAGTGACACCATGAAACCCCTGCGAGATTCAGTG TATTTCTTAAATTTAATGGAAAACTTCAGTAGTTATCCCCTGCTCGGGGTTCTGGCAGGAATGTTGGTTACCATGGTAAT TCAGAGCAGTAGTGCTACCTTTGGTATTCTCCTGGGTCTTGTTTCAGTGGGTGCTATTACTTATCAGGCCGGTATCCCGA TTTTGCTTGGTAGTAATATTGGGACTACCATTACTGCAATTTTATCAAGTATCGGGGCTAACCGTTCTGCCAAGAGGGCA GCAGCTGCCCATTTTATTTTTAATGTACTGGGAGCTGGTATTGTAATTGTATTAATATATGTGATCCCTGATTTTACTGA TAGTATACATCAATTTTTGATTAAATTATCTAACCTGTTTGGACATACCCCTACTTCAGAAAGGTTACTTGCCAATACAC ATACCCTGTTTAATGTCCTTAATACCCTGTTATGGTTACCGTTTGTTGGTTTTATGGTTAAAATAGTAAAATCTGTTTTA CCAGGTGATGAGGTTGCAGTAAAACGGGGCTTAAATTATCTTGATGAAAGGATGCTAAAGACACCCAGTCTCGCCTTAAA TCAGTTGAAGAAAGAAGTTATAAGGATGTATGGTATTACCCAGGAAATGGTCAGGGAATCTATAAAAATATTTAAGGAGG GCCATGATAGTAAGATAGTAAAAGCGGTTCACCATAAAGAAGATATTATAAATGAAATAGAAGAAGACCTGATCAAGTTT ATAAGTAGTGTTCCCCGTAATTCTCTATCTGGAGGGGATTTGAGGGTTTTAAATATGTATTATGCCATAATTGATGATAT AGAAAGTATAGCTGATGATGCTGTAGAAATGGTAGAACTGGGTAGTTACAGCTGGGAGAATAATCTCAAGTATTCAGATG AAGCCTGGAAGAGCCTTAATGAAAATTTTGATTTAATTTTTGACCTGATTGAGTCTTCATATGAGATGGTTGAGACTGAA AATCTTGAGTTATCAACCCAGATTCTGGATGCTGAAGATAAAATGGATCAATACCAGCTGGAAAACAGGAATTGTCACTT AAAAAGACTTGGTAGTGGTATCTGTGAGCCCGGGGCTGGTATAGTATACCTTGAAATTCTTGATAGATTAGAGCATATCA GTGACCAGGCAGCCGATATTGCCCACAGTATGACAGAAGCTTTATAA
Upstream 100 bases:
>100_bases ATGTCGAATAATAGTAGTGGTGTTTTAAGAAAAAAGTACTATTATAAAACTAGCTTTATCTATAATATAATATTAAATTA TTGGGGAGGGGAATTGGACC
Downstream 100 bases:
>100_bases ATGTTAAGCCTCCTTTGACAGGGGGCTTTTTTTTGTTATACTTAAGATAAAGAGGAGGAGTGTTATGGAGAAAATACTGG TTATAGATGATGAAGAGAAT
Product: Na/Pi-cotransporter II-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MSLQLVFPLLGGLGLFIYGMKQMSEGLQKVAGKKLRHFLAILTTRPLVGVLVGTLVTAIIQSSSATTVMVVGFVNAGLMT LSQSIGVIMGANIGTTVTAQIVAFKLGDYAFHTITIGAFAYLFSRNQKIQYLGQVLLGFGILFLGLNTMSDTMKPLRDSV YFLNLMENFSSYPLLGVLAGMLVTMVIQSSSATFGILLGLVSVGAITYQAGIPILLGSNIGTTITAILSSIGANRSAKRA AAAHFIFNVLGAGIVIVLIYVIPDFTDSIHQFLIKLSNLFGHTPTSERLLANTHTLFNVLNTLLWLPFVGFMVKIVKSVL PGDEVAVKRGLNYLDERMLKTPSLALNQLKKEVIRMYGITQEMVRESIKIFKEGHDSKIVKAVHHKEDIINEIEEDLIKF ISSVPRNSLSGGDLRVLNMYYAIIDDIESIADDAVEMVELGSYSWENNLKYSDEAWKSLNENFDLIFDLIESSYEMVETE NLELSTQILDAEDKMDQYQLENRNCHLKRLGSGICEPGAGIVYLEILDRLEHISDQAADIAHSMTEAL
Sequences:
>Translated_548_residues MSLQLVFPLLGGLGLFIYGMKQMSEGLQKVAGKKLRHFLAILTTRPLVGVLVGTLVTAIIQSSSATTVMVVGFVNAGLMT LSQSIGVIMGANIGTTVTAQIVAFKLGDYAFHTITIGAFAYLFSRNQKIQYLGQVLLGFGILFLGLNTMSDTMKPLRDSV YFLNLMENFSSYPLLGVLAGMLVTMVIQSSSATFGILLGLVSVGAITYQAGIPILLGSNIGTTITAILSSIGANRSAKRA AAAHFIFNVLGAGIVIVLIYVIPDFTDSIHQFLIKLSNLFGHTPTSERLLANTHTLFNVLNTLLWLPFVGFMVKIVKSVL PGDEVAVKRGLNYLDERMLKTPSLALNQLKKEVIRMYGITQEMVRESIKIFKEGHDSKIVKAVHHKEDIINEIEEDLIKF ISSVPRNSLSGGDLRVLNMYYAIIDDIESIADDAVEMVELGSYSWENNLKYSDEAWKSLNENFDLIFDLIESSYEMVETE NLELSTQILDAEDKMDQYQLENRNCHLKRLGSGICEPGAGIVYLEILDRLEHISDQAADIAHSMTEAL >Mature_547_residues SLQLVFPLLGGLGLFIYGMKQMSEGLQKVAGKKLRHFLAILTTRPLVGVLVGTLVTAIIQSSSATTVMVVGFVNAGLMTL SQSIGVIMGANIGTTVTAQIVAFKLGDYAFHTITIGAFAYLFSRNQKIQYLGQVLLGFGILFLGLNTMSDTMKPLRDSVY FLNLMENFSSYPLLGVLAGMLVTMVIQSSSATFGILLGLVSVGAITYQAGIPILLGSNIGTTITAILSSIGANRSAKRAA AAHFIFNVLGAGIVIVLIYVIPDFTDSIHQFLIKLSNLFGHTPTSERLLANTHTLFNVLNTLLWLPFVGFMVKIVKSVLP GDEVAVKRGLNYLDERMLKTPSLALNQLKKEVIRMYGITQEMVRESIKIFKEGHDSKIVKAVHHKEDIINEIEEDLIKFI SSVPRNSLSGGDLRVLNMYYAIIDDIESIADDAVEMVELGSYSWENNLKYSDEAWKSLNENFDLIFDLIESSYEMVETEN LELSTQILDAEDKMDQYQLENRNCHLKRLGSGICEPGAGIVYLEILDRLEHISDQAADIAHSMTEAL
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjbB [H]
Homologues:
Organism=Homo sapiens, GI110611906, Length=121, Percent_Identity=38.0165289256198, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI295789160, Length=121, Percent_Identity=38.0165289256198, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI295789158, Length=121, Percent_Identity=38.0165289256198, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI1790451, Length=459, Percent_Identity=25.0544662309368, Blast_Score=123, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 60254; Mature: 60123
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQLVFPLLGGLGLFIYGMKQMSEGLQKVAGKKLRHFLAILTTRPLVGVLVGTLVTAII CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSSSATTVMVVGFVNAGLMTLSQSIGVIMGANIGTTVTAQIVAFKLGDYAFHTITIGAFA HCCCCCEEEEEHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH YLFSRNQKIQYLGQVLLGFGILFLGLNTMSDTMKPLRDSVYFLNLMENFSSYPLLGVLAG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MLVTMVIQSSSATFGILLGLVSVGAITYQAGIPILLGSNIGTTITAILSSIGANRSAKRA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHH AAAHFIFNVLGAGIVIVLIYVIPDFTDSIHQFLIKLSNLFGHTPTSERLLANTHTLFNVL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NTLLWLPFVGFMVKIVKSVLPGDEVAVKRGLNYLDERMLKTPSLALNQLKKEVIRMYGIT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH QEMVRESIKIFKEGHDSKIVKAVHHKEDIINEIEEDLIKFISSVPRNSLSGGDLRVLNMY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH YAIIDDIESIADDAVEMVELGSYSWENNLKYSDEAWKSLNENFDLIFDLIESSYEMVETE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCC NLELSTQILDAEDKMDQYQLENRNCHLKRLGSGICEPGAGIVYLEILDRLEHISDQAADI CCCHHHHHHCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH AHSMTEAL HHHHHHCC >Mature Secondary Structure SLQLVFPLLGGLGLFIYGMKQMSEGLQKVAGKKLRHFLAILTTRPLVGVLVGTLVTAII CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSSSATTVMVVGFVNAGLMTLSQSIGVIMGANIGTTVTAQIVAFKLGDYAFHTITIGAFA HCCCCCEEEEEHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH YLFSRNQKIQYLGQVLLGFGILFLGLNTMSDTMKPLRDSVYFLNLMENFSSYPLLGVLAG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MLVTMVIQSSSATFGILLGLVSVGAITYQAGIPILLGSNIGTTITAILSSIGANRSAKRA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHH AAAHFIFNVLGAGIVIVLIYVIPDFTDSIHQFLIKLSNLFGHTPTSERLLANTHTLFNVL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NTLLWLPFVGFMVKIVKSVLPGDEVAVKRGLNYLDERMLKTPSLALNQLKKEVIRMYGIT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH QEMVRESIKIFKEGHDSKIVKAVHHKEDIINEIEEDLIKFISSVPRNSLSGGDLRVLNMY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH YAIIDDIESIADDAVEMVELGSYSWENNLKYSDEAWKSLNENFDLIFDLIESSYEMVETE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCC NLELSTQILDAEDKMDQYQLENRNCHLKRLGSGICEPGAGIVYLEILDRLEHISDQAADI CCCHHHHHHCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH AHSMTEAL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]