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The map label for this gene is opuAC [H]

Identifier: 220932981

GI number: 220932981

Start: 2338630

End: 2339487

Strand: Reverse

Name: opuAC [H]

Synonym: Hore_21490

Alternate gene names: 220932981

Gene position: 2339487-2338630 (Counterclockwise)

Preceding gene: 220932982

Following gene: 220932980

Centisome position: 90.74

GC content: 41.49

Gene sequence:

>858_bases
ATGTTTAAAAAAAGATTATTGATTTTTATTGCTATAAGTCTTAGCTTACTTCTATTAATTAGTGGGTGTACCAGTAAACC
CGGGAAGACAAAAATTAAGTTAGGTTATGTAAACTGGGCAGAAGGAATAGCGATGACCCATCTGGCCAAAGTAATTATAG
AAGATGAATTGGGGTATGAAGTCCAAACTGTGATGGCCGATGTTGGACCTATTTTTCAGGGGATGGCCAGTGGTAATATT
GATGCCTTTATGGATGTCTGGCTTCCGGTAACCCATGGTGAATATGTAAATAAACTCGAAGATGATATTATCCGACTTGG
AAAGAATTTTACCGGTGCCAGAATCGGACTGGTTGTCCCGACCTATGTTGAAATAGATTCAATTGAAGATCTGAACCAGT
ATAAGGACAAATTTGACGGGAAGATAATTGGAATTGATGCCGGGGCCGGTATTATGCAAAAAACCAGAAAAGCTATAGAG
GAATATGGACTTGAGCTGGAATTAATTGAAGGTAGTGGTCCGGCCATGGCAGCTGCTCTGAAAAAGGCCATTGATAATGG
GGAATGGATAGTTGTTACCGGGTGGCAACCCCACTGGAAGTTTGCCCGCTTTGACCTGAAGTTTTTGAAAGACCCCAGAG
GTGTTTATGGCCAGGCCGAAAATTTATATACCTATACCCGGACTGGCTTTGAGGAAGATGCCCCCGGGGTTGCTAATTTC
CTTGAGAACTTCTCCATGAGCAGTAAACAGTTAGGAAGTTTAATGGGAATAATAGCTGATGGTAAAAAACCGGTCACAGC
AGCCCGGGAATGGATAAAAAATAATAGAGAAGTAGTTGATGGCTGGTTAAATAAGTAG

Upstream 100 bases:

>100_bases
CGTTGTTATTCTGGCTATATTTCTTGATAGATTAACCCAGAGTTTAAAAGAACTATAAGGGAGTTAAAAAAAACGATAAG
AACATAAGGAGGTATAAGAA

Downstream 100 bases:

>100_bases
TAATACCTTTATAATAAGTTTTCTTTTAAATAAAATATTATTAACAGGCAAGGTCAGATGAAATTATTTAAAACTTTACT
AAAAAGTGTAAATATATCAG

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MFKKRLLIFIAISLSLLLLISGCTSKPGKTKIKLGYVNWAEGIAMTHLAKVIIEDELGYEVQTVMADVGPIFQGMASGNI
DAFMDVWLPVTHGEYVNKLEDDIIRLGKNFTGARIGLVVPTYVEIDSIEDLNQYKDKFDGKIIGIDAGAGIMQKTRKAIE
EYGLELELIEGSGPAMAAALKKAIDNGEWIVVTGWQPHWKFARFDLKFLKDPRGVYGQAENLYTYTRTGFEEDAPGVANF
LENFSMSSKQLGSLMGIIADGKKPVTAAREWIKNNREVVDGWLNK

Sequences:

>Translated_285_residues
MFKKRLLIFIAISLSLLLLISGCTSKPGKTKIKLGYVNWAEGIAMTHLAKVIIEDELGYEVQTVMADVGPIFQGMASGNI
DAFMDVWLPVTHGEYVNKLEDDIIRLGKNFTGARIGLVVPTYVEIDSIEDLNQYKDKFDGKIIGIDAGAGIMQKTRKAIE
EYGLELELIEGSGPAMAAALKKAIDNGEWIVVTGWQPHWKFARFDLKFLKDPRGVYGQAENLYTYTRTGFEEDAPGVANF
LENFSMSSKQLGSLMGIIADGKKPVTAAREWIKNNREVVDGWLNK
>Mature_285_residues
MFKKRLLIFIAISLSLLLLISGCTSKPGKTKIKLGYVNWAEGIAMTHLAKVIIEDELGYEVQTVMADVGPIFQGMASGNI
DAFMDVWLPVTHGEYVNKLEDDIIRLGKNFTGARIGLVVPTYVEIDSIEDLNQYKDKFDGKIIGIDAGAGIMQKTRKAIE
EYGLELELIEGSGPAMAAALKKAIDNGEWIVVTGWQPHWKFARFDLKFLKDPRGVYGQAENLYTYTRTGFEEDAPGVANF
LENFSMSSKQLGSLMGIIADGKKPVTAAREWIKNNREVVDGWLNK

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 31643; Mature: 31643

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKRLLIFIAISLSLLLLISGCTSKPGKTKIKLGYVNWAEGIAMTHLAKVIIEDELGYE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHH
VQTVMADVGPIFQGMASGNIDAFMDVWLPVTHGEYVNKLEDDIIRLGKNFTGARIGLVVP
HHHHHHHHHHHHHHHCCCCHHEEHHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEE
TYVEIDSIEDLNQYKDKFDGKIIGIDAGAGIMQKTRKAIEEYGLELELIEGSGPAMAAAL
CEEEECCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHH
KKAIDNGEWIVVTGWQPHWKFARFDLKFLKDPRGVYGQAENLYTYTRTGFEEDAPGVANF
HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH
LENFSMSSKQLGSLMGIIADGKKPVTAAREWIKNNREVVDGWLNK
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MFKKRLLIFIAISLSLLLLISGCTSKPGKTKIKLGYVNWAEGIAMTHLAKVIIEDELGYE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHH
VQTVMADVGPIFQGMASGNIDAFMDVWLPVTHGEYVNKLEDDIIRLGKNFTGARIGLVVP
HHHHHHHHHHHHHHHCCCCHHEEHHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEE
TYVEIDSIEDLNQYKDKFDGKIIGIDAGAGIMQKTRKAIEEYGLELELIEGSGPAMAAAL
CEEEECCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHH
KKAIDNGEWIVVTGWQPHWKFARFDLKFLKDPRGVYGQAENLYTYTRTGFEEDAPGVANF
HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH
LENFSMSSKQLGSLMGIIADGKKPVTAAREWIKNNREVVDGWLNK
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]