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The map label for this gene is spoVT [H]

Identifier: 220932951

GI number: 220932951

Start: 2306916

End: 2307473

Strand: Reverse

Name: spoVT [H]

Synonym: Hore_21190

Alternate gene names: 220932951

Gene position: 2307473-2306916 (Counterclockwise)

Preceding gene: 220932952

Following gene: 220932950

Centisome position: 89.5

GC content: 42.83

Gene sequence:

>558_bases
ATGAAAGCCACAGGTATAGTTAGAAGAATTGATGATCTGGGTAGAGTAGTAATACCAAAAGAAATAAGACGGACGATGAG
AATAAGGGAAGGGGAACCATTAGAGATATTTGTTGACCGGGAAGGTGAGGTTATTTTAAAGAAATATTCCCCCATCGGGG
AGTTAAGCGAGTTTGCCCAGGAATATGCTGATGCCCTGGCAGAAGAGACCGACCAGGCTGTGTTTATTTTAGATAGAGAT
GTAATCATTGCTGTTTCCGGGGTTTCCCGTAAGGTTTTTATGGACAAACAAATAAGTCCAGAAGCCGAAAAAGTGATGGA
GGAACGACGGCCTAAATTATTTAATGATAAAGGTATAGAGGCATTTTGCAGTGAAGTCCCTGAAGGAGCTAATGATTATA
ATTTATCCTCTTCAGTACTGTCACCTATTATTGTAGAAGGGGACCCCATCGGGGTTGTTGTTATCAGCTCCAAGGGGGAC
GGGAAAGAAGTTGGAGAACTGGAACTGAAACTGGCCAACACGGCAGCATCATTTCTGGCTAAACAGATGGAGCAATAG

Upstream 100 bases:

>100_bases
ATAACTTGATTTACCAGAAACCTGAACTCTACCGGAAGGGAAGCCATTTCAGCCCAAGGGAGGTGAAAAAGCTGATTTTT
AATAAATCAGCTGAGGTTTA

Downstream 100 bases:

>100_bases
TACTTATCCCCCTCGTAATGAGGGGGAGTATTTTAACATAATTGATGATAATCGATCCTGGCTTACTTATATTAGGCGTA
AAGGGGATAAAAACTGGAAT

Product: AbrB family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKATGIVRRIDDLGRVVIPKEIRRTMRIREGEPLEIFVDREGEVILKKYSPIGELSEFAQEYADALAEETDQAVFILDRD
VIIAVSGVSRKVFMDKQISPEAEKVMEERRPKLFNDKGIEAFCSEVPEGANDYNLSSSVLSPIIVEGDPIGVVVISSKGD
GKEVGELELKLANTAASFLAKQMEQ

Sequences:

>Translated_185_residues
MKATGIVRRIDDLGRVVIPKEIRRTMRIREGEPLEIFVDREGEVILKKYSPIGELSEFAQEYADALAEETDQAVFILDRD
VIIAVSGVSRKVFMDKQISPEAEKVMEERRPKLFNDKGIEAFCSEVPEGANDYNLSSSVLSPIIVEGDPIGVVVISSKGD
GKEVGELELKLANTAASFLAKQMEQ
>Mature_185_residues
MKATGIVRRIDDLGRVVIPKEIRRTMRIREGEPLEIFVDREGEVILKKYSPIGELSEFAQEYADALAEETDQAVFILDRD
VIIAVSGVSRKVFMDKQISPEAEKVMEERRPKLFNDKGIEAFCSEVPEGANDYNLSSSVLSPIIVEGDPIGVVVISSKGD
GKEVGELELKLANTAASFLAKQMEQ

Specific function: Positive and negative transcriptional regulator of sigma G-dependent genes. May provide a mechanism of feedback control that is important for forespore development [H]

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis AbrB and Abh [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014213
- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 20515; Mature: 20515

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTMRIREGEPLEIFVDREGEVILKKYSPIGELSEFAQ
CCCHHHHHHHHHCCCEECCHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH
EYADALAEETDQAVFILDRDVIIAVSGVSRKVFMDKQISPEAEKVMEERRPKLFNDKGIE
HHHHHHHHCCCCEEEEEECCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHH
AFCSEVPEGANDYNLSSSVLSPIIVEGDPIGVVVISSKGDGKEVGELELKLANTAASFLA
HHHHHCCCCCCCCCCCHHHHCCEEECCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHH
KQMEQ
HHHCC
>Mature Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTMRIREGEPLEIFVDREGEVILKKYSPIGELSEFAQ
CCCHHHHHHHHHCCCEECCHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH
EYADALAEETDQAVFILDRDVIIAVSGVSRKVFMDKQISPEAEKVMEERRPKLFNDKGIE
HHHHHHHHCCCCEEEEEECCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHH
AFCSEVPEGANDYNLSSSVLSPIIVEGDPIGVVVISSKGDGKEVGELELKLANTAASFLA
HHHHHCCCCCCCCCCCHHHHCCEEECCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHH
KQMEQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 8755877 [H]