| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is malT [H]
Identifier: 220932886
GI number: 220932886
Start: 2218266
End: 2220929
Strand: Reverse
Name: malT [H]
Synonym: Hore_20540
Alternate gene names: 220932886
Gene position: 2220929-2218266 (Counterclockwise)
Preceding gene: 220932887
Following gene: 220932885
Centisome position: 86.14
GC content: 36.34
Gene sequence:
>2664_bases ATGAGTTATAATCTTAAAAAAGACTTTAATTTAACAGCCTACTTGAAAACAAAATTACATCCAGCACCTTTACCTTCTGG TATCATTCACCGTGAAAGATTATTAAATAAACTTGCTGAGGGTAGAAAAAACGGAACTAAATTAATATTAGTTTCTGCTC CGGCAGGGTATGGTAAATCTACCCTGATTACTGACTGGCTTGTAAGGGATAAGATTAAACATGCCTGGCTCTCTATTGAA GATGAGGATAACAAATTAGTTCCCTTTTTTGAATATCTGTTATCCTCCCTCCAGGAAATTAGTGAAGGTTTTGGGAAAAC AATCAGGAGTATACTGGCTTCCCCCCAGCTGCCACCTATCAATGTCCTCATTTCTTTGTTAATCCAGGAATTGGAGGCTT TACCCGCACCACTTACCATTGTTCTGGATGACTATCATTTTATTTCAAACAGGCAAATAAACCAGGGGATTTCTTATCTC CTGGAGCACCTACCTTTAGATTTTAAGTTGGTTATTATTAGCAGGCAGGATCCCCCCATTCCCCTGGGCCGTTTGAGGGC AAATAATCAGCTTACTGAAATAAGAATGAAGGATTTAAAATTTAATAAGCAGGAGGCTAGTTCTTTTTTCGAAGAGAACC TGCAGATAGCTCTTAATGAAGAGGAGGTTTCTCTTCTTAATTCTCGTACTGAAGGCTGGGTATCTGGCTTACAGCTTGCC GGGTTATCGTTAAAAGAGTCTGCAGAGGGAGAAAGAAAGGTATTTATTGATAATTTTTCGGGAAGTAATCGTTTTGTTAT TGATTACCTCTTTGAAGAGGTTCTGGTCAGGCAAAAGCCTGAAGTCAAGGATTTTCTTTGTAAAACCTCAGTTTTGAATA AATTTAATGATTCAATCTGTAATAGATTAACAGAAGACAGTAATAGTAAAAGTGTTATAACAGAGCTGGATAAAGGCAAT CATTTTATCATACCCCTGGATGTAAATAAAAGCTGGTATCGTTATCACCACTTATTCCGGGATTTCTTAACCTCTGAACT CTCTTTAGAAGAAAAAAAAGGATTACACAAAAAAGCTGCAAGCTGGTATGACGAAAGGGGCTATCTGCATGAGGCCATAT ATCATTCCAGGGAAGCAGATGATTTAGACCTTTTAGAGAGGCTAATTACTAAGCTGACTATTGATTTATTTAATAAAGGG GAAGTTGAAACCCTTTTAGAATATCTCGAATATTTACCAGAAAAAAGGCTTAAAAAAAATAGTAAACTCTTAATTTTTAA AACCTGGTGCCTGTTTTTGACTGGAAAGGGGAGGGAAATAGCTGGTTATCTCCAGCTTATCAAAGACAGGGAAGATATTA ATAAAAATGACTCTTATTATGGTTTGTTTTTAGCCTTAATAGTCCTTTTTGATCATCAAGAAAAAAACCTGGAGATGGCT GAAAAAGCGGTAGACATGATTGATAATAAAGAACACTTCTTTCGAATAGCTGCTTTATTATCCCTGGGGCAGGTTCAGGC CTCCATGGGGAAATATAGCGAGGCGGTTATTACCTTTAAAGAGGCAATGAATATTGGGAAGAAGACAGACTTTCATTTTG GCACCATTACTGCTTTAATCAATCTTGCCGTAAATTTAAACTGGCTGGGTCAGAGAAAAGAGGCAGTTTTAATCTGTGAG AATTCCCTTTATGAATATACCGATTCCAGGGGAAAAATTTATCCCCTGGCCAATTTAATATATATTCCTCTGGGAATCCT CAAATATGAAAATAACCAACTTAAATCAGCTTATAGTTATCTTCAAAAGGGGATAACTTTTTGCCAGGAGTGGTCCTTTG TCAGGATTATGGGCCTTGGGGAATGGTATATGGGACAGACCCTCTTTGCCCTTGGAAAGAAAGAAGAAGCGATAGAATTT GTTGAAGAAATAATTAACCTGGGTAAGCAGCTGGGTTTAAAGGGTCTTATCTTTTTTATGAATTGTCTGGAGGCTGATTT ATATGTAAAAGCAGACAATAAAGAAAAAGCTTTTCTCTGGGCAGAAGAAATAAAAAAATTCCCTGACCAGATGATAACTA TTTCAGGGATATTTATGGGGTTTACCTATACCCGGGTTTTACTGAGTCAACGCAAAATAGAAGAAGTTGACTCTATTTTG TCCAGGATTAATAATCTGGGGGTTAAGGGGCGTAATCTTATTACTGTTAGACTTTTACAAACTAAAATCAGTTATCTGGA GGGTAAAAAAAATAAGGCTTTAAAATGTCTGGTTGAAGCAGTTAAATTAGCTAGACCAGAGGGGTATACCAGAGCATTTC TAGATGAGGGTGAAGTAATTTATAAACTTTTATCTGAAGTTAAAGATGTTTCACCGGCTTTCATTACTGGTATTCTTGAG GCCTTTGACTTTAAAAAAAGCACATTTAATAATCAAAATTTGATTGAACCTCTAAGTGAGCGAGAACTTGAAATTCTGGG GTTAATTGTTAATGGTTTATCTAATAAAGAGATTGCTAAAAAGCTTTATATTACAGTAGGTACTACTAAATGGCATATAA GCAATATTTATGGTAAATTAGGTGTTAATAAACGTGCTCAGGCTATAAAAAAAGCTTTACAATTAGAACTGATTGCCGCT CCCGGACCAGAAGAAAACCTTTGA
Upstream 100 bases:
>100_bases AGCTTTTTTTACTAACCAAATTTTTTTGTCGAAAAAAGGAGTTTAAGACCTTTAAAAGAATAGTTTAGTTATAATTACCG TCAAAGAGGAGATTGAATAT
Downstream 100 bases:
>100_bases TAGGAAAGCTGCGAACAGGGCTCATTCTGGTAGTAAAATATTTAAAAAAATAATTTTCAAAAAATTTGACTTTATGAAAA TATTTATATATAATATATTT
Product: regulatory protein LuxR
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 887; Mature: 886
Protein sequence:
>887_residues MSYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKSTLITDWLVRDKIKHAWLSIE DEDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPINVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYL LEHLPLDFKLVIISRQDPPIPLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLA GLSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSICNRLTEDSNSKSVITELDKGN HFIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAASWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKG EVETLLEYLEYLPEKRLKKNSKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMA EKAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALINLAVNLNWLGQRKEAVLICE NSLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSYLQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEF VEEIINLGKQLGLKGLIFFMNCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSIL SRINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVIYKLLSEVKDVSPAFITGILE AFDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAKKLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAA PGPEENL
Sequences:
>Translated_887_residues MSYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKSTLITDWLVRDKIKHAWLSIE DEDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPINVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYL LEHLPLDFKLVIISRQDPPIPLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLA GLSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSICNRLTEDSNSKSVITELDKGN HFIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAASWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKG EVETLLEYLEYLPEKRLKKNSKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMA EKAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALINLAVNLNWLGQRKEAVLICE NSLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSYLQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEF VEEIINLGKQLGLKGLIFFMNCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSIL SRINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVIYKLLSEVKDVSPAFITGILE AFDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAKKLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAA PGPEENL >Mature_886_residues SYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKSTLITDWLVRDKIKHAWLSIED EDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPINVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYLL EHLPLDFKLVIISRQDPPIPLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLAG LSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSICNRLTEDSNSKSVITELDKGNH FIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAASWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKGE VETLLEYLEYLPEKRLKKNSKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMAE KAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALINLAVNLNWLGQRKEAVLICEN SLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSYLQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEFV EEIINLGKQLGLKGLIFFMNCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSILS RINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVIYKLLSEVKDVSPAFITGILEA FDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAKKLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAAP GPEENL
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=911, Percent_Identity=25.9055982436883, Blast_Score=265, Evalue=1e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 101575; Mature: 101444
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKS CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC TLITDWLVRDKIKHAWLSIEDEDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPI HHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH NVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYLLEHLPLDFKLVIISRQDPPI HHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC PLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLA CHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEECHHHHHHHHCCCHHHHHHHHHC GLSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSIC CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH NRLTEDSNSKSVITELDKGNHFIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAA HHHCCCCCCCHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHH SWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKGEVETLLEYLEYLPEKRLKKN HHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCC SKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMA CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHH EKAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH NLAVNLNWLGQRKEAVLICENSLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSY HHHHCCEECCCCCCEEEEECCCHHHHHCCCCCEEEHHHHHHHHHHHEEECCCHHHHHHHH LQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEFVEEIINLGKQLGLKGLIFFM HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH NCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSIL HHHCCCEEEEECCCCCCEEEHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH SRINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVI HHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHH YKLLSEVKDVSPAFITGILEAFDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAK HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHH KLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAAPGPEENL EEEEEECCCEEEHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCC >Mature Secondary Structure SYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKS CCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC TLITDWLVRDKIKHAWLSIEDEDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPI HHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH NVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYLLEHLPLDFKLVIISRQDPPI HHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC PLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLA CHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEECHHHHHHHHCCCHHHHHHHHHC GLSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSIC CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH NRLTEDSNSKSVITELDKGNHFIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAA HHHCCCCCCCHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHH SWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKGEVETLLEYLEYLPEKRLKKN HHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCC SKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMA CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHH EKAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH NLAVNLNWLGQRKEAVLICENSLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSY HHHHCCEECCCCCCEEEEECCCHHHHHCCCCCEEEHHHHHHHHHHHEEECCCHHHHHHHH LQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEFVEEIINLGKQLGLKGLIFFM HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH NCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSIL HHHCCCEEEEECCCCCCEEEHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH SRINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVI HHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHH YKLLSEVKDVSPAFITGILEAFDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAK HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHH KLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAAPGPEENL EEEEEECCCEEEHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA