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The map label for this gene is araQ [H]

Identifier: 220932882

GI number: 220932882

Start: 2213864

End: 2214739

Strand: Reverse

Name: araQ [H]

Synonym: Hore_20500

Alternate gene names: 220932882

Gene position: 2214739-2213864 (Counterclockwise)

Preceding gene: 220932883

Following gene: 220932881

Centisome position: 85.9

GC content: 40.07

Gene sequence:

>876_bases
TTGCCTATTGTTCCCACAACAACAGGAGTAAAGAAGAGAAAGGTAGCCCCAAAAAAGTCAGGTTTTAAACAGTGGATTAT
TTTTGCTATTATCCTGAGTTTTGTTCTGGTCTGGTTATTACCCATCTTCGGAGCAATAGTAACTTCATTGAGGTCAATGG
ATGATCTGCTCACAAATGGTTTCTGGAGCAGGCCCCGGAGTTTAAGCCTGGTTAATTTTGCAAAAGCCTGGTCTGAAGGT
ATGGTGGGCAGGTATCTGTATAACAGTTTTGTGGTAACTATACCGGCCCTGATAGGAACCCTGTTTTTATCTTCCCTGAC
AGGGTATGCCCTTGCTCATTATAAGTTTAAGGGTAATATTATAATTTATTTGACTTTTGTAGGTGGGATGTTGATTCCCT
TTCAGATTTTAATGATTCCTGTCTTTAAACTTTCTAATACCCTCGGTATTTATAATACTTACTGGGGGCTGGTTATGATC
CATATGGTTTTTCAGATGGGATTTTGTACCTTTTTCTTGAGAAACTTTATGAAGACTATCCCCTATGAGCTATCAGAAGC
AGCCAGAATAGATGGTTGCTCAGAGTTTATGATATTCTGGAAGATTTATCTCCCCTTATCAAAACCTGCCCTGGCAGCGG
TTGGCACCTTAGAGTTTACCTGGATTTTTAATGATTATCTCTGGGCTCTTGTCCTTATCAGGAATGATAGTTTTAAACCG
GTTACGGCCGGGCTGGCAACATTGAAGGGTCATTTTATAGCTTCATGGAATGTGCTTGTGGCCGGTTCATTACTGGCTTC
AATTCCAACACTGATTGTGTTTATATTTCTGCAGAGGTACTTTATTGAAGGTTTAACAATGGGATCCGGCAAATAA

Upstream 100 bases:

>100_bases
ATGGGCTATGGGGCCAGCATTGCCGTGATCTTATTCCTGATTATGTTTGGCTTTATTATCATTTATTTGAAGCAGGTCAT
GAAAGATGAGGTGAATTAAA

Downstream 100 bases:

>100_bases
AAAACTAGTTTAGGTATTGCAAACAGTGATTTTTGTGGATAACAGGGGAGGTTATTTTTAATGAAACGGAAAATATTAAA
CTTTAATACGGACTGGTTTT

Product: Monosaccharide-transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MPIVPTTTGVKKRKVAPKKSGFKQWIIFAIILSFVLVWLLPIFGAIVTSLRSMDDLLTNGFWSRPRSLSLVNFAKAWSEG
MVGRYLYNSFVVTIPALIGTLFLSSLTGYALAHYKFKGNIIIYLTFVGGMLIPFQILMIPVFKLSNTLGIYNTYWGLVMI
HMVFQMGFCTFFLRNFMKTIPYELSEAARIDGCSEFMIFWKIYLPLSKPALAAVGTLEFTWIFNDYLWALVLIRNDSFKP
VTAGLATLKGHFIASWNVLVAGSLLASIPTLIVFIFLQRYFIEGLTMGSGK

Sequences:

>Translated_291_residues
MPIVPTTTGVKKRKVAPKKSGFKQWIIFAIILSFVLVWLLPIFGAIVTSLRSMDDLLTNGFWSRPRSLSLVNFAKAWSEG
MVGRYLYNSFVVTIPALIGTLFLSSLTGYALAHYKFKGNIIIYLTFVGGMLIPFQILMIPVFKLSNTLGIYNTYWGLVMI
HMVFQMGFCTFFLRNFMKTIPYELSEAARIDGCSEFMIFWKIYLPLSKPALAAVGTLEFTWIFNDYLWALVLIRNDSFKP
VTAGLATLKGHFIASWNVLVAGSLLASIPTLIVFIFLQRYFIEGLTMGSGK
>Mature_290_residues
PIVPTTTGVKKRKVAPKKSGFKQWIIFAIILSFVLVWLLPIFGAIVTSLRSMDDLLTNGFWSRPRSLSLVNFAKAWSEGM
VGRYLYNSFVVTIPALIGTLFLSSLTGYALAHYKFKGNIIIYLTFVGGMLIPFQILMIPVFKLSNTLGIYNTYWGLVMIH
MVFQMGFCTFFLRNFMKTIPYELSEAARIDGCSEFMIFWKIYLPLSKPALAAVGTLEFTWIFNDYLWALVLIRNDSFKPV
TAGLATLKGHFIASWNVLVAGSLLASIPTLIVFIFLQRYFIEGLTMGSGK

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=231, Percent_Identity=32.4675324675325, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1787571, Length=260, Percent_Identity=28.0769230769231, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1790464, Length=298, Percent_Identity=26.510067114094, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787368, Length=141, Percent_Identity=36.1702127659575, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32819; Mature: 32688

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIVPTTTGVKKRKVAPKKSGFKQWIIFAIILSFVLVWLLPIFGAIVTSLRSMDDLLTNG
CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FWSRPRSLSLVNFAKAWSEGMVGRYLYNSFVVTIPALIGTLFLSSLTGYALAHYKFKGNI
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCE
IIYLTFVGGMLIPFQILMIPVFKLSNTLGIYNTYWGLVMIHMVFQMGFCTFFLRNFMKTI
EEEHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PYELSEAARIDGCSEFMIFWKIYLPLSKPALAAVGTLEFTWIFNDYLWALVLIRNDSFKP
CHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCEEEEEHHHHHHHHHHHEECCCCCH
VTAGLATLKGHFIASWNVLVAGSLLASIPTLIVFIFLQRYFIEGLTMGSGK
HHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PIVPTTTGVKKRKVAPKKSGFKQWIIFAIILSFVLVWLLPIFGAIVTSLRSMDDLLTNG
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FWSRPRSLSLVNFAKAWSEGMVGRYLYNSFVVTIPALIGTLFLSSLTGYALAHYKFKGNI
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCE
IIYLTFVGGMLIPFQILMIPVFKLSNTLGIYNTYWGLVMIHMVFQMGFCTFFLRNFMKTI
EEEHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PYELSEAARIDGCSEFMIFWKIYLPLSKPALAAVGTLEFTWIFNDYLWALVLIRNDSFKP
CHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCEEEEEHHHHHHHHHHHEECCCCCH
VTAGLATLKGHFIASWNVLVAGSLLASIPTLIVFIFLQRYFIEGLTMGSGK
HHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]