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The map label for this gene is yurN [H]

Identifier: 220932883

GI number: 220932883

Start: 2214741

End: 2215613

Strand: Reverse

Name: yurN [H]

Synonym: Hore_20510

Alternate gene names: 220932883

Gene position: 2215613-2214741 (Counterclockwise)

Preceding gene: 220932884

Following gene: 220932882

Centisome position: 85.94

GC content: 38.95

Gene sequence:

>873_bases
ATGAACAAACATCGTCAAAAAATAGCCTGGTTTTTTTTAAGTATTCCTTTAATTTTATATGTAATCTGGGTTATTGGCCC
TACCCTGTATACGTTTTTCCTAAGTTTGACCAGGTATGATGGCCTGGGAGCACCCAGGTTCAGAGGTATTAAGAATTATA
TAATGCTCTTTGATGATCCTGTCTTTATAGTGTCACTGGTTAATAATATAAAATGGCTGGTTATTTTTATGGTCATTCCT
GTCGTCCTTGGCCTTATTCTGGCATTAATATTAAATAATCAAATAAGGTGGAGTAACGGGTTTAAAGCCTCGATTTATAT
GCCCATGATCCTTTCTCCTGTAGTTATAGGTTTAATCTGGTCCTGGATATATGATCCCTCAGGGGGATTATTAAACTATA
CCCTGACAGCACTCGGTTTAAAGCACCTGACGCGAGGCTGGTTAAGTGATCCCGGGCTTGTTTTATATTGTATAATTGCG
GCTGCTGTCTGGAGACATGTCGGGTATGTAATGATTTTATTTCTGGCTGGATTAAAGACCATTCCAGTCTCGGTACTTGA
GGCGGCTCAGGTTGATGGAGCTGATGGCTGGAAGAGATTCTGGCATATTATATTACCCTTATTAAAACCATCTACGGTAA
TTGTTTTTGTTGTTACCATAATTCAGTCATTCAGGGCCTTTGACATGGTTAATACCATGACTGAAGGTGGGCCCTTTAAC
TCCTCAAATGTCCTGGCTAATTTTATGTATCTTGAAGCTTTCAGGAATTATAGAATGGGCTATGGGGCCAGCATTGCCGT
GATCTTATTCCTGATTATGTTTGGCTTTATTATCATTTATTTGAAGCAGGTCATGAAAGATGAGGTGAATTAA

Upstream 100 bases:

>100_bases
TTCAGAACAGGAATAACAATTGAAACGGGAAGAGGGACCTTCCCTCTTCCCAATTTATACTTATAAGAAGCAGCAAATCC
TAATAAAGGCTGGTGGAAAT

Downstream 100 bases:

>100_bases
ATTGCCTATTGTTCCCACAACAACAGGAGTAAAGAAGAGAAAGGTAGCCCCAAAAAAGTCAGGTTTTAAACAGTGGATTA
TTTTTGCTATTATCCTGAGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNKHRQKIAWFFLSIPLILYVIWVIGPTLYTFFLSLTRYDGLGAPRFRGIKNYIMLFDDPVFIVSLVNNIKWLVIFMVIP
VVLGLILALILNNQIRWSNGFKASIYMPMILSPVVIGLIWSWIYDPSGGLLNYTLTALGLKHLTRGWLSDPGLVLYCIIA
AAVWRHVGYVMILFLAGLKTIPVSVLEAAQVDGADGWKRFWHIILPLLKPSTVIVFVVTIIQSFRAFDMVNTMTEGGPFN
SSNVLANFMYLEAFRNYRMGYGASIAVILFLIMFGFIIIYLKQVMKDEVN

Sequences:

>Translated_290_residues
MNKHRQKIAWFFLSIPLILYVIWVIGPTLYTFFLSLTRYDGLGAPRFRGIKNYIMLFDDPVFIVSLVNNIKWLVIFMVIP
VVLGLILALILNNQIRWSNGFKASIYMPMILSPVVIGLIWSWIYDPSGGLLNYTLTALGLKHLTRGWLSDPGLVLYCIIA
AAVWRHVGYVMILFLAGLKTIPVSVLEAAQVDGADGWKRFWHIILPLLKPSTVIVFVVTIIQSFRAFDMVNTMTEGGPFN
SSNVLANFMYLEAFRNYRMGYGASIAVILFLIMFGFIIIYLKQVMKDEVN
>Mature_290_residues
MNKHRQKIAWFFLSIPLILYVIWVIGPTLYTFFLSLTRYDGLGAPRFRGIKNYIMLFDDPVFIVSLVNNIKWLVIFMVIP
VVLGLILALILNNQIRWSNGFKASIYMPMILSPVVIGLIWSWIYDPSGGLLNYTLTALGLKHLTRGWLSDPGLVLYCIIA
AAVWRHVGYVMILFLAGLKTIPVSVLEAAQVDGADGWKRFWHIILPLLKPSTVIVFVVTIIQSFRAFDMVNTMTEGGPFN
SSNVLANFMYLEAFRNYRMGYGASIAVILFLIMFGFIIIYLKQVMKDEVN

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=270, Percent_Identity=27.037037037037, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787570, Length=241, Percent_Identity=29.4605809128631, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790465, Length=251, Percent_Identity=27.8884462151394, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33001; Mature: 33001

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]