| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932866
Identifier: 220932866
GI number: 220932866
Start: 2194318
End: 2194626
Strand: Reverse
Name: 220932866
Synonym: Hore_20340
Alternate gene names: NA
Gene position: 2194626-2194318 (Counterclockwise)
Preceding gene: 220932867
Following gene: 220932865
Centisome position: 85.12
GC content: 35.28
Gene sequence:
>309_bases ATGGACGAGGAAATACTGAGTGCCCTGGCCTATTTTCAGGAACAGATAGAGGAATTATCTTTTAAGTTTCAGAAGTTAAA GGATATAACCTACAATTTATATAAAGAGAATCAGACTCTCCGGGAAGAGAATGAAGAGTTGAAGAAGATTGTTTTTGACA GAAAGAATGAGCAATCCCGGGAAGGTTATTCAAATCTTATCCATCTTTATAATGAAGGCTATCATGTCTGTCATTTAAGT TTTGGAGAAAAAAGAAAAGGTGACTGTCTCTTTTGTTTGCAGTTGTTAGAAAACCAGATAGAGGAGTAA
Upstream 100 bases:
>100_bases AAGTTGACCTTGAAGAAACCGATGTTGAGATTGATAGACCGATGAAAATAGTAGTGGCAAAGGTAATGAAAGGGAGCAAA AATGAATGGGGTGACCATTG
Downstream 100 bases:
>100_bases TTCTATTATGGAAGAAGTAAATGATTTAATACCGGGAAAACTTCAGATTATACAGGATACAGATTATTTTAAATTTGGAA CAGATTCCGTGCTCCTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MDEEILSALAYFQEQIEELSFKFQKLKDITYNLYKENQTLREENEELKKIVFDRKNEQSREGYSNLIHLYNEGYHVCHLS FGEKRKGDCLFCLQLLENQIEE
Sequences:
>Translated_102_residues MDEEILSALAYFQEQIEELSFKFQKLKDITYNLYKENQTLREENEELKKIVFDRKNEQSREGYSNLIHLYNEGYHVCHLS FGEKRKGDCLFCLQLLENQIEE >Mature_102_residues MDEEILSALAYFQEQIEELSFKFQKLKDITYNLYKENQTLREENEELKKIVFDRKNEQSREGYSNLIHLYNEGYHVCHLS FGEKRKGDCLFCLQLLENQIEE
Specific function: Involved in initiation control of chromosome replication [H]
COG id: COG4467
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yabA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010377 [H]
Pfam domain/function: PF06156 DUF972 [H]
EC number: NA
Molecular weight: Translated: 12331; Mature: 12331
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEEILSALAYFQEQIEELSFKFQKLKDITYNLYKENQTLREENEELKKIVFDRKNEQSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH EGYSNLIHLYNEGYHVCHLSFGEKRKGDCLFCLQLLENQIEE HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDEEILSALAYFQEQIEELSFKFQKLKDITYNLYKENQTLREENEELKKIVFDRKNEQSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH EGYSNLIHLYNEGYHVCHLSFGEKRKGDCLFCLQLLENQIEE HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA