Click here to switch to the map view.

The map label for this gene is yabB [H]

Identifier: 220932865

GI number: 220932865

Start: 2193570

End: 2194310

Strand: Reverse

Name: yabB [H]

Synonym: Hore_20330

Alternate gene names: 220932865

Gene position: 2194310-2193570 (Counterclockwise)

Preceding gene: 220932866

Following gene: 220932864

Centisome position: 85.11

GC content: 42.11

Gene sequence:

>741_bases
ATGGAAGAAGTAAATGATTTAATACCGGGAAAACTTCAGATTATACAGGATACAGATTATTTTAAATTTGGAACAGATTC
CGTGCTCCTGGCCAATTTTGTAAAGGTTAAGGATGGTGAATCTGTTGTTGACCTGGGTAGTGGCAGTGGAGTAATTCCAC
TGCTTTTGGCTTTCAAACAGAAGCCTGGCCGGGTTATTGGCCTGGAAATACTCCCCGAATTGGTTCAGCTTTCTAAAAAG
AGTGCCCGGATGAATGGGCTGGAAGAAATTATTGAATTTATCGAAGGGGATATAAAGGAGATAGATGACTATATAGAATT
AGAAAGTGTTGATCTGGTGGTCTGTAACCCTCCCTATATGCCTCCTGACAAGGGAAAGATTACTAAAAACAGGGAAAAGG
CTATTGCCAGGCATGAAATACTTATAACCCTGAAAGACGTTATTAAACAGGGTTCCCGGGTCTTAAGACTGGGGGGAAGG
ATGGCCATGGTTCACAGGACCTGGCGTTTGCCGGAAATTATAACCCTGATGAGGGAAAATAAACTGGAGCCGAAAAGGCT
CTGTTTTGTTCAGTCCCGGGAAAATTTGAATCCCAAAACCGTTCTGATTGAGGCTAAAAAAGGGGGAGGTCTCGGTCTTG
AGGTTGAACCCAATTTAGTGGTCTATAAAGGGAATACTCAGGAGTATACTGATACTGTTAAGAGAATGTACGGTTACAGC
GGGGATGATTATAATGAATAA

Upstream 100 bases:

>100_bases
GGCTATCATGTCTGTCATTTAAGTTTTGGAGAAAAAAGAAAAGGTGACTGTCTCTTTTGTTTGCAGTTGTTAGAAAACCA
GATAGAGGAGTAATTCTATT

Downstream 100 bases:

>100_bases
AATAGGGAAGCTATATATATGTGGGACTCCGCTGGGCAACCTCGAGGATATCTCCTTCAGGGCTATAAAAACCCTGAAGG
AGGTTGATTTAGTTGCGGCT

Product: methyltransferase small

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MEEVNDLIPGKLQIIQDTDYFKFGTDSVLLANFVKVKDGESVVDLGSGSGVIPLLLAFKQKPGRVIGLEILPELVQLSKK
SARMNGLEEIIEFIEGDIKEIDDYIELESVDLVVCNPPYMPPDKGKITKNREKAIARHEILITLKDVIKQGSRVLRLGGR
MAMVHRTWRLPEIITLMRENKLEPKRLCFVQSRENLNPKTVLIEAKKGGGLGLEVEPNLVVYKGNTQEYTDTVKRMYGYS
GDDYNE

Sequences:

>Translated_246_residues
MEEVNDLIPGKLQIIQDTDYFKFGTDSVLLANFVKVKDGESVVDLGSGSGVIPLLLAFKQKPGRVIGLEILPELVQLSKK
SARMNGLEEIIEFIEGDIKEIDDYIELESVDLVVCNPPYMPPDKGKITKNREKAIARHEILITLKDVIKQGSRVLRLGGR
MAMVHRTWRLPEIITLMRENKLEPKRLCFVQSRENLNPKTVLIEAKKGGGLGLEVEPNLVVYKGNTQEYTDTVKRMYGYS
GDDYNE
>Mature_246_residues
MEEVNDLIPGKLQIIQDTDYFKFGTDSVLLANFVKVKDGESVVDLGSGSGVIPLLLAFKQKPGRVIGLEILPELVQLSKK
SARMNGLEEIIEFIEGDIKEIDDYIELESVDLVVCNPPYMPPDKGKITKNREKAIARHEILITLKDVIKQGSRVLRLGGR
MAMVHRTWRLPEIITLMRENKLEPKRLCFVQSRENLNPKTVLIEAKKGGGLGLEVEPNLVVYKGNTQEYTDTVKRMYGYS
GDDYNE

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 27747; Mature: 27747

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEVNDLIPGKLQIIQDTDYFKFGTDSVLLANFVKVKDGESVVDLGSGSGVIPLLLAFKQ
CCCHHHHCCCEEEEEECCCCEEECCCCEEEHHEEEECCCCCEEEECCCCCHHHHHHHHCC
KPGRVIGLEILPELVQLSKKSARMNGLEEIIEFIEGDIKEIDDYIELESVDLVVCNPPYM
CCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHEEECCEEEEECCCCC
PPDKGKITKNREKAIARHEILITLKDVIKQGSRVLRLGGRMAMVHRTWRLPEIITLMREN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCEEEEHHHCCCHHHHHHHHHC
KLEPKRLCFVQSRENLNPKTVLIEAKKGGGLGLEVEPNLVVYKGNTQEYTDTVKRMYGYS
CCCHHHEEEECCCCCCCCEEEEEEECCCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCC
GDDYNE
CCCCCC
>Mature Secondary Structure
MEEVNDLIPGKLQIIQDTDYFKFGTDSVLLANFVKVKDGESVVDLGSGSGVIPLLLAFKQ
CCCHHHHCCCEEEEEECCCCEEECCCCEEEHHEEEECCCCCEEEECCCCCHHHHHHHHCC
KPGRVIGLEILPELVQLSKKSARMNGLEEIIEFIEGDIKEIDDYIELESVDLVVCNPPYM
CCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHEEECCEEEEECCCCC
PPDKGKITKNREKAIARHEILITLKDVIKQGSRVLRLGGRMAMVHRTWRLPEIITLMREN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCEEEEHHHCCCHHHHHHHHHC
KLEPKRLCFVQSRENLNPKTVLIEAKKGGGLGLEVEPNLVVYKGNTQEYTDTVKRMYGYS
CCCHHHEEEECCCCCCCCEEEEEEECCCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCC
GDDYNE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]