| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932845
Identifier: 220932845
GI number: 220932845
Start: 2167524
End: 2168867
Strand: Reverse
Name: 220932845
Synonym: Hore_20110
Alternate gene names: NA
Gene position: 2168867-2167524 (Counterclockwise)
Preceding gene: 220932848
Following gene: 220932844
Centisome position: 84.13
GC content: 37.87
Gene sequence:
>1344_bases ATGCTGTGGCAGTTTGACTTTCTTACTCAGTATGTTAAGATAAATCACCGTATAATAATTTATTTTAAACTGGAGGGTCA AACTAACACAGTTACAATGTCACAATTAACAAATTATGTTCATCGTATCAGGAATTTTTCTGTTAATGCCAGGAGTTTTC TCGGTTGTGTTGTCCTTAGTTTTATCAGTCTCGGGGCTATGCAGGTCATTTTAGGTTTGTATTTTTTAGAGCTGGGTTAT ACAGAGAGTTTTGTAGGTAAAGCGGTAGCTGCCCGGACTCTGGCTACAGGTATCCTGGCTATTCCCGCGGGAGCTTTAAT TGAGAAGATGGGACCAAAAAGGATATTATTAATGGCCAGTTTTCTAATAGGGAGCTCTTTAATCGTCCAGGGAATTACTT CCAACAAGATTATTTTAATAGGGGCAAATCTTATATATGGTTCAGCCTTTGCTATTTTATTGGTAATGATGGCTCCTTTT CTGTCTAACAATAGTGATGATAATGAAAGGGAGGAATTATTTAGCTTTAATTTTATCTTGATGACTGCAGCCAGAACAAT CGGTACCCTTTTAGTTGGGTTTTTACCACCACTTTTTTTCAATACTATATTAGCAGGTAAAACAAATACAGTTCTGGCCT ATCAATATGTCTTAATTACACTGGGAATTATTTCTCTGGGGGCAATAATTCCAGCCCTGTTTATTTATGAAAAGGAAAAT AAATTTAATTGCAGTAAAAAGAAAGCAAGATTAGTCACTAGTCTGAAGAAAAAACGTATCAGGAGATTGAGTCTCTACCA GTTGTTTTTTGGTATCGGTAGTGGAATGATTGCTCCCTTTTTTAGTGTTTTTCTTGCTAAAAATCTGGGGGCTGGGTCTG AAAGAGTAAGTACTATAATGTTTTTATACAGGGCTGCTATAGCTCTTGCTTTATTTCTAACTCCGCTCCTTACCAACAAA TTCGGGAAAGTAAAATCGGTCGGAGTGGCCCAGTTTGGTTCCCTACCTTTCCTTCTGGCAATAGTTCTTGTACCGAATTT TGCCGTTGTCAGTATGGCTTTTTTATTACGGGGAGCTTTAGTAAATATGGCCCGGCCAATAGCTTCTGATTTTGCTATGG AGATAACACCTGATACCCAGCAGACAATAGCCAGTAGCCTTATGAGAACCAGTAAAAGTATTGCCCATGGAGGTAGTGCC ACAGCTGCTGGCTGGATTATAAACCACTTTGGATATCAGGCTACTTACTTCCTGACTTTCTGTTTTTATTTTATAAGTGC CTTACTTTTTGTAAAATCGTTCAGAGAACTGGAACAGAAAGAACTACAATATAGAACCGGTTAA
Upstream 100 bases:
>100_bases GTATGACAAATAATCTTACGAAGCATAAACCTGAATATCGTCATTTATTGAAGGATTACAGGGGTAGAAAGAGTTGAGTA TAACCAGAAAAAAATAATTG
Downstream 100 bases:
>100_bases AAACAAAAACGGAATATAATACTAAAGTATAATGTTAAAGATATTATGATTGCTATAATTCCAGATAACCCTGGTCCCGG GTAAAAACACGGGCCAGGGT
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Protein; MFS Transporter; Permease; Multidrug Resistance Protein; Permease Of Facilitator Superfamily; Sugar Transporter Protein; Transporter Facilitator Family; Multidrug-Efflux Transporter
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MLWQFDFLTQYVKINHRIIIYFKLEGQTNTVTMSQLTNYVHRIRNFSVNARSFLGCVVLSFISLGAMQVILGLYFLELGY TESFVGKAVAARTLATGILAIPAGALIEKMGPKRILLMASFLIGSSLIVQGITSNKIILIGANLIYGSAFAILLVMMAPF LSNNSDDNEREELFSFNFILMTAARTIGTLLVGFLPPLFFNTILAGKTNTVLAYQYVLITLGIISLGAIIPALFIYEKEN KFNCSKKKARLVTSLKKKRIRRLSLYQLFFGIGSGMIAPFFSVFLAKNLGAGSERVSTIMFLYRAAIALALFLTPLLTNK FGKVKSVGVAQFGSLPFLLAIVLVPNFAVVSMAFLLRGALVNMARPIASDFAMEITPDTQQTIASSLMRTSKSIAHGGSA TAAGWIINHFGYQATYFLTFCFYFISALLFVKSFRELEQKELQYRTG
Sequences:
>Translated_447_residues MLWQFDFLTQYVKINHRIIIYFKLEGQTNTVTMSQLTNYVHRIRNFSVNARSFLGCVVLSFISLGAMQVILGLYFLELGY TESFVGKAVAARTLATGILAIPAGALIEKMGPKRILLMASFLIGSSLIVQGITSNKIILIGANLIYGSAFAILLVMMAPF LSNNSDDNEREELFSFNFILMTAARTIGTLLVGFLPPLFFNTILAGKTNTVLAYQYVLITLGIISLGAIIPALFIYEKEN KFNCSKKKARLVTSLKKKRIRRLSLYQLFFGIGSGMIAPFFSVFLAKNLGAGSERVSTIMFLYRAAIALALFLTPLLTNK FGKVKSVGVAQFGSLPFLLAIVLVPNFAVVSMAFLLRGALVNMARPIASDFAMEITPDTQQTIASSLMRTSKSIAHGGSA TAAGWIINHFGYQATYFLTFCFYFISALLFVKSFRELEQKELQYRTG >Mature_447_residues MLWQFDFLTQYVKINHRIIIYFKLEGQTNTVTMSQLTNYVHRIRNFSVNARSFLGCVVLSFISLGAMQVILGLYFLELGY TESFVGKAVAARTLATGILAIPAGALIEKMGPKRILLMASFLIGSSLIVQGITSNKIILIGANLIYGSAFAILLVMMAPF LSNNSDDNEREELFSFNFILMTAARTIGTLLVGFLPPLFFNTILAGKTNTVLAYQYVLITLGIISLGAIIPALFIYEKEN KFNCSKKKARLVTSLKKKRIRRLSLYQLFFGIGSGMIAPFFSVFLAKNLGAGSERVSTIMFLYRAAIALALFLTPLLTNK FGKVKSVGVAQFGSLPFLLAIVLVPNFAVVSMAFLLRGALVNMARPIASDFAMEITPDTQQTIASSLMRTSKSIAHGGSA TAAGWIINHFGYQATYFLTFCFYFISALLFVKSFRELEQKELQYRTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49391; Mature: 49391
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWQFDFLTQYVKINHRIIIYFKLEGQTNTVTMSQLTNYVHRIRNFSVNARSFLGCVVLS CCEEHHHHHHHHHHCCEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHH FISLGAMQVILGLYFLELGYTESFVGKAVAARTLATGILAIPAGALIEKMGPKRILLMAS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHH FLIGSSLIVQGITSNKIILIGANLIYGSAFAILLVMMAPFLSNNSDDNEREELFSFNFIL HHHCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH MTAARTIGTLLVGFLPPLFFNTILAGKTNTVLAYQYVLITLGIISLGAIIPALFIYEKEN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC KFNCSKKKARLVTSLKKKRIRRLSLYQLFFGIGSGMIAPFFSVFLAKNLGAGSERVSTIM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH FLYRAAIALALFLTPLLTNKFGKVKSVGVAQFGSLPFLLAIVLVPNFAVVSMAFLLRGAL HHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHH VNMARPIASDFAMEITPDTQQTIASSLMRTSKSIAHGGSATAAGWIINHFGYQATYFLTF HHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHH CFYFISALLFVKSFRELEQKELQYRTG HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLWQFDFLTQYVKINHRIIIYFKLEGQTNTVTMSQLTNYVHRIRNFSVNARSFLGCVVLS CCEEHHHHHHHHHHCCEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHH FISLGAMQVILGLYFLELGYTESFVGKAVAARTLATGILAIPAGALIEKMGPKRILLMAS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHH FLIGSSLIVQGITSNKIILIGANLIYGSAFAILLVMMAPFLSNNSDDNEREELFSFNFIL HHHCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH MTAARTIGTLLVGFLPPLFFNTILAGKTNTVLAYQYVLITLGIISLGAIIPALFIYEKEN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC KFNCSKKKARLVTSLKKKRIRRLSLYQLFFGIGSGMIAPFFSVFLAKNLGAGSERVSTIM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH FLYRAAIALALFLTPLLTNKFGKVKSVGVAQFGSLPFLLAIVLVPNFAVVSMAFLLRGAL HHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHH VNMARPIASDFAMEITPDTQQTIASSLMRTSKSIAHGGSATAAGWIINHFGYQATYFLTF HHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHH CFYFISALLFVKSFRELEQKELQYRTG HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA