| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is crh [H]
Identifier: 220932848
GI number: 220932848
Start: 2173343
End: 2173627
Strand: Reverse
Name: crh [H]
Synonym: Hore_20160
Alternate gene names: 220932848
Gene position: 2173627-2173343 (Counterclockwise)
Preceding gene: 220932849
Following gene: 220932845
Centisome position: 84.31
GC content: 35.79
Gene sequence:
>285_bases ATGGAAAAAAATTCAGTTGTTAAGCAGAAAGTAGTAGTAGCCAATAAAACAGGTTTACATGCTCGACCGGCTTCTATGTT TGTGGAGATGGCAAAAAAGTATGATGCAGACATCAAGGTAGTTAAAGATTCCCAGGAAATTAATGCTAAAAGTATTATTG GCCTAATGAGTTTAGGAATTGATCAGAATACTGAAATAACTATTCTGGCAAAGGGAGCAGATGCCAGTCAAGCAGTTGAT GCTCTGGTTGGTTTAATAGAAGATAAATTTGGAGAAAAGAACTAA
Upstream 100 bases:
>100_bases AGAAGAAATGTTAATTAAGTAATAATAATCTTTCACTAGCGTTGCATCGTGTTTTATTTACTAAAATATTTTTATTAATT TTATATAAGAGGTGAGTTTA
Downstream 100 bases:
>100_bases GGAGTTGATAAGATGAGTAGAGACCTAACAGGAGTAGCAGCTTCACCGGGAATTTCAATTGGCAAAGTAGTAATTATGAA TGATGAAGACTTATCTTATT
Product: Phosphotransferase system, phosphocarrier protein HPr
Products: D-sorbitol 6-phosphate [Cytoplasm]; pyruvate; alpha,alpha-trehalose 6-phosphate [Cytoplasm]; mannitol-1-phosphate [Cytoplasm]; D-glucosamine-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; galactitol-1-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm]; fructose-1-phosphate [Cytoplasm]; glucose-6-phosphate [Cytoplasm]; mannitol-1-phosphate [Cytoplasm]; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm]; salicin-6-phosphate [Cytoplasm]; arbutin-6-phosphate [Cytoplasm] [C]
Alternate protein names: Catabolite repression HPr [H]
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MEKNSVVKQKVVVANKTGLHARPASMFVEMAKKYDADIKVVKDSQEINAKSIIGLMSLGIDQNTEITILAKGADASQAVD ALVGLIEDKFGEKN
Sequences:
>Translated_94_residues MEKNSVVKQKVVVANKTGLHARPASMFVEMAKKYDADIKVVKDSQEINAKSIIGLMSLGIDQNTEITILAKGADASQAVD ALVGLIEDKFGEKN >Mature_94_residues MEKNSVVKQKVVVANKTGLHARPASMFVEMAKKYDADIKVVKDSQEINAKSIIGLMSLGIDQNTEITILAKGADASQAVD ALVGLIEDKFGEKN
Specific function: Along with seryl-phosphorylated HPr, phosphorylated crh is implicated in carbon catabolite repression (CCR) of levanase, inositol dehydrogenase, and beta-xylosidase. It seems to exert its effect on CCR by interacting with CcpA [H]
COG id: COG1925
COG function: function code G; Phosphotransferase system, HPr-related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPr domain [H]
Homologues:
Organism=Escherichia coli, GI1788755, Length=83, Percent_Identity=38.5542168674699, Blast_Score=67, Evalue=2e-13,
Paralogues:
None
Copy number: 4180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 2100 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 3235 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR002114 [H]
Pfam domain/function: PF00381 PTS-HPr [H]
EC number: NA
Molecular weight: Translated: 10118; Mature: 10118
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: PS00369 PTS_HPR_HIS ; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNSVVKQKVVVANKTGLHARPASMFVEMAKKYDADIKVVKDSQEINAKSIIGLMSLGI CCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCC DQNTEITILAKGADASQAVDALVGLIEDKFGEKN CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEKNSVVKQKVVVANKTGLHARPASMFVEMAKKYDADIKVVKDSQEINAKSIIGLMSLGI CCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCC DQNTEITILAKGADASQAVDALVGLIEDKFGEKN CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sorbitol [Periplasm]; phosphoenolpyruvate; trehalose [Periplasm]; mannitol [Periplasm]; glucosamine [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; galactitol [Periplasm]; fructose [Periplasm]; beta-D-glucose [Periplasm]; diacetylchitobiose [Periplasm]; cellobiose [Periplasm]; salicin [Periplasm]; arbutin [Periplasm] [C]
Specific reaction: phosphoenolpyruvate + sorbitol [Periplasm] = D-sorbitol 6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + trehalose [Periplasm] = alpha,alpha-trehalose 6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + mannitol [Periplasm] = mannitol-1-phosp
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 9237995; 11916384 [H]