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The map label for this gene is ndvB [H]

Identifier: 220932809

GI number: 220932809

Start: 2123239

End: 2125698

Strand: Reverse

Name: ndvB [H]

Synonym: Hore_19750

Alternate gene names: 220932809

Gene position: 2125698-2123239 (Counterclockwise)

Preceding gene: 220932810

Following gene: 220932808

Centisome position: 82.45

GC content: 38.74

Gene sequence:

>2460_bases
ATGAAATACGGGTATTTTGATGACCGGGCCAGGGAATATGTAATTAATAATCCAGAAACTCCGTATCCCTGGATAAATTA
TCTGGGTTCAAAAAATTATTTCTGTCTTCTTTCCAATACTGCAGGAGGGTATAGTTTTTACAAGGATGCCAGATTACTCA
GGATTACCAGATATCGATACAATAATGTTCCGATTGATGCAGGTGGTAAGTATTACTATATATATGAAGACGGAGAATAC
TGGTCCCCTACCTGGGCTCCGGTTAAGGCAAAGCTTGATTACTACCAGTGTCAGCATGGCCTGGGTTATAGTGTAATAAC
CGGTGAACGGAAAAACATTTCAACTGAAATATTATATTTTGTTCCAGTAGATGATAACTGTGAAATACACCGTTTAAAAA
TAAAAAATAATGGTTCATCTGTTAGAAAAATAAAACTGTTTTCCTTTGTTGAGTTTTGTCTCTGGGATGCATATGATGAT
ATGACTAATTTCCAGAGGAACTTAAGTACTGGTGAGGTAGAAGTAGAGGGTTCAACCATATTCCATAAAACAGAATATAG
AGAGAGGAGAAACCATTTTTCCTTTTTTACAGTCAATAGTAATATTTCAGGTTTTGATACCGATAGGGAATCATTTATAG
GTCTGTATAACGGTTTCCATGAACCACAGGTTGTTGTCAGTGGCAGACCAGGTAATTCTATTGCCAGTGGGTGGTCACCA
ATTGGCTCACACTGCCTGGAAATAGTATTACAACCGGGTGAAGAACAAAGTTATATTTTTATACTTGGCTTTATGGAAAA
TAATCCTGATAACAAGTGGTCTTCATGCGGGGGAATTAATAAAGATAAAGCCTATAGTATGATCAGGCGCTATAATTCTG
ATATCAAAGTTGACAATGCATTGCAACAGCTTAAATCTTACTGGGATGACCTCCTTTCAGGCTTTTATCTTGAATCTGGT
GATGACAGGTTAGACAGGATGGTTAATACCTGGAATCAATATCAGTGTATGGTTACCTTTAATCTGGCCAGGAGTGCATC
ATATTTCGAATCAGGTATTAGTAGAGGAATAGGATTTAGGGATTCCAATCAGGACCTTCTGGGGGTTGTTCACATGGTTC
CTGAAAGGGCAAGAGAAAGGTTGATAGATCTGGCCCGTACACAGTTTGAGGACGGGAGCACGTACCATCAATACCAGCCC
CTTACCAAAGAAGGTAATAATGAAATAGGAAGTGGGTTTAATGATGACCCCTTATGGCTAATTTTAGGTACTGCAGCTTA
TATCAAGGAAACCGGCGATATTTCTATTCTTAATGAAGAGGTTAGCTTTAATAATGGTAAGGAGGCAACTTTATTTGATC
ATTTACTGGCATCATTTAACCATGTTGTCTTAAATAAGGGGCCGCATGGATTGCCATTGATTGGCAGGGCTGACTGGAAT
GATTGTTTAAACTTAAATTGTTTTTCGACTGACCCTGGAGAGTCATTCCAGACGACAACTAATAAAGATGATGGGCAGGC
TGAATCTGTTCTGATTGCCGGGATGTTTGTGACGATAGGTCCTGAATTTGTTAAGATGTGCAGATTTATCGGTAAAGATG
AAATTGCTGACAGAGCTCAATCAGAAATTGAGGACATGAAAAAGGCAGTAATGGAGCACGGGAGAGACAAAAACTGGTTT
CTGAGGGCATACGATTATTATGGAAATAAGGTTGGTAGTATTGATAACAATGAAGGTCAAATATATATAGAACCTCAGGG
TTTTTGTGTTATGGGGGGGCTGGGTATTGAATCAGGGTTTGCCCGTAAGGCACTTGATTCTGTCAAAGAGAGGCTTGATA
CAGAATATGGCCTTGTATTACTGGATCCGCCCTATAAACAATATTACCCTGAACTTGGTGAAATTTCTTCATACCCGCCT
GGATATAAGGAAAATGGAGGTATTTTCTGTCATGCCAACCCCTGGATAATGATTGCAGAAACAGTCCTGGGGAGAGGGAA
TAATGCGTTTGAATACTATAAAAAGATAGCCCCTGCATATCTTGAAGAAATCAGTGATATCCACAGGATGGAGCCATATG
TATATGCCCAGATGATTGCAGGCAAAGATGCAGTTAACCATGGTGAAGCAAAGAATTCGTGGTTAACCGGAACTGCTGCC
TGGAATTATGTGGCTATCACACATTATATACTGGGAATAAGGCCGGAATATGAAGGTTTGAAAATAGATCCATGTATCCC
TGAAGAATGGTCTGGATTTTATGTAGAGAAGAGATTTAGAGGTAAAGTGTATAAAATTCATGTAAATAACCCTGCAAAAG
TTAGTAAAGGGGTAAAACATATCAAGGTAGATGGAGAAATAATTGAAGGTAATTTAATTAGAATTCCGCTAGAAAATCAA
GCCAGAGAAAATGTCAATGATAATACAACTCAGCACATTGTAGAAGTAATTATGGGCTGA

Upstream 100 bases:

>100_bases
CAGACTTGAAGTATATTATACATAACGTGTAACAGACATAATATCCGTGGCAATAACCTATTAAAACAACTATTAAAGCT
GTTAAAAGGAGTGAACTAAC

Downstream 100 bases:

>100_bases
AAGTATACCTTTGTTCTCTTCTTTAACAGTATTATCAGTGTCAAAAAACTTAGTTAAAGAAGGGGGAGACAATGAAAAGT
AAAAAGAAGACCAATTTTAG

Product: glycosyltransferase 36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 819; Mature: 819

Protein sequence:

>819_residues
MKYGYFDDRAREYVINNPETPYPWINYLGSKNYFCLLSNTAGGYSFYKDARLLRITRYRYNNVPIDAGGKYYYIYEDGEY
WSPTWAPVKAKLDYYQCQHGLGYSVITGERKNISTEILYFVPVDDNCEIHRLKIKNNGSSVRKIKLFSFVEFCLWDAYDD
MTNFQRNLSTGEVEVEGSTIFHKTEYRERRNHFSFFTVNSNISGFDTDRESFIGLYNGFHEPQVVVSGRPGNSIASGWSP
IGSHCLEIVLQPGEEQSYIFILGFMENNPDNKWSSCGGINKDKAYSMIRRYNSDIKVDNALQQLKSYWDDLLSGFYLESG
DDRLDRMVNTWNQYQCMVTFNLARSASYFESGISRGIGFRDSNQDLLGVVHMVPERARERLIDLARTQFEDGSTYHQYQP
LTKEGNNEIGSGFNDDPLWLILGTAAYIKETGDISILNEEVSFNNGKEATLFDHLLASFNHVVLNKGPHGLPLIGRADWN
DCLNLNCFSTDPGESFQTTTNKDDGQAESVLIAGMFVTIGPEFVKMCRFIGKDEIADRAQSEIEDMKKAVMEHGRDKNWF
LRAYDYYGNKVGSIDNNEGQIYIEPQGFCVMGGLGIESGFARKALDSVKERLDTEYGLVLLDPPYKQYYPELGEISSYPP
GYKENGGIFCHANPWIMIAETVLGRGNNAFEYYKKIAPAYLEEISDIHRMEPYVYAQMIAGKDAVNHGEAKNSWLTGTAA
WNYVAITHYILGIRPEYEGLKIDPCIPEEWSGFYVEKRFRGKVYKIHVNNPAKVSKGVKHIKVDGEIIEGNLIRIPLENQ
ARENVNDNTTQHIVEVIMG

Sequences:

>Translated_819_residues
MKYGYFDDRAREYVINNPETPYPWINYLGSKNYFCLLSNTAGGYSFYKDARLLRITRYRYNNVPIDAGGKYYYIYEDGEY
WSPTWAPVKAKLDYYQCQHGLGYSVITGERKNISTEILYFVPVDDNCEIHRLKIKNNGSSVRKIKLFSFVEFCLWDAYDD
MTNFQRNLSTGEVEVEGSTIFHKTEYRERRNHFSFFTVNSNISGFDTDRESFIGLYNGFHEPQVVVSGRPGNSIASGWSP
IGSHCLEIVLQPGEEQSYIFILGFMENNPDNKWSSCGGINKDKAYSMIRRYNSDIKVDNALQQLKSYWDDLLSGFYLESG
DDRLDRMVNTWNQYQCMVTFNLARSASYFESGISRGIGFRDSNQDLLGVVHMVPERARERLIDLARTQFEDGSTYHQYQP
LTKEGNNEIGSGFNDDPLWLILGTAAYIKETGDISILNEEVSFNNGKEATLFDHLLASFNHVVLNKGPHGLPLIGRADWN
DCLNLNCFSTDPGESFQTTTNKDDGQAESVLIAGMFVTIGPEFVKMCRFIGKDEIADRAQSEIEDMKKAVMEHGRDKNWF
LRAYDYYGNKVGSIDNNEGQIYIEPQGFCVMGGLGIESGFARKALDSVKERLDTEYGLVLLDPPYKQYYPELGEISSYPP
GYKENGGIFCHANPWIMIAETVLGRGNNAFEYYKKIAPAYLEEISDIHRMEPYVYAQMIAGKDAVNHGEAKNSWLTGTAA
WNYVAITHYILGIRPEYEGLKIDPCIPEEWSGFYVEKRFRGKVYKIHVNNPAKVSKGVKHIKVDGEIIEGNLIRIPLENQ
ARENVNDNTTQHIVEVIMG
>Mature_819_residues
MKYGYFDDRAREYVINNPETPYPWINYLGSKNYFCLLSNTAGGYSFYKDARLLRITRYRYNNVPIDAGGKYYYIYEDGEY
WSPTWAPVKAKLDYYQCQHGLGYSVITGERKNISTEILYFVPVDDNCEIHRLKIKNNGSSVRKIKLFSFVEFCLWDAYDD
MTNFQRNLSTGEVEVEGSTIFHKTEYRERRNHFSFFTVNSNISGFDTDRESFIGLYNGFHEPQVVVSGRPGNSIASGWSP
IGSHCLEIVLQPGEEQSYIFILGFMENNPDNKWSSCGGINKDKAYSMIRRYNSDIKVDNALQQLKSYWDDLLSGFYLESG
DDRLDRMVNTWNQYQCMVTFNLARSASYFESGISRGIGFRDSNQDLLGVVHMVPERARERLIDLARTQFEDGSTYHQYQP
LTKEGNNEIGSGFNDDPLWLILGTAAYIKETGDISILNEEVSFNNGKEATLFDHLLASFNHVVLNKGPHGLPLIGRADWN
DCLNLNCFSTDPGESFQTTTNKDDGQAESVLIAGMFVTIGPEFVKMCRFIGKDEIADRAQSEIEDMKKAVMEHGRDKNWF
LRAYDYYGNKVGSIDNNEGQIYIEPQGFCVMGGLGIESGFARKALDSVKERLDTEYGLVLLDPPYKQYYPELGEISSYPP
GYKENGGIFCHANPWIMIAETVLGRGNNAFEYYKKIAPAYLEEISDIHRMEPYVYAQMIAGKDAVNHGEAKNSWLTGTAA
WNYVAITHYILGIRPEYEGLKIDPCIPEEWSGFYVEKRFRGKVYKIHVNNPAKVSKGVKHIKVDGEIIEGNLIRIPLENQ
ARENVNDNTTQHIVEVIMG

Specific function: Involved in the production of beta-(1,2)-glucan. It is involved not only in invasion but also in bacteroid development [H]

COG id: COG3459

COG function: function code G; Cellobiose phosphorylase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.tumefaciens ChvB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR009342
- InterPro:   IPR019282
- InterPro:   IPR021478
- InterPro:   IPR011013
- InterPro:   IPR010383
- InterPro:   IPR010403 [H]

Pfam domain/function: PF06204 CBM_X; PF10091 DUF2329; PF11329 DUF3131; PF06165 Glyco_transf_36; PF06205 GT36_AF [H]

EC number: NA

Molecular weight: Translated: 93507; Mature: 93507

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00092 N6_MTASE ; PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYGYFDDRAREYVINNPETPYPWINYLGSKNYFCLLSNTAGGYSFYKDARLLRITRYRY
CCCCCCCCCCCCEEECCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHCCEEEEEEEEEC
NNVPIDAGGKYYYIYEDGEYWSPTWAPVKAKLDYYQCQHGLGYSVITGERKNISTEILYF
CCCCCCCCCEEEEEEECCCEECCCCCCCEEECHHHHHHCCCCEEEEECCCCCCCEEEEEE
VPVDDNCEIHRLKIKNNGSSVRKIKLFSFVEFCLWDAYDDMTNFQRNLSTGEVEVEGSTI
EECCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEE
FHKTEYRERRNHFSFFTVNSNISGFDTDRESFIGLYNGFHEPQVVVSGRPGNSIASGWSP
EEHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCH
IGSHCLEIVLQPGEEQSYIFILGFMENNPDNKWSSCGGINKDKAYSMIRRYNSDIKVDNA
HHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHH
LQQLKSYWDDLLSGFYLESGDDRLDRMVNTWNQYQCMVTFNLARSASYFESGISRGIGFR
HHHHHHHHHHHHHCCEECCCCHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCC
DSNQDLLGVVHMVPERARERLIDLARTQFEDGSTYHQYQPLTKEGNNEIGSGFNDDPLWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEE
ILGTAAYIKETGDISILNEEVSFNNGKEATLFDHLLASFNHVVLNKGPHGLPLIGRADWN
EEECHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCEEEECCCCC
DCLNLNCFSTDPGESFQTTTNKDDGQAESVLIAGMFVTIGPEFVKMCRFIGKDEIADRAQ
CCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEHECCCHHHHHHHHHHCCHHHHHHHH
SEIEDMKKAVMEHGRDKNWFLRAYDYYGNKVGSIDNNEGQIYIEPQGFCVMGGLGIESGF
HHHHHHHHHHHHCCCCCCEEEEEEECCCCEECCCCCCCCEEEECCCCEEEECCCCCCCCH
ARKALDSVKERLDTEYGLVLLDPPYKQYYPELGEISSYPPGYKENGGIFCHANPWIMIAE
HHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEE
TVLGRGNNAFEYYKKIAPAYLEEISDIHRMEPYVYAQMIAGKDAVNHGEAKNSWLTGTAA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEECCC
WNYVAITHYILGIRPEYEGLKIDPCIPEEWSGFYVEKRFRGKVYKIHVNNPAKVSKGVKH
CCCEEEEEHHEECCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHCCCEE
IKVDGEIIEGNLIRIPLENQARENVNDNTTQHIVEVIMG
EEECCEEEECCEEEEECCCCHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKYGYFDDRAREYVINNPETPYPWINYLGSKNYFCLLSNTAGGYSFYKDARLLRITRYRY
CCCCCCCCCCCCEEECCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHCCEEEEEEEEEC
NNVPIDAGGKYYYIYEDGEYWSPTWAPVKAKLDYYQCQHGLGYSVITGERKNISTEILYF
CCCCCCCCCEEEEEEECCCEECCCCCCCEEECHHHHHHCCCCEEEEECCCCCCCEEEEEE
VPVDDNCEIHRLKIKNNGSSVRKIKLFSFVEFCLWDAYDDMTNFQRNLSTGEVEVEGSTI
EECCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEE
FHKTEYRERRNHFSFFTVNSNISGFDTDRESFIGLYNGFHEPQVVVSGRPGNSIASGWSP
EEHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCH
IGSHCLEIVLQPGEEQSYIFILGFMENNPDNKWSSCGGINKDKAYSMIRRYNSDIKVDNA
HHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHH
LQQLKSYWDDLLSGFYLESGDDRLDRMVNTWNQYQCMVTFNLARSASYFESGISRGIGFR
HHHHHHHHHHHHHCCEECCCCHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCC
DSNQDLLGVVHMVPERARERLIDLARTQFEDGSTYHQYQPLTKEGNNEIGSGFNDDPLWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEE
ILGTAAYIKETGDISILNEEVSFNNGKEATLFDHLLASFNHVVLNKGPHGLPLIGRADWN
EEECHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCEEEECCCCC
DCLNLNCFSTDPGESFQTTTNKDDGQAESVLIAGMFVTIGPEFVKMCRFIGKDEIADRAQ
CCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEHECCCHHHHHHHHHHCCHHHHHHHH
SEIEDMKKAVMEHGRDKNWFLRAYDYYGNKVGSIDNNEGQIYIEPQGFCVMGGLGIESGF
HHHHHHHHHHHHCCCCCCEEEEEEECCCCEECCCCCCCCEEEECCCCEEEECCCCCCCCH
ARKALDSVKERLDTEYGLVLLDPPYKQYYPELGEISSYPPGYKENGGIFCHANPWIMIAE
HHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEE
TVLGRGNNAFEYYKKIAPAYLEEISDIHRMEPYVYAQMIAGKDAVNHGEAKNSWLTGTAA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEECCC
WNYVAITHYILGIRPEYEGLKIDPCIPEEWSGFYVEKRFRGKVYKIHVNNPAKVSKGVKH
CCCEEEEEHHEECCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHCCCEE
IKVDGEIIEGNLIRIPLENQARENVNDNTTQHIVEVIMG
EEECCEEEECCEEEEECCCCHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2154461; 11481430 [H]