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The map label for this gene is ndvB [H]

Identifier: 220932810

GI number: 220932810

Start: 2125774

End: 2128128

Strand: Reverse

Name: ndvB [H]

Synonym: Hore_19760

Alternate gene names: 220932810

Gene position: 2128128-2125774 (Counterclockwise)

Preceding gene: 220932811

Following gene: 220932809

Centisome position: 82.54

GC content: 39.66

Gene sequence:

>2355_bases
TTGTCATACGGATATTTTGACAGTGAAAACAAAGAATATGTTATAACCAACCCACGGACCCCTACACCATGGATTAACTA
TATTGGTGGTGGAAATTATGGTGGAATTGTTTCCCAGACAGGGGGAGGATATAGTTTTGATGGTGACCCCAGGTTCAAAA
GGGTTTTAAGATATAGATATAATAGTATTCCTGAAGACCAACCCGGAAGGTATATTTATCTAAGGGATATTGATAACAAT
AATTACTGGTCAGCTACCTGGCAGCCTGTTAAAGCTGATTTTGATGAGTATGTATGCCGGCATGGACTTGGTTATACAAC
AATTGAGCAAAAAAAGGATGACATAGTTACCAGTGTTACATATTTTGTTCCGGGTAATGAATCCCTGGAAATATGGCAGT
TAAATGTTAAAAATTTGGGTGAAGAAACCAGACATCTCTCCCTGTATACCTATGCGGAATTTTCCTTTTTTGATGCAGTA
AAGGATCAGCAGAATGTGGACTGGACACAACAGATACAACAGGGTGAGTTCGAGGATAATATCCTATTCTGGAATGCATT
TATGAAAAACTGGGAATACATTTTTATGACAAGCAGTATTCAGGTAACGTCTTATGAAACCAGCCGTGAAAGGTTTGTTG
GTTGTTATCGTGACCTGTCCAATCCAATTGCTGTAGAGGAGAGTAATTGCAGCAATTATCTTGCCCAGAGGGGAAATGGT
GTTGGTTGCTTAAATCATGAAATCAAACTTGAGCCTGGATGTGAAAAAGAAATTATTTATATCCTTGGTACTACTCCCTC
AAAGCAAACTGTTAAAGAAAAAATATCCAGTTTTCTCGACCCGGAACAGGTAGAGCAGGAAAAAGAAGGTTTAAAAAAAT
ACTGGGATAATTTTTTAAGCAGCTGTGAGGTTGATACACCTGACCCTGAAATGAATTTAATGTTAAATACCTGGAACCAG
TACCAGTGTAAAACAACATTTAACTGGTCAAGGTTTGTATCACTGTATCAGTTAGGAATAAACAGAGGAATGGGATTCAG
GGATAGTGCCCAGGATGTTCTGGGTGTTATGCATGCTATACCGGATGAGTGCAGGGAATTAATTATTAAACTCTTCAAGA
TACAGCATCAGGATGGCCATGCCTATCATTTATACTACCCACTGACTGGAGAGGGTACAACAGGTGAAGCAGGGGTGGAT
GGGAGTGTTGACTGGTATTCAGATGACCACCTGTGGATAATTATTTCTGTAGCTGCTTACCTAAAGGAGACTGGTGACTT
TGACTTTTTAACAGAGGTAGTCCCCTATGCAGATAATCAGGGAGAAGGTACCGTTCTTGAACATTTATGTAAGGCACTGG
AATTCACGGAAAACCATAAGGGTAAGCACAATATTCCCCTTGCTGGTTTTGCAGACTGGAATGACACCATTAACCTGGAT
AATGGTAATGGGGTTGCAGAATCTGTCTGGACTGGTATGCTTTATTGTTATGCATTGAAAGAGATGCTTGACCTGCTTGA
GTATTTAGGAGAAAACCAACTTGTTACCCGTTATCAAGAGTATTACCAGTCACAAAGGGAAGCTATCAATAAATATGCAT
GGGATGGGGACTGGTATTTAAGGGCCTATGATGATAACGGGGAGCCATTAGGTTCCCAACATTGTGAACATGGAAAAATA
TTCCTTAATCCCCAGTCATGGTCTATAATGGCTGGAATAGCAGACAATAAGCAACAACAAAGATTATTACAGAAAGTAGA
TGAGATGTTAAATACTGAATTTGGTGTTGTGCTGGTATATCCCGCCTATCATAAGTATGACCCGGAAAAAGGTGGAATAA
CAACTTACCCACCCGGGGCGAAAGAAAATGGAGGCATATTCCTGCATACTAATCCCTGGCTTATTATTGCAGAAACAATG
CTGGGAAATGGTAACAGGGCATACCAGTATTACCGGAAGTTGTTACCCCCATTAAAGAATGATATTGCAGATCGATATGA
GATCGAACCCTATGTATACTGTCAGAACATATTAGGAAAAGAACATCCCCAGTTTGGGCTTGGCAGAAACTCATGGTTAA
CCGGTACGGCAGCATGGATGTACAGGGCCGCAGTATATTATATTCTTGGTGTGAGACCCACTTATGACGGTTTAATTATT
GACCCGGTTGTCCCTTCTTCCTGGGAAAACTTTAGTATAAAAAGAAAATTCAGAGGTAAAGTAATTGAGATAAATTGTAT
CAAATCGGATCGGAATTATATCAGGATTAATGGTGTCGGGGAAAAATCGGGTAATAAAGTATCGCTGAGTGAGTTAACTG
AAGATATCAACAGACTTGAAGTATATTATACATAA

Upstream 100 bases:

>100_bases
TCATAATAATAAATGTATATTTTGGACTGATCTCTGTGTTATACCAATAATGATTGTGACCAGGTTGCAGTTGCATAAAT
TTTAGGAGGAGGTGTTTGTA

Downstream 100 bases:

>100_bases
CGTGTAACAGACATAATATCCGTGGCAATAACCTATTAAAACAACTATTAAAGCTGTTAAAAGGAGTGAACTAACATGAA
ATACGGGTATTTTGATGACC

Product: glycosyltransferase 36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 784; Mature: 783

Protein sequence:

>784_residues
MSYGYFDSENKEYVITNPRTPTPWINYIGGGNYGGIVSQTGGGYSFDGDPRFKRVLRYRYNSIPEDQPGRYIYLRDIDNN
NYWSATWQPVKADFDEYVCRHGLGYTTIEQKKDDIVTSVTYFVPGNESLEIWQLNVKNLGEETRHLSLYTYAEFSFFDAV
KDQQNVDWTQQIQQGEFEDNILFWNAFMKNWEYIFMTSSIQVTSYETSRERFVGCYRDLSNPIAVEESNCSNYLAQRGNG
VGCLNHEIKLEPGCEKEIIYILGTTPSKQTVKEKISSFLDPEQVEQEKEGLKKYWDNFLSSCEVDTPDPEMNLMLNTWNQ
YQCKTTFNWSRFVSLYQLGINRGMGFRDSAQDVLGVMHAIPDECRELIIKLFKIQHQDGHAYHLYYPLTGEGTTGEAGVD
GSVDWYSDDHLWIIISVAAYLKETGDFDFLTEVVPYADNQGEGTVLEHLCKALEFTENHKGKHNIPLAGFADWNDTINLD
NGNGVAESVWTGMLYCYALKEMLDLLEYLGENQLVTRYQEYYQSQREAINKYAWDGDWYLRAYDDNGEPLGSQHCEHGKI
FLNPQSWSIMAGIADNKQQQRLLQKVDEMLNTEFGVVLVYPAYHKYDPEKGGITTYPPGAKENGGIFLHTNPWLIIAETM
LGNGNRAYQYYRKLLPPLKNDIADRYEIEPYVYCQNILGKEHPQFGLGRNSWLTGTAAWMYRAAVYYILGVRPTYDGLII
DPVVPSSWENFSIKRKFRGKVIEINCIKSDRNYIRINGVGEKSGNKVSLSELTEDINRLEVYYT

Sequences:

>Translated_784_residues
MSYGYFDSENKEYVITNPRTPTPWINYIGGGNYGGIVSQTGGGYSFDGDPRFKRVLRYRYNSIPEDQPGRYIYLRDIDNN
NYWSATWQPVKADFDEYVCRHGLGYTTIEQKKDDIVTSVTYFVPGNESLEIWQLNVKNLGEETRHLSLYTYAEFSFFDAV
KDQQNVDWTQQIQQGEFEDNILFWNAFMKNWEYIFMTSSIQVTSYETSRERFVGCYRDLSNPIAVEESNCSNYLAQRGNG
VGCLNHEIKLEPGCEKEIIYILGTTPSKQTVKEKISSFLDPEQVEQEKEGLKKYWDNFLSSCEVDTPDPEMNLMLNTWNQ
YQCKTTFNWSRFVSLYQLGINRGMGFRDSAQDVLGVMHAIPDECRELIIKLFKIQHQDGHAYHLYYPLTGEGTTGEAGVD
GSVDWYSDDHLWIIISVAAYLKETGDFDFLTEVVPYADNQGEGTVLEHLCKALEFTENHKGKHNIPLAGFADWNDTINLD
NGNGVAESVWTGMLYCYALKEMLDLLEYLGENQLVTRYQEYYQSQREAINKYAWDGDWYLRAYDDNGEPLGSQHCEHGKI
FLNPQSWSIMAGIADNKQQQRLLQKVDEMLNTEFGVVLVYPAYHKYDPEKGGITTYPPGAKENGGIFLHTNPWLIIAETM
LGNGNRAYQYYRKLLPPLKNDIADRYEIEPYVYCQNILGKEHPQFGLGRNSWLTGTAAWMYRAAVYYILGVRPTYDGLII
DPVVPSSWENFSIKRKFRGKVIEINCIKSDRNYIRINGVGEKSGNKVSLSELTEDINRLEVYYT
>Mature_783_residues
SYGYFDSENKEYVITNPRTPTPWINYIGGGNYGGIVSQTGGGYSFDGDPRFKRVLRYRYNSIPEDQPGRYIYLRDIDNNN
YWSATWQPVKADFDEYVCRHGLGYTTIEQKKDDIVTSVTYFVPGNESLEIWQLNVKNLGEETRHLSLYTYAEFSFFDAVK
DQQNVDWTQQIQQGEFEDNILFWNAFMKNWEYIFMTSSIQVTSYETSRERFVGCYRDLSNPIAVEESNCSNYLAQRGNGV
GCLNHEIKLEPGCEKEIIYILGTTPSKQTVKEKISSFLDPEQVEQEKEGLKKYWDNFLSSCEVDTPDPEMNLMLNTWNQY
QCKTTFNWSRFVSLYQLGINRGMGFRDSAQDVLGVMHAIPDECRELIIKLFKIQHQDGHAYHLYYPLTGEGTTGEAGVDG
SVDWYSDDHLWIIISVAAYLKETGDFDFLTEVVPYADNQGEGTVLEHLCKALEFTENHKGKHNIPLAGFADWNDTINLDN
GNGVAESVWTGMLYCYALKEMLDLLEYLGENQLVTRYQEYYQSQREAINKYAWDGDWYLRAYDDNGEPLGSQHCEHGKIF
LNPQSWSIMAGIADNKQQQRLLQKVDEMLNTEFGVVLVYPAYHKYDPEKGGITTYPPGAKENGGIFLHTNPWLIIAETML
GNGNRAYQYYRKLLPPLKNDIADRYEIEPYVYCQNILGKEHPQFGLGRNSWLTGTAAWMYRAAVYYILGVRPTYDGLIID
PVVPSSWENFSIKRKFRGKVIEINCIKSDRNYIRINGVGEKSGNKVSLSELTEDINRLEVYYT

Specific function: Involved in the production of beta-(1,2)-glucan. It is involved not only in invasion but also in bacteroid development [H]

COG id: COG3459

COG function: function code G; Cellobiose phosphorylase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.tumefaciens ChvB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR009342
- InterPro:   IPR019282
- InterPro:   IPR021478
- InterPro:   IPR011013
- InterPro:   IPR010383
- InterPro:   IPR010403 [H]

Pfam domain/function: PF06204 CBM_X; PF10091 DUF2329; PF11329 DUF3131; PF06165 Glyco_transf_36; PF06205 GT36_AF [H]

EC number: NA

Molecular weight: Translated: 90431; Mature: 90300

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYGYFDSENKEYVITNPRTPTPWINYIGGGNYGGIVSQTGGGYSFDGDPRFKRVLRYRY
CCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH
NSIPEDQPGRYIYLRDIDNNNYWSATWQPVKADFDEYVCRHGLGYTTIEQKKDDIVTSVT
HCCCCCCCCCEEEEEECCCCCEEEEECCCHHCCHHHHHHHCCCCCCCHHCCCCCEEEEEE
YFVPGNESLEIWQLNVKNLGEETRHLSLYTYAEFSFFDAVKDQQNVDWTQQIQQGEFEDN
EEECCCCCEEEEEEEHHHCCCHHHEEEEEEEECHHHHHHHCCCCCCCHHHHHHCCCCCCC
ILFWNAFMKNWEYIFMTSSIQVTSYETSRERFVGCYRDLSNPIAVEESNCSNYLAQRGNG
EEEEEEHHCCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCC
VGCLNHEIKLEPGCEKEIIYILGTTPSKQTVKEKISSFLDPEQVEQEKEGLKKYWDNFLS
EEEECCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SCEVDTPDPEMNLMLNTWNQYQCKTTFNWSRFVSLYQLGINRGMGFRDSAQDVLGVMHAI
CCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
PDECRELIIKLFKIQHQDGHAYHLYYPLTGEGTTGEAGVDGSVDWYSDDHLWIIISVAAY
CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEHHHH
LKETGDFDFLTEVVPYADNQGEGTVLEHLCKALEFTENHKGKHNIPLAGFADWNDTINLD
HHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEC
NGNGVAESVWTGMLYCYALKEMLDLLEYLGENQLVTRYQEYYQSQREAINKYAWDGDWYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
RAYDDNGEPLGSQHCEHGKIFLNPQSWSIMAGIADNKQQQRLLQKVDEMLNTEFGVVLVY
EEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEE
PAYHKYDPEKGGITTYPPGAKENGGIFLHTNPWLIIAETMLGNGNRAYQYYRKLLPPLKN
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEHHCCCCHHHHHHHHHCCHHHH
DIADRYEIEPYVYCQNILGKEHPQFGLGRNSWLTGTAAWMYRAAVYYILGVRPTYDGLII
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEE
DPVVPSSWENFSIKRKFRGKVIEINCIKSDRNYIRINGVGEKSGNKVSLSELTEDINRLE
CCCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEEECCCCCCCEEEHHHHHHHHHHEE
VYYT
EEEC
>Mature Secondary Structure 
SYGYFDSENKEYVITNPRTPTPWINYIGGGNYGGIVSQTGGGYSFDGDPRFKRVLRYRY
CCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH
NSIPEDQPGRYIYLRDIDNNNYWSATWQPVKADFDEYVCRHGLGYTTIEQKKDDIVTSVT
HCCCCCCCCCEEEEEECCCCCEEEEECCCHHCCHHHHHHHCCCCCCCHHCCCCCEEEEEE
YFVPGNESLEIWQLNVKNLGEETRHLSLYTYAEFSFFDAVKDQQNVDWTQQIQQGEFEDN
EEECCCCCEEEEEEEHHHCCCHHHEEEEEEEECHHHHHHHCCCCCCCHHHHHHCCCCCCC
ILFWNAFMKNWEYIFMTSSIQVTSYETSRERFVGCYRDLSNPIAVEESNCSNYLAQRGNG
EEEEEEHHCCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCC
VGCLNHEIKLEPGCEKEIIYILGTTPSKQTVKEKISSFLDPEQVEQEKEGLKKYWDNFLS
EEEECCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SCEVDTPDPEMNLMLNTWNQYQCKTTFNWSRFVSLYQLGINRGMGFRDSAQDVLGVMHAI
CCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
PDECRELIIKLFKIQHQDGHAYHLYYPLTGEGTTGEAGVDGSVDWYSDDHLWIIISVAAY
CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEHHHH
LKETGDFDFLTEVVPYADNQGEGTVLEHLCKALEFTENHKGKHNIPLAGFADWNDTINLD
HHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEC
NGNGVAESVWTGMLYCYALKEMLDLLEYLGENQLVTRYQEYYQSQREAINKYAWDGDWYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
RAYDDNGEPLGSQHCEHGKIFLNPQSWSIMAGIADNKQQQRLLQKVDEMLNTEFGVVLVY
EEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEE
PAYHKYDPEKGGITTYPPGAKENGGIFLHTNPWLIIAETMLGNGNRAYQYYRKLLPPLKN
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEHHCCCCHHHHHHHHHCCHHHH
DIADRYEIEPYVYCQNILGKEHPQFGLGRNSWLTGTAAWMYRAAVYYILGVRPTYDGLII
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEE
DPVVPSSWENFSIKRKFRGKVIEINCIKSDRNYIRINGVGEKSGNKVSLSELTEDINRLE
CCCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEEECCCCCCCEEEHHHHHHHHHHEE
VYYT
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2154461; 11481430 [H]