The gene/protein map for NC_005966 is currently unavailable.
Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932796

Identifier: 220932796

GI number: 220932796

Start: 2108233

End: 2110947

Strand: Reverse

Name: 220932796

Synonym: Hore_19620

Alternate gene names: NA

Gene position: 2110947-2108233 (Counterclockwise)

Preceding gene: 220932797

Following gene: 220932795

Centisome position: 81.88

GC content: 40.22

Gene sequence:

>2715_bases
ATGAGAAAAACTAACCTGGCCAGGGGTTTAATATTCTTTTTTTTGACCATAATTTTACTTTCAGGTTTTTTAAGTGACCG
CTGTGAGGCAGGTATATTTGAGAGTATTATTAATGATTACTTTAATAAGACACCAGCAGATTATACAGTTAGGGATATTC
CTGAAAGGGGCTGGGGTGAGGTTACCTTTCCGGACTACGGGGGAGAAAAAAGGGTCAGTGCATTTTTAAGGACTGTAGAT
TCTCCCCATTTTAATGTTATTTTTGTCCATGGATACGGCCGCTCGGGAAAGTCTTATTATTTTCATGGTGTTTTTCTTAA
ACATTATATTGAAAATAGTTCCCGTTATAAGTTTAATGAAATGACTATAGACCTGGCTGGATGGGGAGGTTTGGATCACA
GGTTTAACGGTTTTAACGACTATTCAAATGATATCCTGGGTGCAGTAAAATATCTGGAGAGACTCTCTCCAGATATTCCC
ACTATAGTGGTCGGTCACAGTCTGGGGGGATATAGTGTTTTACTGGCTGCTGCCCGGGATCAGGAAGGGTTAATTGATGG
TATTATTTCTGCCTCCCCTTTTTCAGACTATATGAGGCTGGTGAGGGAGTATAGATTTGGTGATAATTATGCCTTCCCCT
GGATTTTCCGGAACTTTATCGGGGTGGCTGATAAAAGACTGGACGGCTTTTTTTCTGACTATAACCTGGAAAAGCTTGTA
TCTGATATCAGGGTTCCTGTTTTAATAATGTCAGGTAAGCTAGACCATCCGCCTTTTAAGTTAATGGCCTTCGATATATA
TAATAAAATTCCAGGTCATAATAAACAATTATATTATTTCGATGCAAACCATTTTGGTTATTATTATTTTCAAAGCAGGC
AGGTAAGGGCTGTTTTAAATAATTATTTTGATTCCATCTACCAGGGCAAAAGGCTTAATATGTTTGAAGTCCCTGTCTCG
GCAAAAGTTCTGAAAAAGGCAAAAGGATATCAGGTCATGATAACTCTGGATAAAAGGATTAATAAACCCTCACCGGTCCA
GGTTTGTCTGGAAAAAGATGGTGAACTTACATATAAAAAATATGTCTTTTCCCCTGACCAGAAAAGGGCTGTCTTTAATC
TATCTTTTAAACCGGAAAGTTATTATGTCTTCAGGCCAGTTATAGCTGTCGTTGAGGGGAAAACATGGCACTATAGATTA
AGTGATGAAGAAAAAGCCTTTGCTCGCCTCTATATATTTGAAAACAGTTCCCGGGGAGGACTTTCTGACCCCGGACCAGA
AGAACAGGAAGCATTACAGGTACTAAAAAAATCTAATAAAGTCTATTACCTGGAATGGCTGGCTGAATCCCTGGCCCGAC
CGCGGACCGCCCGTTATAGAGAAGCTATAGATCTTTATGAGAAAATGCTCACCATGGATGTTCATGAAAACATCAGGGTC
AAATCTCTTTATAAAATATATGTAATATACCGGGATGGTTTAAAGGATAAAGGGAGGGCTGAGTTTTATTATAACAAACT
CAGGGAATATGACCACCGGAAAACGCTGGTGGCAAGGGCCATTGATTATGAGAGGAATAATCTCGATTATGGAGAGAAGT
CATATGTCGTTGGTGATATTAAAATAATTGGTTTGACCAGAAGCAATCAGGGGCTTATAACCAGTCAATTACCTTTCAGG
ATTGGGGCTCCCTGGACCAGGGAGATTAAGGATCTAACTGAACAGCGGTTATATCATATGAACATCTTTAATCCCCTTAA
CCTCAAAGTTGAAGATAAGGTTATAGAGGGGAACAAAGTTAGTGTTGTGATCAGGGTCCATGATTCTAATCCCTTTATGA
TCCATCCGGGAGAGTTTGTTATCTTTAAGACAATCAATCTGGCTTCCAGTCAGTTTACCCAGAGGTTGAGAAATCCATTA
GGCAATGGATTGAGTCCCTTTGTAGGGGTTAACTGGTCGGCTGAACCCTGGTGGCTTGTCGGTTTTGATTATACGGCACG
ACAGGGCTGGGTAACATCCTGTGAATATATAAATTACACCAGGCGGGAGGAATTTAATAATATTAGTTTTTCGGAAAAAG
GTTTTAAAACCAGTTTGAATTTTAGCAATACTCCCGCCCCTTACCGGAAGGTGGAATATTCATTAGGTTATCAGGAACAA
AATTATAAAAAAGAAGATGCCTCTCCTATAGAACAGAAGTATTTAATCCCGGGGATTACACTATCTCTGGAAGAGGTGGG
AAATTTAATAGTCCATCTTGATTATGCTTATTCCCCCGGGGAAGGATTTCCTGATTTCGTTCGTTCAAAATTTAAATGGC
ACATTGAAAAAAAGGCCGGTCAGGGAAGACTTATATTTTCTTTTAACGGAGGGCTTTCCAGCAGCAACACCCCCTTAAAC
TACCAGTTTAAAGGAGGAGGTTTTAGCAGTATTCCCCTGAGGGGACAAAGTTATGACAGGGCTGGAACCCGTTATCTATC
AACCAGTGTTGAATACCATCATCCTCTTTTAAATGAGCTGGTATCGGCAATTATCTTTGTAGATGGCGGAAAGATAATTC
CGGTCAGCGAAGATTTTTCCACGATAAACTGGGAGGTTGATGGTGGCCTTGGTGTTGCTATTTACACTCCTCTGGGACCT
GTTAGGGCGGACCTTGGTTTTGACAGGATAGACCGCCAGACTACTTTTAATATGGGATTTGGTCATTCGTTTTAA

Upstream 100 bases:

>100_bases
TAAACCGGGCTCACAAATTTAGTATAAAAATCACTTAATTGATTAAATCCCTGATTTATGGTAATATATTGGAAAATGGT
TACAGAAGGTAGGGATTATT

Downstream 100 bases:

>100_bases
AATAGAAATAATGTGATTGTTCCGGCCAAAGAAAGTCACCAGAGTAAAGATAACCATTCTAAAGGTGTACAGGGAGAGCA
AATATGATGACACCTGTATC

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 904; Mature: 904

Protein sequence:

>904_residues
MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGEVTFPDYGGEKRVSAFLRTVD
SPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNEMTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIP
TIVVGHSLGGYSVLLAAARDQEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV
SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLNNYFDSIYQGKRLNMFEVPVS
AKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKKYVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRL
SDEEKAFARLYIFENSSRGGLSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV
KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDIKIIGLTRSNQGLITSQLPFR
IGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKVSVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPL
GNGLSPFVGVNWSAEPWWLVGFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ
NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAGQGRLIFSFNGGLSSSNTPLN
YQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNELVSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGP
VRADLGFDRIDRQTTFNMGFGHSF

Sequences:

>Translated_904_residues
MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGEVTFPDYGGEKRVSAFLRTVD
SPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNEMTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIP
TIVVGHSLGGYSVLLAAARDQEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV
SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLNNYFDSIYQGKRLNMFEVPVS
AKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKKYVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRL
SDEEKAFARLYIFENSSRGGLSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV
KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDIKIIGLTRSNQGLITSQLPFR
IGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKVSVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPL
GNGLSPFVGVNWSAEPWWLVGFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ
NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAGQGRLIFSFNGGLSSSNTPLN
YQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNELVSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGP
VRADLGFDRIDRQTTFNMGFGHSF
>Mature_904_residues
MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGEVTFPDYGGEKRVSAFLRTVD
SPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNEMTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIP
TIVVGHSLGGYSVLLAAARDQEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV
SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLNNYFDSIYQGKRLNMFEVPVS
AKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKKYVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRL
SDEEKAFARLYIFENSSRGGLSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV
KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDIKIIGLTRSNQGLITSQLPFR
IGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKVSVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPL
GNGLSPFVGVNWSAEPWWLVGFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ
NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAGQGRLIFSFNGGLSSSNTPLN
YQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNELVSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGP
VRADLGFDRIDRQTTFNMGFGHSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104153; Mature: 104153

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
VTFPDYGGEKRVSAFLRTVDSPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNE
EECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHCCCCCEEEEE
MTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIPTIVVGHSLGGYSVLLAAARD
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCC
QEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV
CCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLN
HHCCCEEEEEECCCCCCCCEEEEEEHHHCCCCCCCEEEEEECCCEEEEEEECCHHHHHHH
NYFDSIYQGKRLNMFEVPVSAKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKK
HHHHHHHCCCCCCEEECCCHHHHHHHCCCCEEEEEEHHHCCCCCCEEEEECCCCCEEEEE
YVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRLSDEEKAFARLYIFENSSRGG
EEECCCCCCEEEEEEECCCCEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEEECCCCCC
LSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV
CCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDI
EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
KIIGLTRSNQGLITSQLPFRIGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKV
EEEEEEECCCCEEEECCCEEECCCHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCCEE
SVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPLGNGLSPFVGVNWSAEPWWLV
EEEEEEECCCCEEECCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEE
GFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ
EECCCCCCCCCEEHHHCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCC
NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAG
CCCCCCCCCCHHHEECCCCEEEHHHHCCEEEEEEECCCCCCCCHHHHHHHHEEEEEECCC
QGRLIFSFNGGLSSSNTPLNYQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNEL
CCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH
VSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGPVRADLGFDRIDRQTTFNMGF
HHEEEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHCCCHHHCCCCEEEECCC
GHSF
CCCC
>Mature Secondary Structure
MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
VTFPDYGGEKRVSAFLRTVDSPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNE
EECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHCCCCCEEEEE
MTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIPTIVVGHSLGGYSVLLAAARD
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCC
QEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV
CCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLN
HHCCCEEEEEECCCCCCCCEEEEEEHHHCCCCCCCEEEEEECCCEEEEEEECCHHHHHHH
NYFDSIYQGKRLNMFEVPVSAKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKK
HHHHHHHCCCCCCEEECCCHHHHHHHCCCCEEEEEEHHHCCCCCCEEEEECCCCCEEEEE
YVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRLSDEEKAFARLYIFENSSRGG
EEECCCCCCEEEEEEECCCCEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEEECCCCCC
LSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV
CCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDI
EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
KIIGLTRSNQGLITSQLPFRIGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKV
EEEEEEECCCCEEEECCCEEECCCHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCCEE
SVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPLGNGLSPFVGVNWSAEPWWLV
EEEEEEECCCCEEECCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEE
GFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ
EECCCCCCCCCEEHHHCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCC
NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAG
CCCCCCCCCCHHHEECCCCEEEHHHHCCEEEEEEECCCCCCCCHHHHHHHHEEEEEECCC
QGRLIFSFNGGLSSSNTPLNYQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNEL
CCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH
VSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGPVRADLGFDRIDRQTTFNMGF
HHEEEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHCCCHHHCCCCEEEECCC
GHSF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA