| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932797
Identifier: 220932797
GI number: 220932797
Start: 2111087
End: 2112040
Strand: Reverse
Name: 220932797
Synonym: Hore_19630
Alternate gene names: NA
Gene position: 2112040-2111087 (Counterclockwise)
Preceding gene: 220932798
Following gene: 220932796
Centisome position: 81.92
GC content: 41.19
Gene sequence:
>954_bases ATGAAAAGGTTTCTTAAAATATTATTGATATTAACTGTGGTAACAGTAATAACAGCAGGGGTTGGCCCTTTTCGTTATCA GGTAAAGGCTAAATTCAAGCCGATTCTTCCCTTTGAAGGGAGTATTGTTGGTCTGGAATATAGCCATCATCTTCAGGGAT TGGAAGAAAAAATTTCTGACCAGTATCCTTACCTTGGGGCTGCTTATGATTATAGTAATAATGAGGTATATTACAGGGTA GGTAACCGGACGGAATGGGAGGGACTTTATTTTGACCTGAATTACCATTACTGGTTAAATAATAACCTTCCTGGTTATAT ATACCAGAAGGGGGTAAAGGCAGCGGTATCTTATCCCATCGAACCGGAACACGGCCTGGCCTTTTTGCTGTTTCAGGGAC AAATCGGTTCCAGTTTTAATGAAGAAATAAAGACCCGTTTTGCCTACCTTAGCTATTATAAAGACCTTCACTATGATGTC CTTAATGAAATAAAGTTTTATTTCAATGTAACTTCAGGTCAGGATATAACAGAGGGTGATAGTTACTATATATCAAACCT GACCCTGCCGGTTAAACTAGGGGAGTACAGGATAGTACCCAGATTTGGTTATATTAACTCCTCATCCCGGATAGAACCCT GTTATAATCTGTCCTCTTATGTCACTGGGTATGAAAATGAAAAGGGAAACAGGCTGGTCAGCCTCTTTCTGGAAAGGCAG TTTCAAATCTATCCTTACAGTGATAACCCCTTTCTGGCCCTGATGAATGGTTCGGTCTTTGTCCGGACCGGTGATGTGAT TTCTGCGGATGAATCGGTGAAGGATTTTAAATTACATACCAGTGGGGGCCTGGGTCTGGTCTGGGCCATGGGGCAGGTAG AATATCGTCTTGAGGAGTTTGTAACCGATAAAGGGGAGTGGCAGACCATGTTTTTTGTCAGTTTTAGTTATTAA
Upstream 100 bases:
>100_bases CTTAAGTCTATAATTGAATAATTAAGACAGGGACAGGTAAGAATGCACCAACCTATATTTAGTCTAAACTTAAGTCTATC ATTGAAAGTGAGGGATATGT
Downstream 100 bases:
>100_bases CATAATAATAAATTCTTTTATAATTGATTCTTCTGGTCGTAAACCGGGCTCACAAATTTAGTATAAAAATCACTTAATTG ATTAAATCCCTGATTTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKRFLKILLILTVVTVITAGVGPFRYQVKAKFKPILPFEGSIVGLEYSHHLQGLEEKISDQYPYLGAAYDYSNNEVYYRV GNRTEWEGLYFDLNYHYWLNNNLPGYIYQKGVKAAVSYPIEPEHGLAFLLFQGQIGSSFNEEIKTRFAYLSYYKDLHYDV LNEIKFYFNVTSGQDITEGDSYYISNLTLPVKLGEYRIVPRFGYINSSSRIEPCYNLSSYVTGYENEKGNRLVSLFLERQ FQIYPYSDNPFLALMNGSVFVRTGDVISADESVKDFKLHTSGGLGLVWAMGQVEYRLEEFVTDKGEWQTMFFVSFSY
Sequences:
>Translated_317_residues MKRFLKILLILTVVTVITAGVGPFRYQVKAKFKPILPFEGSIVGLEYSHHLQGLEEKISDQYPYLGAAYDYSNNEVYYRV GNRTEWEGLYFDLNYHYWLNNNLPGYIYQKGVKAAVSYPIEPEHGLAFLLFQGQIGSSFNEEIKTRFAYLSYYKDLHYDV LNEIKFYFNVTSGQDITEGDSYYISNLTLPVKLGEYRIVPRFGYINSSSRIEPCYNLSSYVTGYENEKGNRLVSLFLERQ FQIYPYSDNPFLALMNGSVFVRTGDVISADESVKDFKLHTSGGLGLVWAMGQVEYRLEEFVTDKGEWQTMFFVSFSY >Mature_317_residues MKRFLKILLILTVVTVITAGVGPFRYQVKAKFKPILPFEGSIVGLEYSHHLQGLEEKISDQYPYLGAAYDYSNNEVYYRV GNRTEWEGLYFDLNYHYWLNNNLPGYIYQKGVKAAVSYPIEPEHGLAFLLFQGQIGSSFNEEIKTRFAYLSYYKDLHYDV LNEIKFYFNVTSGQDITEGDSYYISNLTLPVKLGEYRIVPRFGYINSSSRIEPCYNLSSYVTGYENEKGNRLVSLFLERQ FQIYPYSDNPFLALMNGSVFVRTGDVISADESVKDFKLHTSGGLGLVWAMGQVEYRLEEFVTDKGEWQTMFFVSFSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36697; Mature: 36697
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFLKILLILTVVTVITAGVGPFRYQVKAKFKPILPFEGSIVGLEYSHHLQGLEEKISD CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCC QYPYLGAAYDYSNNEVYYRVGNRTEWEGLYFDLNYHYWLNNNLPGYIYQKGVKAAVSYPI CCCCEEEEEECCCCEEEEEECCCCEECEEEEEEEEEEEECCCCCCCEECCCCCEEEECCC EPEHGLAFLLFQGQIGSSFNEEIKTRFAYLSYYKDLHYDVLNEIKFYFNVTSGQDITEGD CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCC SYYISNLTLPVKLGEYRIVPRFGYINSSSRIEPCYNLSSYVTGYENEKGNRLVSLFLERQ CEEEEEEEEEEEECCEEEEEEECEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCC FQIYPYSDNPFLALMNGSVFVRTGDVISADESVKDFKLHTSGGLGLVWAMGQVEYRLEEF EEEEEECCCCEEEEECCEEEEEECCEEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHH VTDKGEWQTMFFVSFSY HCCCCCEEEEEEEEECC >Mature Secondary Structure MKRFLKILLILTVVTVITAGVGPFRYQVKAKFKPILPFEGSIVGLEYSHHLQGLEEKISD CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCC QYPYLGAAYDYSNNEVYYRVGNRTEWEGLYFDLNYHYWLNNNLPGYIYQKGVKAAVSYPI CCCCEEEEEECCCCEEEEEECCCCEECEEEEEEEEEEEECCCCCCCEECCCCCEEEECCC EPEHGLAFLLFQGQIGSSFNEEIKTRFAYLSYYKDLHYDVLNEIKFYFNVTSGQDITEGD CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCC SYYISNLTLPVKLGEYRIVPRFGYINSSSRIEPCYNLSSYVTGYENEKGNRLVSLFLERQ CEEEEEEEEEEEECCEEEEEEECEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCC FQIYPYSDNPFLALMNGSVFVRTGDVISADESVKDFKLHTSGGLGLVWAMGQVEYRLEEF EEEEEECCCCEEEEECCEEEEEECCEEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHH VTDKGEWQTMFFVSFSY HCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA