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The map label for this gene is atpC [H]

Identifier: 220932779

GI number: 220932779

Start: 2083488

End: 2084540

Strand: Reverse

Name: atpC [H]

Synonym: Hore_19450

Alternate gene names: 220932779

Gene position: 2084540-2083488 (Counterclockwise)

Preceding gene: 220932780

Following gene: 220932778

Centisome position: 80.85

GC content: 35.14

Gene sequence:

>1053_bases
ATGGGTATGATTTCTTATGCAGGGGTTAATGCCAAAGTAAAGGCCCTATTTGGAAAGATGCTGAGTGAAGAGGACTATAA
TAATTTAATTAACCAGAAGTCTGTTCAGGATATCTTTGATTACCTTTATCAAAATACTCATTACCGGGAATATCTTGAAG
AACTGGCCGGAGTAGAAATCCATCGACGCCAGCTGGAACGTACCCTTAAGAAGAACTTTATCAGGGACTTTAAGGCTATC
CTCAGGTATTTGACAGGTCCTATCAGGGACTTTTTTAAATTCTTTCTTATCAAGTTTGAAATAGAAGATTTAAAGATGTT
ATTGAGAACAAGTTTAATTGAACATGATGAGGAATACCTTAAAAATACCCTTGTTTATATGGGTATTTACGAAGATATAT
CCCTTGATAGATTGACTTCCATAAATAATTACCATGATTTACTGGAGGTATTTAAGGGAACTCAATATTATGATACCCTG
GAGAGGTTTGAGGAACGTTATATGAAAGATAAAAACCTGTTTCCCATAGAAATGACCCTTGATTTTAACTATTTTATTAA
ACTGGCCCAACTGGTCAGGAGATTGAGGGGTGAGGATTACCGGATTATCCGGGATTTGCTCGGGACCCAGGTGGATCTCT
TAAATATTCAGTGGATTTACCGCACAAAAAGGTATTATAACCTCAATACTGAAGAGATTTTAAATTATACTATTCCTATT
CACTACCGCCTTTCAGCTAAAGACCTTAAAAATCTGTCTCAGTCAAGTCAAGAAGAAGAAATATTTAACTACCTCTCTAA
AACAGATTATGATGAGCTTTTTTCTCCGGTGGCCCATGACAAAAGTATTCTCTTTGAAAAGTACTTTCTTTCCTATCTCC
TCAAAAAGGCTTACCATACCAAAATTAGTGGCACTTCTAATGTTGGTGTTATAATTTCCTATACTTTTATCAAGGAGTAT
GAAATAAGAGATATTATTACTGTTGTCGAGGGTGTCAGGTATTCTCTGAGAAGTGAAGATATTAAAAATTACCTAATAAG
GGATTTAAAGTAG

Upstream 100 bases:

>100_bases
CCAAAGAGCTTAAAGAGATGGAGGCCAGATTTAACAGGATTAAAAGTGATGTGGTTAACAAGTACTTTAAGCAGATTACA
GGGTTTGAAGGTGAGTAATT

Downstream 100 bases:

>100_bases
GGTGATAATATGGCTGTTGTAACCATGAAAAAATTTCAAATTGTTGGTCATAAAAAAGAGCTTGACCCTATCTCGTACCG
GGTCATTAACAGTGATTTTA

Product: H(+)-transporting two-sector ATPase

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit C [H]

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MGMISYAGVNAKVKALFGKMLSEEDYNNLINQKSVQDIFDYLYQNTHYREYLEELAGVEIHRRQLERTLKKNFIRDFKAI
LRYLTGPIRDFFKFFLIKFEIEDLKMLLRTSLIEHDEEYLKNTLVYMGIYEDISLDRLTSINNYHDLLEVFKGTQYYDTL
ERFEERYMKDKNLFPIEMTLDFNYFIKLAQLVRRLRGEDYRIIRDLLGTQVDLLNIQWIYRTKRYYNLNTEEILNYTIPI
HYRLSAKDLKNLSQSSQEEEIFNYLSKTDYDELFSPVAHDKSILFEKYFLSYLLKKAYHTKISGTSNVGVIISYTFIKEY
EIRDIITVVEGVRYSLRSEDIKNYLIRDLK

Sequences:

>Translated_350_residues
MGMISYAGVNAKVKALFGKMLSEEDYNNLINQKSVQDIFDYLYQNTHYREYLEELAGVEIHRRQLERTLKKNFIRDFKAI
LRYLTGPIRDFFKFFLIKFEIEDLKMLLRTSLIEHDEEYLKNTLVYMGIYEDISLDRLTSINNYHDLLEVFKGTQYYDTL
ERFEERYMKDKNLFPIEMTLDFNYFIKLAQLVRRLRGEDYRIIRDLLGTQVDLLNIQWIYRTKRYYNLNTEEILNYTIPI
HYRLSAKDLKNLSQSSQEEEIFNYLSKTDYDELFSPVAHDKSILFEKYFLSYLLKKAYHTKISGTSNVGVIISYTFIKEY
EIRDIITVVEGVRYSLRSEDIKNYLIRDLK
>Mature_349_residues
GMISYAGVNAKVKALFGKMLSEEDYNNLINQKSVQDIFDYLYQNTHYREYLEELAGVEIHRRQLERTLKKNFIRDFKAIL
RYLTGPIRDFFKFFLIKFEIEDLKMLLRTSLIEHDEEYLKNTLVYMGIYEDISLDRLTSINNYHDLLEVFKGTQYYDTLE
RFEERYMKDKNLFPIEMTLDFNYFIKLAQLVRRLRGEDYRIIRDLLGTQVDLLNIQWIYRTKRYYNLNTEEILNYTIPIH
YRLSAKDLKNLSQSSQEEEIFNYLSKTDYDELFSPVAHDKSILFEKYFLSYLLKKAYHTKISGTSNVGVIISYTFIKEYE
IRDIITVVEGVRYSLRSEDIKNYLIRDLK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1527

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase V0D/AC39 subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014272
- InterPro:   IPR002843 [H]

Pfam domain/function: PF01992 vATP-synt_AC39 [H]

EC number: 3.6.3.14

Molecular weight: Translated: 42199; Mature: 42068

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMISYAGVNAKVKALFGKMLSEEDYNNLINQKSVQDIFDYLYQNTHYREYLEELAGVEI
CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHH
HRRQLERTLKKNFIRDFKAILRYLTGPIRDFFKFFLIKFEIEDLKMLLRTSLIEHDEEYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNTLVYMGIYEDISLDRLTSINNYHDLLEVFKGTQYYDTLERFEERYMKDKNLFPIEMTL
HHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
DFNYFIKLAQLVRRLRGEDYRIIRDLLGTQVDLLNIQWIYRTKRYYNLNTEEILNYTIPI
CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHEEEHEEEEHHHHCCCCHHHHHHEEEEE
HYRLSAKDLKNLSQSSQEEEIFNYLSKTDYDELFSPVAHDKSILFEKYFLSYLLKKAYHT
EEEECHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISGTSNVGVIISYTFIKEYEIRDIITVVEGVRYSLRSEDIKNYLIRDLK
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GMISYAGVNAKVKALFGKMLSEEDYNNLINQKSVQDIFDYLYQNTHYREYLEELAGVEI
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHH
HRRQLERTLKKNFIRDFKAILRYLTGPIRDFFKFFLIKFEIEDLKMLLRTSLIEHDEEYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNTLVYMGIYEDISLDRLTSINNYHDLLEVFKGTQYYDTLERFEERYMKDKNLFPIEMTL
HHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
DFNYFIKLAQLVRRLRGEDYRIIRDLLGTQVDLLNIQWIYRTKRYYNLNTEEILNYTIPI
CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHEEEHEEEEHHHHCCCCHHHHHHEEEEE
HYRLSAKDLKNLSQSSQEEEIFNYLSKTDYDELFSPVAHDKSILFEKYFLSYLLKKAYHT
EEEECHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISGTSNVGVIISYTFIKEYEIRDIITVVEGVRYSLRSEDIKNYLIRDLK
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]