| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is lpxP [H]
Identifier: 220932725
GI number: 220932725
Start: 2020309
End: 2021178
Strand: Reverse
Name: lpxP [H]
Synonym: Hore_18900
Alternate gene names: 220932725
Gene position: 2021178-2020309 (Counterclockwise)
Preceding gene: 220932726
Following gene: 220932724
Centisome position: 78.4
GC content: 43.91
Gene sequence:
>870_bases ATGGTGAAGAATATTATACTCTATTTGGTCTTTGAAGGTTTTTTACTATTTATCAGAATATTACCCGGTTTTTTACGCCA GATGGTGGGTCTTTTTTTCGGTAAGGTTCTTTATTATCTACCGGGAAACCGTAAAAAAGTGGCTTATAATAATTTGAAAA TGGCTTTCGATGATTTATCAGATGACAGGATAAAGGAAATCATCAGGAAGGTTTATATAAACCTGGGGTTTATGCTGGTC GAATATGCTCTGACCCCGGGACTTAATAAGGATAATATGACTAAACATATTGAGCTGGAAGGGGAAGAGCACCTGAAAAA GGCCTTTGACCGGGGAAAAGGTGTTATTGTCTACGGTGCCCATTTTGGTAACTGGGAATGGATGGGGATTGCCATCTCCC TTATGGGGTATCCCATGGCTGCCATTGTCCAGGAACAGAATAACTCCTATTTTGACAGAAGGATTAACCAGATGAGACAG CAAAAGGGAGTTGAGACCATACAGAGAGGGATGTCGGTCCGGAAGGCCTTTAAGGCCCTGAAAGAGGGTAAATGTCTTCT TATCCTCGGTGACCAGGATGCCAGGAGCCGGGGCTGGAGATTAAAATTTTTCGGGAAAACGGCCTCTACATTTCCCGGGG CTGTACAGCTGGCCAGAAGGACAGGGGCCCTGATTGTTCCTGCCTTTATGGTCCGGAAATCCCGGGGGAAGCACAGATTG AAGTTTTACCGGCCCATTGAAATAGGGGCTGAGGCTTCCATGGAAGAACAGAAAGAGTTTTTACAGGAGTTAAATCATAT TACAGAATCGGTTATAAAAAAATATCCCGACCACTGGCTATGGCTACACCGTCGCTGGAAAACTTATTAA
Upstream 100 bases:
>100_bases TAATGACCTGCCGGTAGTCGAAGATGGGAAGCCAGTGGGAATGCTTAACTTCCAGGACCTGTTAAGGGCCCGGGTCTTTT AGGGAAAAGATGGGGTGGAT
Downstream 100 bases:
>100_bases GCTTTAGAAGGTGTTTATCATTTGAAGGTTTATCAAATGAGTAAAGGGGGGCTGGATCCAGATGTTTATATTTTACTTAA TCTATAATCTGCTCTTAATA
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MVKNIILYLVFEGFLLFIRILPGFLRQMVGLFFGKVLYYLPGNRKKVAYNNLKMAFDDLSDDRIKEIIRKVYINLGFMLV EYALTPGLNKDNMTKHIELEGEEHLKKAFDRGKGVIVYGAHFGNWEWMGIAISLMGYPMAAIVQEQNNSYFDRRINQMRQ QKGVETIQRGMSVRKAFKALKEGKCLLILGDQDARSRGWRLKFFGKTASTFPGAVQLARRTGALIVPAFMVRKSRGKHRL KFYRPIEIGAEASMEEQKEFLQELNHITESVIKKYPDHWLWLHRRWKTY
Sequences:
>Translated_289_residues MVKNIILYLVFEGFLLFIRILPGFLRQMVGLFFGKVLYYLPGNRKKVAYNNLKMAFDDLSDDRIKEIIRKVYINLGFMLV EYALTPGLNKDNMTKHIELEGEEHLKKAFDRGKGVIVYGAHFGNWEWMGIAISLMGYPMAAIVQEQNNSYFDRRINQMRQ QKGVETIQRGMSVRKAFKALKEGKCLLILGDQDARSRGWRLKFFGKTASTFPGAVQLARRTGALIVPAFMVRKSRGKHRL KFYRPIEIGAEASMEEQKEFLQELNHITESVIKKYPDHWLWLHRRWKTY >Mature_289_residues MVKNIILYLVFEGFLLFIRILPGFLRQMVGLFFGKVLYYLPGNRKKVAYNNLKMAFDDLSDDRIKEIIRKVYINLGFMLV EYALTPGLNKDNMTKHIELEGEEHLKKAFDRGKGVIVYGAHFGNWEWMGIAISLMGYPMAAIVQEQNNSYFDRRINQMRQ QKGVETIQRGMSVRKAFKALKEGKCLLILGDQDARSRGWRLKFFGKTASTFPGAVQLARRTGALIVPAFMVRKSRGKHRL KFYRPIEIGAEASMEEQKEFLQELNHITESVIKKYPDHWLWLHRRWKTY
Specific function: Unknown
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI87082094, Length=247, Percent_Identity=28.7449392712551, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787292, Length=278, Percent_Identity=25.1798561151079, Blast_Score=89, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 33778; Mature: 33778
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS00636 DNAJ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKNIILYLVFEGFLLFIRILPGFLRQMVGLFFGKVLYYLPGNRKKVAYNNLKMAFDDLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCC DDRIKEIIRKVYINLGFMLVEYALTPGLNKDNMTKHIELEGEEHLKKAFDRGKGVIVYGA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECC HFGNWEWMGIAISLMGYPMAAIVQEQNNSYFDRRINQMRQQKGVETIQRGMSVRKAFKAL CCCCEEHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGKCLLILGDQDARSRGWRLKFFGKTASTFPGAVQLARRTGALIVPAFMVRKSRGKHRL HCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCE KFYRPIEIGAEASMEEQKEFLQELNHITESVIKKYPDHWLWLHRRWKTY EEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MVKNIILYLVFEGFLLFIRILPGFLRQMVGLFFGKVLYYLPGNRKKVAYNNLKMAFDDLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCC DDRIKEIIRKVYINLGFMLVEYALTPGLNKDNMTKHIELEGEEHLKKAFDRGKGVIVYGA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECC HFGNWEWMGIAISLMGYPMAAIVQEQNNSYFDRRINQMRQQKGVETIQRGMSVRKAFKAL CCCCEEHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGKCLLILGDQDARSRGWRLKFFGKTASTFPGAVQLARRTGALIVPAFMVRKSRGKHRL HCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCE KFYRPIEIGAEASMEEQKEFLQELNHITESVIKKYPDHWLWLHRRWKTY EEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]