| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is hisJ [H]
Identifier: 220932713
GI number: 220932713
Start: 2005123
End: 2005857
Strand: Reverse
Name: hisJ [H]
Synonym: Hore_18770
Alternate gene names: 220932713
Gene position: 2005857-2005123 (Counterclockwise)
Preceding gene: 220932715
Following gene: 220932712
Centisome position: 77.8
GC content: 36.87
Gene sequence:
>735_bases ATGAAAAAATTATCAATTATATTAGTAACACTGTTACTGGTAATGCTGGCAGGGATAGGTGTGTCTGCTGAAAAATATGT AGTGGGGACCAGTGCTGATTTTCCACCATTTGAGTATGTTGAAGACGGGGAATTTGTTGGTTTTGACATGGATTTAATAA GGGCCATTGCAGAGGTTGAGGGTTTTGAAGTAGAGATTAGAGATATGAGTTTTGATTCCCTGATTGCAGCCTTGAAAAGC GGTAATATTGATATTGCAATTGCCGGTATGACCATAACTGAAAAGAGGGAAAAGGTTGTTGATTTCTCTATTCCTTACTA TACGGCAAACCAGAGTGTAATTGTTAAAGAGGATTCTGACCTTAATTTAACAGTGCTTTACGGTGACAATAATGTTGGGG TTCAGACCAGTACTACCGGGGATTTATGGGTAACAGATAATTTAGAAAAGAAAGGTATTTTAACCGGTAAAGTAGTAAGA TATGACACCTTTGTTCTGGCTGTAACTGACCTGGTTAATGGAAACCTTGATGCTATTGTCCTTGATAGCCCTGTGGCTGA AAGGTTTGTGGATAGCCATCCCCTGAAGGAAGTTGGAATAATAATTACAGGTGAAGAGTATGGTATTGTCGTTAATGAGG GTAATAAGGACCTTTTAAATAAAATAAATAACGGAATTAAAAAATTACAGGAATCTGGTGTGATATCTAAACTGGTTGGT AAGTATTTTAAATAA
Upstream 100 bases:
>100_bases CTTGCATAACTATAGATTTTCATGTATACTATAGTTTAATAGAAAATCAGTTGCAACTGTTTTTTAGAAAGAGTTTTTAA ATAAACAAGGGGGTTTTTTA
Downstream 100 bases:
>100_bases GATTTATATATCAAGGGTCCTCTCATGATTAAATTTTCCGGTTATATAAAAATGAGCAACTGGATTAGCATCGAGGCCAT TGAGCCTCCTTGCGGTTACA
Product: family 3 extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKKLSIILVTLLLVMLAGIGVSAEKYVVGTSADFPPFEYVEDGEFVGFDMDLIRAIAEVEGFEVEIRDMSFDSLIAALKS GNIDIAIAGMTITEKREKVVDFSIPYYTANQSVIVKEDSDLNLTVLYGDNNVGVQTSTTGDLWVTDNLEKKGILTGKVVR YDTFVLAVTDLVNGNLDAIVLDSPVAERFVDSHPLKEVGIIITGEEYGIVVNEGNKDLLNKINNGIKKLQESGVISKLVG KYFK
Sequences:
>Translated_244_residues MKKLSIILVTLLLVMLAGIGVSAEKYVVGTSADFPPFEYVEDGEFVGFDMDLIRAIAEVEGFEVEIRDMSFDSLIAALKS GNIDIAIAGMTITEKREKVVDFSIPYYTANQSVIVKEDSDLNLTVLYGDNNVGVQTSTTGDLWVTDNLEKKGILTGKVVR YDTFVLAVTDLVNGNLDAIVLDSPVAERFVDSHPLKEVGIIITGEEYGIVVNEGNKDLLNKINNGIKKLQESGVISKLVG KYFK >Mature_244_residues MKKLSIILVTLLLVMLAGIGVSAEKYVVGTSADFPPFEYVEDGEFVGFDMDLIRAIAEVEGFEVEIRDMSFDSLIAALKS GNIDIAIAGMTITEKREKVVDFSIPYYTANQSVIVKEDSDLNLTVLYGDNNVGVQTSTTGDLWVTDNLEKKGILTGKVVR YDTFVLAVTDLVNGNLDAIVLDSPVAERFVDSHPLKEVGIIITGEEYGIVVNEGNKDLLNKINNGIKKLQESGVISKLVG KYFK
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=252, Percent_Identity=34.1269841269841, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1787031, Length=243, Percent_Identity=31.6872427983539, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1787088, Length=251, Percent_Identity=31.8725099601594, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1788228, Length=223, Percent_Identity=29.5964125560538, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788649, Length=252, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1788648, Length=228, Percent_Identity=28.5087719298246, Blast_Score=84, Evalue=9e-18,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26663; Mature: 26663
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSIILVTLLLVMLAGIGVSAEKYVVGTSADFPPFEYVEDGEFVGFDMDLIRAIAEVE CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHCC GFEVEIRDMSFDSLIAALKSGNIDIAIAGMTITEKREKVVDFSIPYYTANQSVIVKEDSD CCEEEEECCCHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEEECCEEECCCEEEEEECCC LNLTVLYGDNNVGVQTSTTGDLWVTDNLEKKGILTGKVVRYDTFVLAVTDLVNGNLDAIV CEEEEEECCCCCCEEECCCCCEEEECCCCCCCCEECEEEEEEEEEEEEEHHHCCCCCEEE LDSPVAERFVDSHPLKEVGIIITGEEYGIVVNEGNKDLLNKINNGIKKLQESGVISKLVG ECCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHH KYFK HHCC >Mature Secondary Structure MKKLSIILVTLLLVMLAGIGVSAEKYVVGTSADFPPFEYVEDGEFVGFDMDLIRAIAEVE CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHCC GFEVEIRDMSFDSLIAALKSGNIDIAIAGMTITEKREKVVDFSIPYYTANQSVIVKEDSD CCEEEEECCCHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEEECCEEECCCEEEEEECCC LNLTVLYGDNNVGVQTSTTGDLWVTDNLEKKGILTGKVVRYDTFVLAVTDLVNGNLDAIV CEEEEEECCCCCCEEECCCCCEEEECCCCCCCCEECEEEEEEEEEEEEEHHHCCCCCEEE LDSPVAERFVDSHPLKEVGIIITGEEYGIVVNEGNKDLLNKINNGIKKLQESGVISKLVG ECCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHH KYFK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1448614 [H]