Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932708

Identifier: 220932708

GI number: 220932708

Start: 1999838

End: 2000881

Strand: Reverse

Name: 220932708

Synonym: Hore_18720

Alternate gene names: NA

Gene position: 2000881-1999838 (Counterclockwise)

Preceding gene: 220932709

Following gene: 220932707

Centisome position: 77.61

GC content: 34.29

Gene sequence:

>1044_bases
GTGGGTAAAAAACAGTATGAGCAGGGGTATACTTTTCTAATAGTTATCTGGGCTTTAGTTATTCTTTCCATTATCTTTGT
TAATTTATATGAGGAGGTACAACTCAATAACAGGCTCACAGAATACCGTATATTACAAAACGAACAAAAAAATATACTCT
TCTCGGCTGTTAATATAGGAATCAATAAACTAAAGAGAGACAAGACAGAATATGACACCAGGAATGATAGCTGGTTAAAA
CCGGTTAATAGAAAGATAAAAGGCATAAATTATAAAGTAAAGATAACTGATGTTGGAAGCAGGTTAAATATAAACTATGA
TAGATTGTCTACTTTAAGGCTATTTTCATGGTGGCCTGAAAGTATTGAAAAGGATTTAAAGGGCAGGGTGATACCTGATA
TACTTCTGCTGAAAGAAGTATTTGATGAAAGTTATCCAGAGGCCAGCGAACTTTTAACTACATTGGGCCAGTACAATGTA
AATACTGACCGGCTTAAAGGTTTTTATATTCTTCTTATAAAATCAGGTATTCGTGATTTCCAGGCTAAATTAATTGTTGA
TAGCCTCAGGAAGGTTAGAGAAGAGAAATATATAAATAAAGTTGAGCTTTTACCTGTTTATATAAAGGGGCTTGATTTAA
ATACTTTTGAAAAAATTAAGCCTTTTCTGACGACAGAGGGGAGAGTTAATATTAATATGGCCCCTGAAGAGGTAGTCGAG
GCAATAATAAGGTCCCTGGACATAAATCCTGATTTAAAGGAAAATTATATAAACAAGATTTTAGAATACCGGGAAGTCAG
GGGTTTTAAGAATATAGACATGCTTGACAAAATAATTGCCAGGCAGGACCGATTAAAACTGGAAAAATACTTTGGTGTAA
CTTCAAGTTATTTTCTAATAAAAGTAGAAGTTACCCGGGGGCCGGTTATACAGACAGCTGAAGCCCTGGTTCATCGGAGT
GAAGACAGGGATAATAAAGGTTATAAAATTCGTATCTTAAGATGGTATGAAAATGTTAGTTACAGGCAGGTTAGATCACA
ATAA

Upstream 100 bases:

>100_bases
TTTAAATTTTGGTTTAAGAAGGATTTTTTTAAAATATATAGAATATTAATTATAAAACATGGATAATTTTTTATTTTTTT
ATAAAAATGTGGTGAAAGCT

Downstream 100 bases:

>100_bases
AGTGTAGAGGTGCTTTATATTGACTAAAAAGTCTTTAAACTATATTTATATTTTATTAATACTTGTATTGCTTGGTAGCA
TTTTTAATTTATGGATGGTG

Product: Type II secretory pathway component PulK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MGKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIGINKLKRDKTEYDTRNDSWLK
PVNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPESIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNV
NTDRLKGFYILLIKSGIRDFQAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVE
AIIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLIKVEVTRGPVIQTAEALVHRS
EDRDNKGYKIRILRWYENVSYRQVRSQ

Sequences:

>Translated_347_residues
MGKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIGINKLKRDKTEYDTRNDSWLK
PVNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPESIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNV
NTDRLKGFYILLIKSGIRDFQAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVE
AIIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLIKVEVTRGPVIQTAEALVHRS
EDRDNKGYKIRILRWYENVSYRQVRSQ
>Mature_346_residues
GKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIGINKLKRDKTEYDTRNDSWLKP
VNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPESIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNVN
TDRLKGFYILLIKSGIRDFQAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVEA
IIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLIKVEVTRGPVIQTAEALVHRSE
DRDNKGYKIRILRWYENVSYRQVRSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41003; Mature: 40872

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIG
CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
INKLKRDKTEYDTRNDSWLKPVNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPE
HHHHHCCCHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCHHHHHHHHHHHHCHH
SIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNVNTDRLKGFYILLIKSGIRDF
HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCEEEEEEHHCHHHH
QAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVE
HHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHCCCEECCCEEEEECCHHHHHH
AIIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLI
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
KVEVTRGPVIQTAEALVHRSEDRDNKGYKIRILRWYENVSYRQVRSQ
EEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHCCC
>Mature Secondary Structure 
GKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIG
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
INKLKRDKTEYDTRNDSWLKPVNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPE
HHHHHCCCHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCHHHHHHHHHHHHCHH
SIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNVNTDRLKGFYILLIKSGIRDF
HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCEEEEEEHHCHHHH
QAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVE
HHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHCCCEECCCEEEEECCHHHHHH
AIIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLI
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
KVEVTRGPVIQTAEALVHRSEDRDNKGYKIRILRWYENVSYRQVRSQ
EEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA