| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932700
Identifier: 220932700
GI number: 220932700
Start: 1993195
End: 1994499
Strand: Reverse
Name: 220932700
Synonym: Hore_18640
Alternate gene names: NA
Gene position: 1994499-1993195 (Counterclockwise)
Preceding gene: 220932701
Following gene: 220932699
Centisome position: 77.36
GC content: 34.48
Gene sequence:
>1305_bases ATGTTAAAAAAAGCAAGGGAAACTTATCTGGAGCTTGGTCAAAACTATTCTAGATTGGTACAGATAAAAAGAGAAAAGAT TTCTTGTGAGATGGTATTTGAGGGAGAAGGTATAAATAACCTTAAAAAGGCTGTCGACTCTGTAGTTTCTGAACTTAAGA GGCTTAAATCAATTAATATTATACTAACACAGAGTGAGGTTTTTTTCAGGTCTTACAGGATTCCCGGGTCCGCCCGGGAT AGAATTGAGGAAATGATCGAGTTAAGGCTATCAACGGATCTACCCCTGGAAAAAAAAGATTTTATATATTCGATTTTTAC CCATAAAACAGGGAAAAACGAACTACAGGTGCTTACCTTTACCAGTAAAAAAGGCTTAATAGAAGAAATTTATAATAGTT TTAATGGTAGAAATATAAGGGTTAAAAGTATTCTACCAGGGGGGTTGATATATTATTTAATTCACCGGGATAAAGAGGAT TTAACTCCTGGCATTTATCTCGATAAAGATAGTCACCAGGGTCACATTACTTTTTTTAATGGTAAGAAAATTTACTTGAA GTCAATTAGACTTGATGGTAATTTTAAAAAAGAGCTTAAGAGAAATATTAATTTATTTATAAATTCCTTAGGTAGCGAGA GAGTAAATCTGGTGATTAATAATAAAAGGGTAGGAACTCTGAATGGGACCATTGACATTACTGACTTAAGTCTTTTTAAT AATATTGAGGATGATGACCATACTCTTTCAAAGTGGGAAAAGGTCTTCCTGTATAAAAAAGATTTGATCAAAGCAAATTT ATTAACAGAAGTTACCTCAGATAAAAGAAGGCAGAGAAACATATCAGGGGTATGGTTTTTGATAATAATTATTATATTAC TTAATGCATACGGGTTTTATGTAAGATATAATAATGACGTTAAATATCTGGCCACTTTAAAAGGGGCAGCTGAAGATTTA AAACCCCTTTTAAATGAAATAAATACCGTTAAAACAGAATATAACCACGTTGTCGGGGAAATAAAAAAGCTTGAAGCTGA ATTACAGGGCAATTACCGGGGTTATTTACCATGGCTAAGAGAACTGGGGGGGATTTTACCTGAGGGGACTGTGATTGAAG AAGTTAGCTTTAAAGACAATAAACTGGTAGCTCTGTCAGGTAGTTCTCCTTCAGCAACAGCTGTTATGGAAAACCTGGAG AAATCAGAATACTTCACCAGGTTGAGGTTTGAAGGTAGTATTACCCGGGAGAATGGTAAAGAGAGATTCAGGATTGCAGG TGAGATAAGTAATGGCCTTAACTAG
Upstream 100 bases:
>100_bases AATAGAAATAGCGGACAGTACATATGGAATCTGGTCAGGTGTTATAGAAATTTTCACCGGGCGTCAATATTGATTATATC CAGTAGGGGGAAGGGTTTTG
Downstream 100 bases:
>100_bases GAGAGAAAAAAAGCTGCTGGTTACAGCTATTATAATAATTGTTACGGTTTCGTTGGTTAAATGGGGGCTTCTTCCTCTGT GGAATAAATACGACCATATC
Product: Fimbrial assembly family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MLKKARETYLELGQNYSRLVQIKREKISCEMVFEGEGINNLKKAVDSVVSELKRLKSINIILTQSEVFFRSYRIPGSARD RIEEMIELRLSTDLPLEKKDFIYSIFTHKTGKNELQVLTFTSKKGLIEEIYNSFNGRNIRVKSILPGGLIYYLIHRDKED LTPGIYLDKDSHQGHITFFNGKKIYLKSIRLDGNFKKELKRNINLFINSLGSERVNLVINNKRVGTLNGTIDITDLSLFN NIEDDDHTLSKWEKVFLYKKDLIKANLLTEVTSDKRRQRNISGVWFLIIIIILLNAYGFYVRYNNDVKYLATLKGAAEDL KPLLNEINTVKTEYNHVVGEIKKLEAELQGNYRGYLPWLRELGGILPEGTVIEEVSFKDNKLVALSGSSPSATAVMENLE KSEYFTRLRFEGSITRENGKERFRIAGEISNGLN
Sequences:
>Translated_434_residues MLKKARETYLELGQNYSRLVQIKREKISCEMVFEGEGINNLKKAVDSVVSELKRLKSINIILTQSEVFFRSYRIPGSARD RIEEMIELRLSTDLPLEKKDFIYSIFTHKTGKNELQVLTFTSKKGLIEEIYNSFNGRNIRVKSILPGGLIYYLIHRDKED LTPGIYLDKDSHQGHITFFNGKKIYLKSIRLDGNFKKELKRNINLFINSLGSERVNLVINNKRVGTLNGTIDITDLSLFN NIEDDDHTLSKWEKVFLYKKDLIKANLLTEVTSDKRRQRNISGVWFLIIIIILLNAYGFYVRYNNDVKYLATLKGAAEDL KPLLNEINTVKTEYNHVVGEIKKLEAELQGNYRGYLPWLRELGGILPEGTVIEEVSFKDNKLVALSGSSPSATAVMENLE KSEYFTRLRFEGSITRENGKERFRIAGEISNGLN >Mature_434_residues MLKKARETYLELGQNYSRLVQIKREKISCEMVFEGEGINNLKKAVDSVVSELKRLKSINIILTQSEVFFRSYRIPGSARD RIEEMIELRLSTDLPLEKKDFIYSIFTHKTGKNELQVLTFTSKKGLIEEIYNSFNGRNIRVKSILPGGLIYYLIHRDKED LTPGIYLDKDSHQGHITFFNGKKIYLKSIRLDGNFKKELKRNINLFINSLGSERVNLVINNKRVGTLNGTIDITDLSLFN NIEDDDHTLSKWEKVFLYKKDLIKANLLTEVTSDKRRQRNISGVWFLIIIIILLNAYGFYVRYNNDVKYLATLKGAAEDL KPLLNEINTVKTEYNHVVGEIKKLEAELQGNYRGYLPWLRELGGILPEGTVIEEVSFKDNKLVALSGSSPSATAVMENLE KSEYFTRLRFEGSITRENGKERFRIAGEISNGLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49940; Mature: 49940
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKARETYLELGQNYSRLVQIKREKISCEMVFEGEGINNLKKAVDSVVSELKRLKSINI CCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEE ILTQSEVFFRSYRIPGSARDRIEEMIELRLSTDLPLEKKDFIYSIFTHKTGKNELQVLTF EEECCHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCCCEEEEEE TSKKGLIEEIYNSFNGRNIRVKSILPGGLIYYLIHRDKEDLTPGIYLDKDSHQGHITFFN ECCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEC GKKIYLKSIRLDGNFKKELKRNINLFINSLGSERVNLVINNKRVGTLNGTIDITDLSLFN CCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCEEEEEEEHHHC NIEDDDHTLSKWEKVFLYKKDLIKANLLTEVTSDKRRQRNISGVWFLIIIIILLNAYGFY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEE VRYNNDVKYLATLKGAAEDLKPLLNEINTVKTEYNHVVGEIKKLEAELQGNYRGYLPWLR EEECCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH ELGGILPEGTVIEEVSFKDNKLVALSGSSPSATAVMENLEKSEYFTRLRFEGSITRENGK HHCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCEECCCCC ERFRIAGEISNGLN CEEEEEEECCCCCC >Mature Secondary Structure MLKKARETYLELGQNYSRLVQIKREKISCEMVFEGEGINNLKKAVDSVVSELKRLKSINI CCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEE ILTQSEVFFRSYRIPGSARDRIEEMIELRLSTDLPLEKKDFIYSIFTHKTGKNELQVLTF EEECCHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCCCEEEEEE TSKKGLIEEIYNSFNGRNIRVKSILPGGLIYYLIHRDKEDLTPGIYLDKDSHQGHITFFN ECCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEC GKKIYLKSIRLDGNFKKELKRNINLFINSLGSERVNLVINNKRVGTLNGTIDITDLSLFN CCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCEEEEEEEHHHC NIEDDDHTLSKWEKVFLYKKDLIKANLLTEVTSDKRRQRNISGVWFLIIIIILLNAYGFY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEE VRYNNDVKYLATLKGAAEDLKPLLNEINTVKTEYNHVVGEIKKLEAELQGNYRGYLPWLR EEECCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH ELGGILPEGTVIEEVSFKDNKLVALSGSSPSATAVMENLEKSEYFTRLRFEGSITRENGK HHCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCEECCCCC ERFRIAGEISNGLN CEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA