| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932701
Identifier: 220932701
GI number: 220932701
Start: 1994527
End: 1995099
Strand: Reverse
Name: 220932701
Synonym: Hore_18650
Alternate gene names: NA
Gene position: 1995099-1994527 (Counterclockwise)
Preceding gene: 220932702
Following gene: 220932700
Centisome position: 77.39
GC content: 33.86
Gene sequence:
>573_bases ATGAATGAAAGAGGGTTCAGCCTGCTGGAGGTTTTAATAGCCATTACCCTGACCGGTATAATTATTGGTGTCATCCTGTC TTCATTAGACATTGGTTTATCAACCTGGAAACGGGTTCAGTCTGATTCATATAATCTCCAGAACCAGCAGGTTGTGTTTA AATATCTAGAGTCTGATTTGCATAATTTATTTTATTCAAATCATGTTGATAAAAAACTTTTTTATTACGGGTATGACGGC TTTCTTTTTTATACTATCAATAAAGAAGAGATAAGGCAGGTCAATTATACTATTAATTACAGGAGAGGTCTTCTTATCAG GGAAACATATCCGGTAACCGGTACTGATTTTAAAATAGATAAACAAAAAAAAGAAGTCATTAATTTTTTAGAGAATACTG AAATTAAGAATGTCAGGTTTTATTTTTATGACCATCATAATAAATATTGGAGAAATTACTGGTCATACCGGGAGATAGGA TATTACCCCTCCCTGGTCAAAATAGAAATAGCGGACAGTACATATGGAATCTGGTCAGGTGTTATAGAAATTTTCACCGG GCGTCAATATTGA
Upstream 100 bases:
>100_bases GAAAACGGATTAACGAGGTTAAATATCAATGTAGAATGGCAGGGCAGGAATGGTTATAAACAACAAACTTTTTCCCGGTT ATTATTGAGGACTGAGGGTT
Downstream 100 bases:
>100_bases TTATATCCAGTAGGGGGAAGGGTTTTGATGTTAAAAAAAGCAAGGGAAACTTATCTGGAGCTTGGTCAAAACTATTCTAG ATTGGTACAGATAAAAAGAG
Product: prepilin-type N-terminal cleavage/methylation domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNERGFSLLEVLIAITLTGIIIGVILSSLDIGLSTWKRVQSDSYNLQNQQVVFKYLESDLHNLFYSNHVDKKLFYYGYDG FLFYTINKEEIRQVNYTINYRRGLLIRETYPVTGTDFKIDKQKKEVINFLENTEIKNVRFYFYDHHNKYWRNYWSYREIG YYPSLVKIEIADSTYGIWSGVIEIFTGRQY
Sequences:
>Translated_190_residues MNERGFSLLEVLIAITLTGIIIGVILSSLDIGLSTWKRVQSDSYNLQNQQVVFKYLESDLHNLFYSNHVDKKLFYYGYDG FLFYTINKEEIRQVNYTINYRRGLLIRETYPVTGTDFKIDKQKKEVINFLENTEIKNVRFYFYDHHNKYWRNYWSYREIG YYPSLVKIEIADSTYGIWSGVIEIFTGRQY >Mature_190_residues MNERGFSLLEVLIAITLTGIIIGVILSSLDIGLSTWKRVQSDSYNLQNQQVVFKYLESDLHNLFYSNHVDKKLFYYGYDG FLFYTINKEEIRQVNYTINYRRGLLIRETYPVTGTDFKIDKQKKEVINFLENTEIKNVRFYFYDHHNKYWRNYWSYREIG YYPSLVKIEIADSTYGIWSGVIEIFTGRQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22782; Mature: 22782
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERGFSLLEVLIAITLTGIIIGVILSSLDIGLSTWKRVQSDSYNLQNQQVVFKYLESDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH HNLFYSNHVDKKLFYYGYDGFLFYTINKEEIRQVNYTINYRRGLLIRETYPVTGTDFKID HHHHHCCCCCCEEEEEECCCEEEEEECHHHHHEECEEEEECCCEEEEECCCCCCCCEEEC KQKKEVINFLENTEIKNVRFYFYDHHNKYWRNYWSYREIGYYPSLVKIEIADSTYGIWSG HHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHCCHHHCCCCCCEEEEEECCCCCHHHHH VIEIFTGRQY HHHHHCCCCC >Mature Secondary Structure MNERGFSLLEVLIAITLTGIIIGVILSSLDIGLSTWKRVQSDSYNLQNQQVVFKYLESDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH HNLFYSNHVDKKLFYYGYDGFLFYTINKEEIRQVNYTINYRRGLLIRETYPVTGTDFKID HHHHHCCCCCCEEEEEECCCEEEEEECHHHHHEECEEEEECCCEEEEECCCCCCCCEEEC KQKKEVINFLENTEIKNVRFYFYDHHNKYWRNYWSYREIGYYPSLVKIEIADSTYGIWSG HHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHCCHHHCCCCCCEEEEEECCCCCHHHHH VIEIFTGRQY HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA