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The map label for this gene is ydjH [C]

Identifier: 220932658

GI number: 220932658

Start: 1945042

End: 1946004

Strand: Reverse

Name: ydjH [C]

Synonym: Hore_18220

Alternate gene names: 220932658

Gene position: 1946004-1945042 (Counterclockwise)

Preceding gene: 220932659

Following gene: 220932657

Centisome position: 75.48

GC content: 45.17

Gene sequence:

>963_bases
GTGGGTATTCTAAATAAAAACTTTTCCCTGTCAAAGGGAGACCTGGATGTTGTAAGTCTCGGTGAAATACTGGTAGACAT
GATTTCTACAGAAGAGGTTAATTCTTTATCACAGAGCAGGGAATATACCAGGCATTTCGGGGGATCACCGGCGAATATAG
CCGTTAATTTAAGTCGCCTCGGGAAAAAGGTGGCTCTCATAAGTCGGCTCGGGGCAGATGCTTTTGGTAACTACCTGCTT
GATGTTCTGAAAGGAGAACAGATAATTACAGATGGTATTCAGCAGGATAAGGAGAGAAGGACCACCATTGTATATGTCAG
TAAGAGCACCCGGACCCCTGACTGGCTTCCTTACCGGGAGGCTGATATGTATTTACAGGAAGATGACATTATTTTTGAAC
TGATAAAAAGGAGCAAGGTTTTTCATCTATCGACATTTATTTTATCAAGGAAACCGGCCCGTGATACGGCCATAAAAGCC
TTTAACTATGCCCGCGAGCAGGGGAAGATTGTCTGCTTCGATCCCTGTTACCGCAAGGTATTGTGGCCTGAAGGTGATGA
TGGAGCAGGGGTTGTTGAGGAAATAATATCGAGGGCTGATTTTGTGAAACCTTCTCTCGATGATGCCAGGCATCTGTTTG
GCCCTGATAGTCCTGAAAACTATGTGAAACGTTACCTGGAGCTTGGGGTTAAGGCTGTTATCCTGACCCTGGGAGAAGAA
GGGGTCATAGCATCAGATGGTGAGGAGATTATTAGAATACCGGCTTTTTCAGAAGACGCGGTGGATGTAACCGGAGCCGG
TGATGCCTTCTGGAGTGGTTTTATCTGCGGACTTTTAGATGGATATACTGTAAAGAGGTCTATTAAACTGGGTAATGGAG
TGGCCGCTTTCAAGATCAGGGGGGTAGGGGCACTGTCACCGGTTCCCTCTAAAGAAGACATAATCAAAGAATATAACATT
TAA

Upstream 100 bases:

>100_bases
TTTACGAATCGAAAAATCAATAATAAAAGCCTTTAAAAGTTTAAAATATTTTTTCTACATATAAATAATAAATATCACAG
TGAAGGGAGAAGGTGTTATT

Downstream 100 bases:

>100_bases
GGAGTGGTAGAGATGACCCGTATTAAACATGTAGCTTTTTTAAATCCCCAGGGTAATTTTGACCCCGCTGACAGTTACTG
GACAGAACACCCTGATTTCG

Product: Fructokinase

Products: ADP; 6-phospho-2-dehydro-3-deoxy-D-gluconate

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MGILNKNFSLSKGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLL
DVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKA
FNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPENYVKRYLELGVKAVILTLGEE
GVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIKEYNI

Sequences:

>Translated_320_residues
MGILNKNFSLSKGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLL
DVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKA
FNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPENYVKRYLELGVKAVILTLGEE
GVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIKEYNI
>Mature_319_residues
GILNKNFSLSKGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLD
VLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAF
NYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPENYVKRYLELGVKAVILTLGEEG
VIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIKEYNI

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=319, Percent_Identity=28.5266457680251, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI87082281, Length=280, Percent_Identity=27.8571428571429, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082343, Length=280, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789775, Length=265, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790193, Length=279, Percent_Identity=24.3727598566308, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: 2.7.1.45

Molecular weight: Translated: 35392; Mature: 35261

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILNKNFSLSKGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
GKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYRE
HHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
ADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKV
CCCEECCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHH
LWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPENYVKRYLELGVKAVILTLGEE
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCHHEEEEEECCC
GVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIR
CEEECCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEE
GVGALSPVPSKEDIIKEYNI
CCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
GILNKNFSLSKGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
GKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYRE
HHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
ADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKV
CCCEECCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHH
LWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPENYVKRYLELGVKAVILTLGEE
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCHHEEEEEECCC
GVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIR
CEEECCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEE
GVGALSPVPSKEDIIKEYNI
CCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 2-dehydro-3-deoxy-D-gluconate

Specific reaction: ATP + 2-dehydro-3-deoxy-D-gluconate = ADP + 6-phospho-2-dehydro-3-deoxy-D-gluconate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]