| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932578
Identifier: 220932578
GI number: 220932578
Start: 1860985
End: 1861674
Strand: Reverse
Name: 220932578
Synonym: Hore_17420
Alternate gene names: NA
Gene position: 1861674-1860985 (Counterclockwise)
Preceding gene: 220932579
Following gene: 220932577
Centisome position: 72.21
GC content: 31.45
Gene sequence:
>690_bases ATGTCTTTATTTAAAAAAAGTAACCTGTATATTCTGCCTTTTATCTTAATATTGTTGATGGGGATAACTTTTGCTGCCCG GGGAGAAGCAGAGATAACAGGCAGTATTGAAAATGGAACAAAAAGAAATATCGACCTGGAAATAGATGATGGTAAAAAGA TTAAAGAATTGGATGATAGAAATTTTTATAATCTCTGCTGGGTAAAGTATAAAAAAGAACTGGAATCCGGAGATTATTAT TATATTAAACTGGAATATTATAAAAACAAATATATGGATAAGACTTATTATAATAATAAAACCTTGAATATCTGGGGTGT TTATTCGTGGGAAATCAATAAAAGATTAACAAATAAATATGAAGTAAATTTTAAGGACAAAAACTATTATATCGAAGATT ACGAGTATAAATCCTACCTGGGGGCAAAATTGAAATGTGAATTTGATTATGAGCTCAATGATAGACATGAATATTCAGCC TATATACAGAGGTACTGGGAGGATAATAAAACAACAGATGATAGAGATAATGTGTCTGATACTCTGTCTGTTACCTGGGA TTATGAAGTAAATTCAAAAACAGAGTTAACAACAAATATCAAGTTATGGCAGGAGGAACATCCCTGGGAGTCGAGTTCCA CCAATAAATATGAGAAGACCATGTCTGTGGGGTTTGAGTATGAACTTTAA
Upstream 100 bases:
>100_bases AAAAAAGAAAAGCATATTTATGCTTTTTAAAAAAGTGAGGTGAACAGGAGATAAACCAAGGGTATAAAAATATACGAAAA ATGGAGGAATTAAAACGAAA
Downstream 100 bases:
>100_bases ACCACAAAAAGATAATATACAACCAGAATCCTGGCTGGAATAAGTTCAGTCAGGATTTTTTTATTTATCTTTTTAACGTC ATAGACTTCATATGTGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDRNFYNLCWVKYKKELESGDYY YIKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKYEVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSA YIQRYWEDNKTTDDRDNVSDTLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL
Sequences:
>Translated_229_residues MSLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDRNFYNLCWVKYKKELESGDYY YIKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKYEVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSA YIQRYWEDNKTTDDRDNVSDTLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL >Mature_228_residues SLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDRNFYNLCWVKYKKELESGDYYY IKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKYEVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSAY IQRYWEDNKTTDDRDNVSDTLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27795; Mature: 27664
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDR CCCCCCCCEEEHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEEEEECCCCCCHHCCCC NFYNLCWVKYKKELESGDYYYIKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKY CCEEEEEEEEEHHCCCCCEEEEEEEEECCCCCCCEEECCCEEEEEEEEEEEECCCCCCEE EVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSAYIQRYWEDNKTTDDRDNVSD EEEEECCCEEEECCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC TLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL EEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCHHHHEEECEEECC >Mature Secondary Structure SLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDR CCCCCCCEEEHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEEEEECCCCCCHHCCCC NFYNLCWVKYKKELESGDYYYIKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKY CCEEEEEEEEEHHCCCCCEEEEEEEEECCCCCCCEEECCCEEEEEEEEEEEECCCCCCEE EVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSAYIQRYWEDNKTTDDRDNVSD EEEEECCCEEEECCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC TLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL EEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCHHHHEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA