| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932496
Identifier: 220932496
GI number: 220932496
Start: 1783965
End: 1784363
Strand: Reverse
Name: 220932496
Synonym: Hore_16590
Alternate gene names: NA
Gene position: 1784363-1783965 (Counterclockwise)
Preceding gene: 220932497
Following gene: 220932495
Centisome position: 69.21
GC content: 37.34
Gene sequence:
>399_bases ATGGTTAAATTTGATTTCAGGAAAACAATTATAAGTGATTTAATTATAATCGCCGGGGTTATCCTGGTTGGGAGTGGTAT TTTCCTGGTTTTTGCTGAAGATTCTACAGCCGCATACCCATCTCCAGCTATATATGATATTGATAGTTTTGACCTTACCC ATCGGGAACTTGAATATAAATTTGAAGAAAAACCAGAATTTGTAGAGGTTAAGATACCCAGAGGGGCAACCGGTCTCGAA GTGGCCAGGATTCTGGCTGATAAAGGGCTGGGAGAGAGTCAGGAATTTCTGAAATACATTAACCTGTTCCGACTTGAGTC CCGAATTAAAGCAGGGGAATATACTTTTGCCAAAAAAGAAGGTATTTTAAATATTTTGTCAAAAATAATAATTAAGTAG
Upstream 100 bases:
>100_bases CAGGGGTATTCCCCTGAAAAAATTGCTAAAAAGCTTGATTTAGGGATCCGGGAGACCAGGCTAATACTTAGATTATATAA AGGAAAGAGGTCCGGTGAAG
Downstream 100 bases:
>100_bases AAAAAACAGTAGAAGTCAGTTATTTTGTATCTGGTTTTAAAAATTTTACAGATGGTCTAATAAAAGGGCTTTTTAAAAGG CTTGATTTAAAAATGTATAT
Product: Aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MVKFDFRKTIISDLIIIAGVILVGSGIFLVFAEDSTAAYPSPAIYDIDSFDLTHRELEYKFEEKPEFVEVKIPRGATGLE VARILADKGLGESQEFLKYINLFRLESRIKAGEYTFAKKEGILNILSKIIIK
Sequences:
>Translated_132_residues MVKFDFRKTIISDLIIIAGVILVGSGIFLVFAEDSTAAYPSPAIYDIDSFDLTHRELEYKFEEKPEFVEVKIPRGATGLE VARILADKGLGESQEFLKYINLFRLESRIKAGEYTFAKKEGILNILSKIIIK >Mature_132_residues MVKFDFRKTIISDLIIIAGVILVGSGIFLVFAEDSTAAYPSPAIYDIDSFDLTHRELEYKFEEKPEFVEVKIPRGATGLE VARILADKGLGESQEFLKYINLFRLESRIKAGEYTFAKKEGILNILSKIIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14907; Mature: 14907
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKFDFRKTIISDLIIIAGVILVGSGIFLVFAEDSTAAYPSPAIYDIDSFDLTHRELEYK CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHCC FEEKPEFVEVKIPRGATGLEVARILADKGLGESQEFLKYINLFRLESRIKAGEYTFAKKE CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH GILNILSKIIIK HHHHHHHHHHCC >Mature Secondary Structure MVKFDFRKTIISDLIIIAGVILVGSGIFLVFAEDSTAAYPSPAIYDIDSFDLTHRELEYK CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHCC FEEKPEFVEVKIPRGATGLEVARILADKGLGESQEFLKYINLFRLESRIKAGEYTFAKKE CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH GILNILSKIIIK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA