| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932497
Identifier: 220932497
GI number: 220932497
Start: 1784356
End: 1784937
Strand: Reverse
Name: 220932497
Synonym: Hore_16600
Alternate gene names: NA
Gene position: 1784937-1784356 (Counterclockwise)
Preceding gene: 220932498
Following gene: 220932496
Centisome position: 69.23
GC content: 37.97
Gene sequence:
>582_bases ATGGGCTGGTTTTTGATTTTGGCAGGTAGTTTATTTATTGTGCTTGGTTTTTATTTTAAATACAGAGGGTACCAGCAGAT TAAGGTTTTTATCTATAGAACAGAAGCAGCCACCAGGAAAATTACTGCAGATGGTATTGTAGAAGATACTGATGAAGATA TTATAAAAGAAACTAAAAAGGATACTACTGATGGAGATACCACCGGTCCTTCTGTGGCAGGAAATGATATAAGAGAAGAT ACTGATTTTCTGGAAAGGGTTCAACGGCTTAAAAACATTAGTCAGAACCTGGATGTTATCCTGGCTGAAATCCAGCGAAA AGAAGATGAAATCAAAAAGGCAGTTAGGAACCTGGAGGCTTATGAGGACCAGGACAGGAAAGTTCATTTTAATGATATCT TCTATAAAACCTATGAAGAACTTAAGGGGCAACATCTTCCTGAGAAATACCGTGACATTATTGCCCTTTCTGAACAGGGG TATTCCCCTGAAAAAATTGCTAAAAAGCTTGATTTAGGGATCCGGGAGACCAGGCTAATACTTAGATTATATAAAGGAAA GAGGTCCGGTGAAGATGGTTAA
Upstream 100 bases:
>100_bases TAAGGAGCAAAATAATAACAGTGATAATGAAGACAAACACCGTCCTGATGATGGTAAGGGTTTTTTTATCGATGTTAAGG TTTGAAACGGGAGTGGTAAA
Downstream 100 bases:
>100_bases ATTTGATTTCAGGAAAACAATTATAAGTGATTTAATTATAATCGCCGGGGTTATCCTGGTTGGGAGTGGTATTTTCCTGG TTTTTGCTGAAGATTCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MGWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKKDTTDGDTTGPSVAGNDIRED TDFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEAYEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQG YSPEKIAKKLDLGIRETRLILRLYKGKRSGEDG
Sequences:
>Translated_193_residues MGWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKKDTTDGDTTGPSVAGNDIRED TDFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEAYEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQG YSPEKIAKKLDLGIRETRLILRLYKGKRSGEDG >Mature_192_residues GWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKKDTTDGDTTGPSVAGNDIREDT DFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEAYEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQGY SPEKIAKKLDLGIRETRLILRLYKGKRSGEDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22436; Mature: 22305
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKK CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHC DTTDGDTTGPSVAGNDIREDTDFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQGYSPEKIAKKLDLGIRETRLI HCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH LRLYKGKRSGEDG HHHHHCCCCCCCC >Mature Secondary Structure GWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKK CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHC DTTDGDTTGPSVAGNDIREDTDFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQGYSPEKIAKKLDLGIRETRLI HCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH LRLYKGKRSGEDG HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA