Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932497

Identifier: 220932497

GI number: 220932497

Start: 1784356

End: 1784937

Strand: Reverse

Name: 220932497

Synonym: Hore_16600

Alternate gene names: NA

Gene position: 1784937-1784356 (Counterclockwise)

Preceding gene: 220932498

Following gene: 220932496

Centisome position: 69.23

GC content: 37.97

Gene sequence:

>582_bases
ATGGGCTGGTTTTTGATTTTGGCAGGTAGTTTATTTATTGTGCTTGGTTTTTATTTTAAATACAGAGGGTACCAGCAGAT
TAAGGTTTTTATCTATAGAACAGAAGCAGCCACCAGGAAAATTACTGCAGATGGTATTGTAGAAGATACTGATGAAGATA
TTATAAAAGAAACTAAAAAGGATACTACTGATGGAGATACCACCGGTCCTTCTGTGGCAGGAAATGATATAAGAGAAGAT
ACTGATTTTCTGGAAAGGGTTCAACGGCTTAAAAACATTAGTCAGAACCTGGATGTTATCCTGGCTGAAATCCAGCGAAA
AGAAGATGAAATCAAAAAGGCAGTTAGGAACCTGGAGGCTTATGAGGACCAGGACAGGAAAGTTCATTTTAATGATATCT
TCTATAAAACCTATGAAGAACTTAAGGGGCAACATCTTCCTGAGAAATACCGTGACATTATTGCCCTTTCTGAACAGGGG
TATTCCCCTGAAAAAATTGCTAAAAAGCTTGATTTAGGGATCCGGGAGACCAGGCTAATACTTAGATTATATAAAGGAAA
GAGGTCCGGTGAAGATGGTTAA

Upstream 100 bases:

>100_bases
TAAGGAGCAAAATAATAACAGTGATAATGAAGACAAACACCGTCCTGATGATGGTAAGGGTTTTTTTATCGATGTTAAGG
TTTGAAACGGGAGTGGTAAA

Downstream 100 bases:

>100_bases
ATTTGATTTCAGGAAAACAATTATAAGTGATTTAATTATAATCGCCGGGGTTATCCTGGTTGGGAGTGGTATTTTCCTGG
TTTTTGCTGAAGATTCTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MGWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKKDTTDGDTTGPSVAGNDIRED
TDFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEAYEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQG
YSPEKIAKKLDLGIRETRLILRLYKGKRSGEDG

Sequences:

>Translated_193_residues
MGWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKKDTTDGDTTGPSVAGNDIRED
TDFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEAYEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQG
YSPEKIAKKLDLGIRETRLILRLYKGKRSGEDG
>Mature_192_residues
GWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKKDTTDGDTTGPSVAGNDIREDT
DFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEAYEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQGY
SPEKIAKKLDLGIRETRLILRLYKGKRSGEDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22436; Mature: 22305

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKK
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHC
DTTDGDTTGPSVAGNDIREDTDFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQGYSPEKIAKKLDLGIRETRLI
HCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
LRLYKGKRSGEDG
HHHHHCCCCCCCC
>Mature Secondary Structure 
GWFLILAGSLFIVLGFYFKYRGYQQIKVFIYRTEAATRKITADGIVEDTDEDIIKETKK
CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHC
DTTDGDTTGPSVAGNDIREDTDFLERVQRLKNISQNLDVILAEIQRKEDEIKKAVRNLEA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEDQDRKVHFNDIFYKTYEELKGQHLPEKYRDIIALSEQGYSPEKIAKKLDLGIRETRLI
HCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
LRLYKGKRSGEDG
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA