| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932488
Identifier: 220932488
GI number: 220932488
Start: 1775556
End: 1776104
Strand: Reverse
Name: 220932488
Synonym: Hore_16510
Alternate gene names: NA
Gene position: 1776104-1775556 (Counterclockwise)
Preceding gene: 220932489
Following gene: 220932487
Centisome position: 68.89
GC content: 39.53
Gene sequence:
>549_bases ATGAGAAGGTTAATATCAAAGCCAGAGGGACATGCTGGAATCTTTTTTATCGTGGTTTTTGTGGTAATGTCTTTAGTCTC TATCAGGGCTTCAGCCGGTCCTGAACTGGATACTGTCCATTACATAGTAAGTGGACAGGGAACAACAATAAGTTCTTTAA AACTTGATTTAGGTTATAAACTCGATGACATTAATAATCTGGACCTTCTGGGGGTTTATAATGGTGAAGACATAAAGATG CAGGGCACCTGGAATATAAGATTTTTAAAGAGGAGCCTTTATAGTTTACAATTAGGTTTATCATTAACCACCGGCTTGAA TGAATCGGGTTTTGGTAAGGCCATCGGACTGAGTGGTGAAGGGATATATCTGGTCCAGAACCGGTATTTCTGGAATATAG ATTATTTTATTGATGAAAAAGCCTGGGTCTATGGAGCTGGCCTTGGTCTGCCAGTAACTCCTGATACTTTCCTGACTCTC GGGGTCGGGAATTCCTACTGGGACCGTAATGATATCAACTTAAATATTGGAATAAAAGTTGATTTATAG
Upstream 100 bases:
>100_bases GATAAAAGGCTTATCAGTAATGGTCTATTGATAAAGTACAGACAATAAAAATTCAACATGTCAGAAATAGACTATAAAAT ATGCGATTGAGGTGAATGCC
Downstream 100 bases:
>100_bases GAGGAAACTAATGAAACAACTTACAGGCTATATTCAGCAATTTAATAATATAAAAATAATGGTTGTTGGTGAATTAATCG CTGATGAATTTATTACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRRLISKPEGHAGIFFIVVFVVMSLVSIRASAGPELDTVHYIVSGQGTTISSLKLDLGYKLDDINNLDLLGVYNGEDIKM QGTWNIRFLKRSLYSLQLGLSLTTGLNESGFGKAIGLSGEGIYLVQNRYFWNIDYFIDEKAWVYGAGLGLPVTPDTFLTL GVGNSYWDRNDINLNIGIKVDL
Sequences:
>Translated_182_residues MRRLISKPEGHAGIFFIVVFVVMSLVSIRASAGPELDTVHYIVSGQGTTISSLKLDLGYKLDDINNLDLLGVYNGEDIKM QGTWNIRFLKRSLYSLQLGLSLTTGLNESGFGKAIGLSGEGIYLVQNRYFWNIDYFIDEKAWVYGAGLGLPVTPDTFLTL GVGNSYWDRNDINLNIGIKVDL >Mature_182_residues MRRLISKPEGHAGIFFIVVFVVMSLVSIRASAGPELDTVHYIVSGQGTTISSLKLDLGYKLDDINNLDLLGVYNGEDIKM QGTWNIRFLKRSLYSLQLGLSLTTGLNESGFGKAIGLSGEGIYLVQNRYFWNIDYFIDEKAWVYGAGLGLPVTPDTFLTL GVGNSYWDRNDINLNIGIKVDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20159; Mature: 20159
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLISKPEGHAGIFFIVVFVVMSLVSIRASAGPELDTVHYIVSGQGTTISSLKLDLGYK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCEE LDDINNLDLLGVYNGEDIKMQGTWNIRFLKRSLYSLQLGLSLTTGLNESGFGKAIGLSGE ECCCCCEEEEEEECCCEEEEEEEEEEEEEHHHHEEEEECEEEECCCCCCCCCEEEEECCC GIYLVQNRYFWNIDYFIDEKAWVYGAGLGLPVTPDTFLTLGVGNSYWDRNDINLNIGIKV CEEEEECCEEEEEEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEE DL EC >Mature Secondary Structure MRRLISKPEGHAGIFFIVVFVVMSLVSIRASAGPELDTVHYIVSGQGTTISSLKLDLGYK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCEE LDDINNLDLLGVYNGEDIKMQGTWNIRFLKRSLYSLQLGLSLTTGLNESGFGKAIGLSGE ECCCCCEEEEEEECCCEEEEEEEEEEEEEHHHHEEEEECEEEECCCCCCCCCEEEEECCC GIYLVQNRYFWNIDYFIDEKAWVYGAGLGLPVTPDTFLTLGVGNSYWDRNDINLNIGIKV CEEEEECCEEEEEEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEE DL EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA