| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932489
Identifier: 220932489
GI number: 220932489
Start: 1776157
End: 1778658
Strand: Reverse
Name: 220932489
Synonym: Hore_16520
Alternate gene names: NA
Gene position: 1778658-1776157 (Counterclockwise)
Preceding gene: 220932490
Following gene: 220932488
Centisome position: 68.99
GC content: 42.05
Gene sequence:
>2502_bases GTGAAAAAAACAGCTATACTACATGAGACTATCTGGCCCGGACACTTTCTTTTAATTTTTTTAGTAATCCTGGCCGGCCT TTTTTTTATAAATATTGATGTATTTGCCTTATCCCAGGAGATGACCCAGTTTATCGAAGATGGTAAAACTATTAATGTAA AAATAGAAGAAAATATTACCAGATTAACCCTGACCCCCCAATCTGATATTGAGGTATATGATTATACAACAAAAAAGAAC TACAGGCTTAAAAGGGGTGAGGTCTACACTCTCAGAGTTACGGGTGTGGGTCCGACCCGTAGCCTGGGATATAGAGTCCA GGTGTTTGCCAGTTTTGATAAAAATAAGTCTTTGAATGTAAAAAATCAATTGCAGGAAGCGGGATATCAAAAAGTCTTTA TTGTCCGGGATGGGAAATGGTATAAAGTCCAGATAGGTGATTATAGTTCAAGGGAGAAGGCAGGAGAAGTTGCCAGTAAA CTGAATGGAGAGGGCTGGGAAACCTGGGTGGTTTCCGGTCCTTTTACACCACGGAGTGGTAACTGGATAGAGATCTTTTA TAAAAAAGAGGTTATTTTCAGGGGTAAGGTCCTGGAACTAGGGGGAGAGGTAAAGATTGAGAATTATGGACTTTTTCCGG GAAAGACAGAAATTGTTATGTCCGGACATTCTCTTACAGTCTATAACCTGGTTCCGTTAAGGGACCTCCTTTATGGCCTA GTGGCCGGTGAATTGTCTATTAAAGACAGAAAACATCTGGAAGCGGCTAAAGCCCAGGCTGTGGCTTCCCGGAGTTTTAT CCTCCATGAGCTTTTTTATGGTAATGAAGAGGTTTTTACATTTAATAATTACCGGGGGCTTGAGGGGGTTAATTATCTGG CAAAGATGGCCGTAAACCTCACTTCAGGAGAAGTCCTGGTCTATGATGGGAGGATAATTAAAGCTGTTTACCATGAAGAT AGTGGTGGTTTGACCGCTGACAGTAAAGATGTCCTGGCAGAAGAGATTCCCTATTTAAAACCGGTTACTGACGGGTTAAA AAGCAAAATCTGGAATAAGGTTTTTTCCGGGCATGAACTCGAAAAAAGACTTACCGGGTTGTTAAAGGATAAACTGGATC TGGAGATATTATGCCCGGGGATAAGGGATATAAAGACTGTAACCGATGAAAATGGCCGGGTTATCAGGGTGGATTTTGTT ACAGATTTTGGAATATATTCTGTTTATAAAGATAATATCAGATCGTTTTTTTCTACTACTGAGGGCCTGTTGCCGAGTAC CATATTTGAACTGGATAAAGGTTTTAAAAACGGGTATCTTCATCAGCTGACAATTAAAGGAGTCGGTCAGGGACATGGTC TTGGGATGTCTCAACTGGGAGCCTTAAAGCTGTCTGAAAAGGGCTATGACTACAGGGATATATTAAAGCATTATTATAAA AATGTAGAAGTAATTGACCTGACCGGTGAGATAAAAGAAAAGGTCAGGGTTGAAGCCCGGGTTATAAGAGGTCTTAGATA TTATGAAATTGAACAGCTTACCTGGTGGGGGCCCCGGTTAATAACAATGCTTGACCTTGATTTGAATAATGACTTTTTAT ATGTGGAGCCATTTCTGGCCAGTGGAAAGTTGTCTGGTCTATCTGATTTGAGTCAGGTAGTGTCCGGGAAAAAAGCCCTG GCCGGAATTAACGGGGGATTTTACAGTTATACAGGCCGTCCCCTGGGTTTATTTATGATTAATGGCGAGATTGTTAGTGA GGATATTATGGGGAGAACAGCTCTGGTAATAACTCCTGATGATATAATCATTGACAGGATAGACTGGACAGCCCGCTTAA CCAATACCAGGGGTGAAGAAATACTTATTGAAGGTGCTAACAGGCGTCCCCGGACCGATGAAGCGGTTATTATAAACAAA TATTATGGCCAGGTAGCTCCTCCGGCCCGGGAATGGATAACAGAGTTGGTAGTTTCCAATGGAGTAGTCCAGTCGATAAA AGACGGTAGCCCCGGGACAGTAATTCCAGATAATGGGTTTATTATCCAGGCCCATGGGCAGTCCCGACAGTTTCTGAAAT TATTTAAAGAGGGAGATAAAGTTGTATTGCAGAATAATTTCGGCCCGGGCCTCACAAATAAAGATATAAAGATGGCCCTC GGAGCTGGACCTACTTTGATAAAAAATGGTAAAATATATATTACAGGAAAGGCCGAAGGGTTTCAGCCAGATATTCTCAG GGGTAGGGCCCCCCGGACTGCTCTGGGGATTACTTCCGGAAACCATCTAATAATGGTTACTGTTGATGGAAGACAGCCCG GATTCAGTATCGGGATGACTCTGGAAGAACTGGCCCAGTTTATGTTAAAATATAATGTAGTACAGGCCATGAATCTCGAT GGTGGGGCTTCTTCCCGGATGGTGGTCAGAGGTTATACAATGAACAACCCCAGTGATAAAAGGCTTATCAGTAATGGTCT ATTGATAAAGTACAGACAATAA
Upstream 100 bases:
>100_bases AGAGTGTCAGACAGGGCTTTAATTACTTAAGCCGCCTGCTTTATGAACAGCTTAGCCGTCAACAGAGGTAAGTTAATGTG GAGAATAAAGGGGGGGTAAT
Downstream 100 bases:
>100_bases AAATTCAACATGTCAGAAATAGACTATAAAATATGCGATTGAGGTGAATGCCATGAGAAGGTTAATATCAAAGCCAGAGG GACATGCTGGAATCTTTTTT
Product: SpoIID/LytB domain-containing protein
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 833; Mature: 833
Protein sequence:
>833_residues MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENITRLTLTPQSDIEVYDYTTKKN YRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNVKNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASK LNGEGWETWVVSGPFTPRSGNWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNLTSGEVLVYDGRIIKAVYHED SGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHELEKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFV TDFGIYSVYKDNIRSFFSTTEGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLASGKLSGLSDLSQVVSGKKAL AGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPDDIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINK YYGQVAPPAREWITELVVSNGVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMTLEELAQFMLKYNVVQAMNLD GGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ
Sequences:
>Translated_833_residues MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENITRLTLTPQSDIEVYDYTTKKN YRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNVKNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASK LNGEGWETWVVSGPFTPRSGNWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNLTSGEVLVYDGRIIKAVYHED SGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHELEKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFV TDFGIYSVYKDNIRSFFSTTEGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLASGKLSGLSDLSQVVSGKKAL AGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPDDIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINK YYGQVAPPAREWITELVVSNGVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMTLEELAQFMLKYNVVQAMNLD GGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ >Mature_833_residues MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENITRLTLTPQSDIEVYDYTTKKN YRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNVKNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASK LNGEGWETWVVSGPFTPRSGNWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNLTSGEVLVYDGRIIKAVYHED SGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHELEKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFV TDFGIYSVYKDNIRSFFSTTEGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLASGKLSGLSDLSQVVSGKKAL AGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPDDIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINK YYGQVAPPAREWITELVVSNGVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMTLEELAQFMLKYNVVQAMNLD GGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 93319; Mature: 93319
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENIT CCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEHHEEHHHHHHHHHHCCCEEEEEEECCEE RLTLTPQSDIEVYDYTTKKNYRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNV EEEECCCCCCEEEEEECCCCEEEECCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCH KNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASKLNGEGWETWVVSGPFTPRSG HHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC NWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL CEEEEEEEEEEEEECEEEECCCEEEEEEECCCCCCEEEEEECCEEEEEEECCHHHHHHHH VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNL HHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHEEEE TSGEVLVYDGRIIKAVYHEDSGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHEL CCCCEEEECCEEEEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH EKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFVTDFGIYSVYKDNIRSFFSTT HHHHHHHHHCCCCEEEECCCCHHHHEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH EGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK CCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCEEEECCCCCCHHHHHHHHHC NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLA CCEEEEECHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEC SGKLSGLSDLSQVVSGKKALAGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPD CCCCCCHHHHHHHHCCCHHEEECCCCEEEECCCEEEEEEECCEEECHHHCCCEEEEECCC DIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINKYYGQVAPPAREWITELVVSN CEEEECCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCC GVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL CHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEE GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMT CCCCEEEECCEEEEEECCCCCCCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCC LEELAQFMLKYNVVQAMNLDGGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ HHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCHHHHHCCCEEEEEEC >Mature Secondary Structure MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENIT CCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEHHEEHHHHHHHHHHCCCEEEEEEECCEE RLTLTPQSDIEVYDYTTKKNYRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNV EEEECCCCCCEEEEEECCCCEEEECCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCH KNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASKLNGEGWETWVVSGPFTPRSG HHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC NWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL CEEEEEEEEEEEEECEEEECCCEEEEEEECCCCCCEEEEEECCEEEEEEECCHHHHHHHH VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNL HHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHEEEE TSGEVLVYDGRIIKAVYHEDSGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHEL CCCCEEEECCEEEEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH EKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFVTDFGIYSVYKDNIRSFFSTT HHHHHHHHHCCCCEEEECCCCHHHHEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH EGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK CCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCEEEECCCCCCHHHHHHHHHC NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLA CCEEEEECHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEC SGKLSGLSDLSQVVSGKKALAGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPD CCCCCCHHHHHHHHCCCHHEEECCCCEEEECCCEEEEEEECCEEECHHHCCCEEEEECCC DIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINKYYGQVAPPAREWITELVVSN CEEEECCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCC GVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL CHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEE GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMT CCCCEEEECCEEEEEECCCCCCCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCC LEELAQFMLKYNVVQAMNLDGGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ HHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA