Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932489

Identifier: 220932489

GI number: 220932489

Start: 1776157

End: 1778658

Strand: Reverse

Name: 220932489

Synonym: Hore_16520

Alternate gene names: NA

Gene position: 1778658-1776157 (Counterclockwise)

Preceding gene: 220932490

Following gene: 220932488

Centisome position: 68.99

GC content: 42.05

Gene sequence:

>2502_bases
GTGAAAAAAACAGCTATACTACATGAGACTATCTGGCCCGGACACTTTCTTTTAATTTTTTTAGTAATCCTGGCCGGCCT
TTTTTTTATAAATATTGATGTATTTGCCTTATCCCAGGAGATGACCCAGTTTATCGAAGATGGTAAAACTATTAATGTAA
AAATAGAAGAAAATATTACCAGATTAACCCTGACCCCCCAATCTGATATTGAGGTATATGATTATACAACAAAAAAGAAC
TACAGGCTTAAAAGGGGTGAGGTCTACACTCTCAGAGTTACGGGTGTGGGTCCGACCCGTAGCCTGGGATATAGAGTCCA
GGTGTTTGCCAGTTTTGATAAAAATAAGTCTTTGAATGTAAAAAATCAATTGCAGGAAGCGGGATATCAAAAAGTCTTTA
TTGTCCGGGATGGGAAATGGTATAAAGTCCAGATAGGTGATTATAGTTCAAGGGAGAAGGCAGGAGAAGTTGCCAGTAAA
CTGAATGGAGAGGGCTGGGAAACCTGGGTGGTTTCCGGTCCTTTTACACCACGGAGTGGTAACTGGATAGAGATCTTTTA
TAAAAAAGAGGTTATTTTCAGGGGTAAGGTCCTGGAACTAGGGGGAGAGGTAAAGATTGAGAATTATGGACTTTTTCCGG
GAAAGACAGAAATTGTTATGTCCGGACATTCTCTTACAGTCTATAACCTGGTTCCGTTAAGGGACCTCCTTTATGGCCTA
GTGGCCGGTGAATTGTCTATTAAAGACAGAAAACATCTGGAAGCGGCTAAAGCCCAGGCTGTGGCTTCCCGGAGTTTTAT
CCTCCATGAGCTTTTTTATGGTAATGAAGAGGTTTTTACATTTAATAATTACCGGGGGCTTGAGGGGGTTAATTATCTGG
CAAAGATGGCCGTAAACCTCACTTCAGGAGAAGTCCTGGTCTATGATGGGAGGATAATTAAAGCTGTTTACCATGAAGAT
AGTGGTGGTTTGACCGCTGACAGTAAAGATGTCCTGGCAGAAGAGATTCCCTATTTAAAACCGGTTACTGACGGGTTAAA
AAGCAAAATCTGGAATAAGGTTTTTTCCGGGCATGAACTCGAAAAAAGACTTACCGGGTTGTTAAAGGATAAACTGGATC
TGGAGATATTATGCCCGGGGATAAGGGATATAAAGACTGTAACCGATGAAAATGGCCGGGTTATCAGGGTGGATTTTGTT
ACAGATTTTGGAATATATTCTGTTTATAAAGATAATATCAGATCGTTTTTTTCTACTACTGAGGGCCTGTTGCCGAGTAC
CATATTTGAACTGGATAAAGGTTTTAAAAACGGGTATCTTCATCAGCTGACAATTAAAGGAGTCGGTCAGGGACATGGTC
TTGGGATGTCTCAACTGGGAGCCTTAAAGCTGTCTGAAAAGGGCTATGACTACAGGGATATATTAAAGCATTATTATAAA
AATGTAGAAGTAATTGACCTGACCGGTGAGATAAAAGAAAAGGTCAGGGTTGAAGCCCGGGTTATAAGAGGTCTTAGATA
TTATGAAATTGAACAGCTTACCTGGTGGGGGCCCCGGTTAATAACAATGCTTGACCTTGATTTGAATAATGACTTTTTAT
ATGTGGAGCCATTTCTGGCCAGTGGAAAGTTGTCTGGTCTATCTGATTTGAGTCAGGTAGTGTCCGGGAAAAAAGCCCTG
GCCGGAATTAACGGGGGATTTTACAGTTATACAGGCCGTCCCCTGGGTTTATTTATGATTAATGGCGAGATTGTTAGTGA
GGATATTATGGGGAGAACAGCTCTGGTAATAACTCCTGATGATATAATCATTGACAGGATAGACTGGACAGCCCGCTTAA
CCAATACCAGGGGTGAAGAAATACTTATTGAAGGTGCTAACAGGCGTCCCCGGACCGATGAAGCGGTTATTATAAACAAA
TATTATGGCCAGGTAGCTCCTCCGGCCCGGGAATGGATAACAGAGTTGGTAGTTTCCAATGGAGTAGTCCAGTCGATAAA
AGACGGTAGCCCCGGGACAGTAATTCCAGATAATGGGTTTATTATCCAGGCCCATGGGCAGTCCCGACAGTTTCTGAAAT
TATTTAAAGAGGGAGATAAAGTTGTATTGCAGAATAATTTCGGCCCGGGCCTCACAAATAAAGATATAAAGATGGCCCTC
GGAGCTGGACCTACTTTGATAAAAAATGGTAAAATATATATTACAGGAAAGGCCGAAGGGTTTCAGCCAGATATTCTCAG
GGGTAGGGCCCCCCGGACTGCTCTGGGGATTACTTCCGGAAACCATCTAATAATGGTTACTGTTGATGGAAGACAGCCCG
GATTCAGTATCGGGATGACTCTGGAAGAACTGGCCCAGTTTATGTTAAAATATAATGTAGTACAGGCCATGAATCTCGAT
GGTGGGGCTTCTTCCCGGATGGTGGTCAGAGGTTATACAATGAACAACCCCAGTGATAAAAGGCTTATCAGTAATGGTCT
ATTGATAAAGTACAGACAATAA

Upstream 100 bases:

>100_bases
AGAGTGTCAGACAGGGCTTTAATTACTTAAGCCGCCTGCTTTATGAACAGCTTAGCCGTCAACAGAGGTAAGTTAATGTG
GAGAATAAAGGGGGGGTAAT

Downstream 100 bases:

>100_bases
AAATTCAACATGTCAGAAATAGACTATAAAATATGCGATTGAGGTGAATGCCATGAGAAGGTTAATATCAAAGCCAGAGG
GACATGCTGGAATCTTTTTT

Product: SpoIID/LytB domain-containing protein

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 833; Mature: 833

Protein sequence:

>833_residues
MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENITRLTLTPQSDIEVYDYTTKKN
YRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNVKNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASK
LNGEGWETWVVSGPFTPRSGNWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL
VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNLTSGEVLVYDGRIIKAVYHED
SGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHELEKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFV
TDFGIYSVYKDNIRSFFSTTEGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK
NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLASGKLSGLSDLSQVVSGKKAL
AGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPDDIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINK
YYGQVAPPAREWITELVVSNGVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL
GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMTLEELAQFMLKYNVVQAMNLD
GGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ

Sequences:

>Translated_833_residues
MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENITRLTLTPQSDIEVYDYTTKKN
YRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNVKNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASK
LNGEGWETWVVSGPFTPRSGNWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL
VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNLTSGEVLVYDGRIIKAVYHED
SGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHELEKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFV
TDFGIYSVYKDNIRSFFSTTEGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK
NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLASGKLSGLSDLSQVVSGKKAL
AGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPDDIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINK
YYGQVAPPAREWITELVVSNGVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL
GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMTLEELAQFMLKYNVVQAMNLD
GGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ
>Mature_833_residues
MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENITRLTLTPQSDIEVYDYTTKKN
YRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNVKNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASK
LNGEGWETWVVSGPFTPRSGNWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL
VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNLTSGEVLVYDGRIIKAVYHED
SGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHELEKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFV
TDFGIYSVYKDNIRSFFSTTEGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK
NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLASGKLSGLSDLSQVVSGKKAL
AGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPDDIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINK
YYGQVAPPAREWITELVVSNGVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL
GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMTLEELAQFMLKYNVVQAMNLD
GGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 93319; Mature: 93319

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENIT
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEHHEEHHHHHHHHHHCCCEEEEEEECCEE
RLTLTPQSDIEVYDYTTKKNYRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNV
EEEECCCCCCEEEEEECCCCEEEECCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCH
KNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASKLNGEGWETWVVSGPFTPRSG
HHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
NWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL
CEEEEEEEEEEEEECEEEECCCEEEEEEECCCCCCEEEEEECCEEEEEEECCHHHHHHHH
VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNL
HHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHEEEE
TSGEVLVYDGRIIKAVYHEDSGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHEL
CCCCEEEECCEEEEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH
EKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFVTDFGIYSVYKDNIRSFFSTT
HHHHHHHHHCCCCEEEECCCCHHHHEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH
EGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK
CCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCEEEECCCCCCHHHHHHHHHC
NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLA
CCEEEEECHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEC
SGKLSGLSDLSQVVSGKKALAGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPD
CCCCCCHHHHHHHHCCCHHEEECCCCEEEECCCEEEEEEECCEEECHHHCCCEEEEECCC
DIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINKYYGQVAPPAREWITELVVSN
CEEEECCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCC
GVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL
CHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEE
GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMT
CCCCEEEECCEEEEEECCCCCCCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCC
LEELAQFMLKYNVVQAMNLDGGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ
HHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCHHHHHCCCEEEEEEC
>Mature Secondary Structure
MKKTAILHETIWPGHFLLIFLVILAGLFFINIDVFALSQEMTQFIEDGKTINVKIEENIT
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEHHEEHHHHHHHHHHCCCEEEEEEECCEE
RLTLTPQSDIEVYDYTTKKNYRLKRGEVYTLRVTGVGPTRSLGYRVQVFASFDKNKSLNV
EEEECCCCCCEEEEEECCCCEEEECCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCH
KNQLQEAGYQKVFIVRDGKWYKVQIGDYSSREKAGEVASKLNGEGWETWVVSGPFTPRSG
HHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
NWIEIFYKKEVIFRGKVLELGGEVKIENYGLFPGKTEIVMSGHSLTVYNLVPLRDLLYGL
CEEEEEEEEEEEEECEEEECCCEEEEEEECCCCCCEEEEEECCEEEEEEECCHHHHHHHH
VAGELSIKDRKHLEAAKAQAVASRSFILHELFYGNEEVFTFNNYRGLEGVNYLAKMAVNL
HHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHEEEE
TSGEVLVYDGRIIKAVYHEDSGGLTADSKDVLAEEIPYLKPVTDGLKSKIWNKVFSGHEL
CCCCEEEECCEEEEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH
EKRLTGLLKDKLDLEILCPGIRDIKTVTDENGRVIRVDFVTDFGIYSVYKDNIRSFFSTT
HHHHHHHHHCCCCEEEECCCCHHHHEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH
EGLLPSTIFELDKGFKNGYLHQLTIKGVGQGHGLGMSQLGALKLSEKGYDYRDILKHYYK
CCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCEEEECCCCCCHHHHHHHHHC
NVEVIDLTGEIKEKVRVEARVIRGLRYYEIEQLTWWGPRLITMLDLDLNNDFLYVEPFLA
CCEEEEECHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEC
SGKLSGLSDLSQVVSGKKALAGINGGFYSYTGRPLGLFMINGEIVSEDIMGRTALVITPD
CCCCCCHHHHHHHHCCCHHEEECCCCEEEECCCEEEEEEECCEEECHHHCCCEEEEECCC
DIIIDRIDWTARLTNTRGEEILIEGANRRPRTDEAVIINKYYGQVAPPAREWITELVVSN
CEEEECCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCC
GVVQSIKDGSPGTVIPDNGFIIQAHGQSRQFLKLFKEGDKVVLQNNFGPGLTNKDIKMAL
CHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEE
GAGPTLIKNGKIYITGKAEGFQPDILRGRAPRTALGITSGNHLIMVTVDGRQPGFSIGMT
CCCCEEEECCEEEEEECCCCCCCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCC
LEELAQFMLKYNVVQAMNLDGGASSRMVVRGYTMNNPSDKRLISNGLLIKYRQ
HHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA