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The map label for this gene is yhbH [C]

Identifier: 220932482

GI number: 220932482

Start: 1771183

End: 1771737

Strand: Reverse

Name: yhbH [C]

Synonym: Hore_16460

Alternate gene names: 220932482

Gene position: 1771737-1771183 (Counterclockwise)

Preceding gene: 220932483

Following gene: 220932481

Centisome position: 68.72

GC content: 35.68

Gene sequence:

>555_bases
TTGAAGATTACCACATATGGAAAGAATATTGATGTTACCCCTGCTTTAAAAGAATATGCTATAGAAAAGGTAAGTAAATT
AGGAAAGTACTTTGATGGTGAGCCCCAGGAAGCCCATATTTCTATGGAAGTAGAAAAGGGCAGGCACATTGTCGAAGTAA
CTGCCTACCTCAACGGTCTTATTTTAAGGGGGGAAGAAGAATCTCAGGACATGTATGCCTCTATTGACGGAGTACTGGAA
AAACTGGAACGTCAGGTTCATAAATATAAAACCAAAATTAATAGAAAAATAAGGGAGAGGAAACAGGAATTTAAAAAAGA
ATATAAAGAAGAGAGAAGAGAAGAGATTTTAAATAGTGAGGAGGATGAATTTAAACCCAGAATTGTCAGGACCAAAAAAT
TTGCTATAAAACCAATGTCTGTAGAAGAAGCCGCCATGCAAATGGATTTGCTTGGCCATGATTTCTTTGTCTTTACAAAT
GCCAATACGGAACAGGTTAATGTGGTCTATAAAAGAAAAGATGGTAATTATGGATTGATTGAGCCTACATTTTAA

Upstream 100 bases:

>100_bases
AATTTAAAAAATATTAATAAAATAAATTATCTGGTTGGCAGGAATTATTTTCTTTTTGTCGAATATTATTAATAAAAGGG
AACGAAAGGAGTGGGCAGTA

Downstream 100 bases:

>100_bases
AATACTGGATATAATTAAACCAGCATAATGGAATATCTTAAGTGCCAACAATTTAATACAAATAGTGACAGATAATTGTT
ATTTATCGAATTTTAGCCAC

Product: sigma 54 modulation protein/30S ribosomal protein S30EA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKITTYGKNIDVTPALKEYAIEKVSKLGKYFDGEPQEAHISMEVEKGRHIVEVTAYLNGLILRGEEESQDMYASIDGVLE
KLERQVHKYKTKINRKIRERKQEFKKEYKEERREEILNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTN
ANTEQVNVVYKRKDGNYGLIEPTF

Sequences:

>Translated_184_residues
MKITTYGKNIDVTPALKEYAIEKVSKLGKYFDGEPQEAHISMEVEKGRHIVEVTAYLNGLILRGEEESQDMYASIDGVLE
KLERQVHKYKTKINRKIRERKQEFKKEYKEERREEILNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTN
ANTEQVNVVYKRKDGNYGLIEPTF
>Mature_184_residues
MKITTYGKNIDVTPALKEYAIEKVSKLGKYFDGEPQEAHISMEVEKGRHIVEVTAYLNGLILRGEEESQDMYASIDGVLE
KLERQVHKYKTKINRKIRERKQEFKKEYKEERREEILNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTN
ANTEQVNVVYKRKDGNYGLIEPTF

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=93, Percent_Identity=38.7096774193548, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21630; Mature: 21630

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITTYGKNIDVTPALKEYAIEKVSKLGKYFDGEPQEAHISMEVEKGRHIVEVTAYLNGL
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEHHHHHCCE
ILRGEEESQDMYASIDGVLEKLERQVHKYKTKINRKIRERKQEFKKEYKEERREEILNSE
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTNANTEQVNVVYKRKDGNYGLI
CCCCCCHHEEHHHHEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCCCC
EPTF
CCCC
>Mature Secondary Structure
MKITTYGKNIDVTPALKEYAIEKVSKLGKYFDGEPQEAHISMEVEKGRHIVEVTAYLNGL
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEHHHHHCCE
ILRGEEESQDMYASIDGVLEKLERQVHKYKTKINRKIRERKQEFKKEYKEERREEILNSE
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTNANTEQVNVVYKRKDGNYGLI
CCCCCCHHEEHHHHEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCCCC
EPTF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA