| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is tarA [H]
Identifier: 220932475
GI number: 220932475
Start: 1760749
End: 1761495
Strand: Reverse
Name: tarA [H]
Synonym: Hore_16390
Alternate gene names: 220932475
Gene position: 1761495-1760749 (Counterclockwise)
Preceding gene: 220932476
Following gene: 220932474
Centisome position: 68.32
GC content: 42.17
Gene sequence:
>747_bases ATGGTAACAGGAAATAGGGTAGATATTCTCGGGATAAAGGTTGATAATGTTTCTATGGGAGAAGCCATAAGTAAAGTTGT CAAGTATATTGAGGAAGGGGGCCGTTGCCGCTTAATTGTAACTCCCAATTCTGAGATTATTGTCAGGGCCCGGCGGGATT CAAACCTGGCCCATATTCTTAACATGGCTGATTTAACAATTCCCGATGGAGCCGGAGTGGTCCTGGCTTCCCGCCTGATA AAGCCGGCCTTAAAAGAAAGGGTTGCTGGCTTTGATCTTATGAAGGAATTACTTAAAGAGGCTGCGTCAAAAGGTTTAAA GGTCTTTTTCCTCGGTGGTAAACAGGAGGTTATTAAAAAGGCTGTTGCTAATATAGAAAAAAAATACCCCGGCCTTAAAA TAAGCGGGTATCATCATGGTTATCTTAATAAAGAGCTGGAGAATAAGGTTATAGGGGAGATTAATACCCTTAAGCCACAT CTCATTTTTGTCGGGATGGGTGTTCCCCGCCAGGAGGAATTCCTCTATAATAATTTAACAGAATTAAAGGCAGGGGTTGC CATGACAGTCGGAGGTTCTTTTGATATACTGGCCGGTAATTTGAAGAGGGCTCCCCGGTGGATGCAGAAAAATCATCTGG AGTGGTTGTATAGACTAAGGCAGGAACCAAAACGCATTATTAGAATGATGGCTCTTCCCCGGTTTGTATATCTGGTCTTT AAAAAGTATTTAAAAGACAGGTTATAA
Upstream 100 bases:
>100_bases GCATTTTCAAAACGACTTGATAACAGACTGAAAGAATACAGGGAAGTAGCCCTTCAGAATGCTGAGCTTGCCCTTAATTT AATAGAGGGTGGTTATAACC
Downstream 100 bases:
>100_bases AATAAATTAAAAAATGGTCTAAATAGTTATTTCTATTCAGTGATTAAAATAGCTTCTAATTTTTTCAGTCTAAATGTAAT TTAATGTAATAATGTTACTG
Product: glycosyl transferase, WecB/TagA/CpsF family
Products: NA
Alternate protein names: N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MVTGNRVDILGIKVDNVSMGEAISKVVKYIEEGGRCRLIVTPNSEIIVRARRDSNLAHILNMADLTIPDGAGVVLASRLI KPALKERVAGFDLMKELLKEAASKGLKVFFLGGKQEVIKKAVANIEKKYPGLKISGYHHGYLNKELENKVIGEINTLKPH LIFVGMGVPRQEEFLYNNLTELKAGVAMTVGGSFDILAGNLKRAPRWMQKNHLEWLYRLRQEPKRIIRMMALPRFVYLVF KKYLKDRL
Sequences:
>Translated_248_residues MVTGNRVDILGIKVDNVSMGEAISKVVKYIEEGGRCRLIVTPNSEIIVRARRDSNLAHILNMADLTIPDGAGVVLASRLI KPALKERVAGFDLMKELLKEAASKGLKVFFLGGKQEVIKKAVANIEKKYPGLKISGYHHGYLNKELENKVIGEINTLKPH LIFVGMGVPRQEEFLYNNLTELKAGVAMTVGGSFDILAGNLKRAPRWMQKNHLEWLYRLRQEPKRIIRMMALPRFVYLVF KKYLKDRL >Mature_248_residues MVTGNRVDILGIKVDNVSMGEAISKVVKYIEEGGRCRLIVTPNSEIIVRARRDSNLAHILNMADLTIPDGAGVVLASRLI KPALKERVAGFDLMKELLKEAASKGLKVFFLGGKQEVIKKAVANIEKKYPGLKISGYHHGYLNKELENKVIGEINTLKPH LIFVGMGVPRQEEFLYNNLTELKAGVAMTVGGSFDILAGNLKRAPRWMQKNHLEWLYRLRQEPKRIIRMMALPRFVYLVF KKYLKDRL
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=189, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 28025; Mature: 28025
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTGNRVDILGIKVDNVSMGEAISKVVKYIEEGGRCRLIVTPNSEIIVRARRDSNLAHIL CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCHHHHH NMADLTIPDGAGVVLASRLIKPALKERVAGFDLMKELLKEAASKGLKVFFLGGKQEVIKK HHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHH AVANIEKKYPGLKISGYHHGYLNKELENKVIGEINTLKPHLIFVGMGVPRQEEFLYNNLT HHHHHHHHCCCCEEECEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHH ELKAGVAMTVGGSFDILAGNLKRAPRWMQKNHLEWLYRLRQEPKRIIRMMALPRFVYLVF HHHCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKYLKDRL HHHHHHCC >Mature Secondary Structure MVTGNRVDILGIKVDNVSMGEAISKVVKYIEEGGRCRLIVTPNSEIIVRARRDSNLAHIL CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCHHHHH NMADLTIPDGAGVVLASRLIKPALKERVAGFDLMKELLKEAASKGLKVFFLGGKQEVIKK HHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHH AVANIEKKYPGLKISGYHHGYLNKELENKVIGEINTLKPHLIFVGMGVPRQEEFLYNNLT HHHHHHHHCCCCEEECEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHH ELKAGVAMTVGGSFDILAGNLKRAPRWMQKNHLEWLYRLRQEPKRIIRMMALPRFVYLVF HHHCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKYLKDRL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]