| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932476
Identifier: 220932476
GI number: 220932476
Start: 1761479
End: 1762600
Strand: Reverse
Name: 220932476
Synonym: Hore_16400
Alternate gene names: NA
Gene position: 1762600-1761479 (Counterclockwise)
Preceding gene: 220932477
Following gene: 220932475
Centisome position: 68.37
GC content: 41.35
Gene sequence:
>1122_bases ATGAGTAAAATTATAATATCAGGGTATTATGGTTTTGAAAATACAGGTGATGAAGCCATACTACTGGGGATAATCAGCAA TATAAGAGCAGTGAATAAACCGGTTGATATCTGTGTTCTGTCCCGGAGGCCGGAGATTACTGCTTCAAGGTATGGGGTCA GGGCTATAAATAGAAATAATTTCAGGGCCATAATCCAGGAGATTAAAAGGTGTGACCTCTTTCTTAGCGGTGGAGGAAGC CTGCTCCAGGATATTACCGGATGGAAAAGTATTCCCTATTATCTGGGACTCGTTTTAATAGCCCAGCTTATGGGTAAAAA GACCGCCTTTTATGCCCAGGGAATCGGTCCGGTCCGGGGAACCCTGGGTCGGTTATTAATAAAATTTGTTGGTAACAGAA CTGATTTAATAACAGTCCGGGACGAGGCTTCAAAAGAACTTCTTGTGGAACTGGGGGTGGACCAGCCTAAAATTAAAATA ACGGTTGACCCTGTTTTTGGTCTGGCAGGGAAGGCGGGTTATATAGGGAAAATCAACAAAAACAGTCAGCTGGATAATAT TATAAATAAGGATAAACCGGTTATCGGGGTTTCGGTCAGGCCCTGGGGAGATAGTGAATATATTAAAAACCTGGCTTCAG GACTTAATTATCTATCAGATTTAAGCGGAGGCCAGTTCCTGATAATACCCATGCATTATTATCAGGATAAAGAGATCAGT TATCAATTAAAAAAACTCCTGGATAGACCTGCAGTAGTTCTGGAGAAACAATATACCCCCGCCGGGATGTTATCACTTTT TTCATACCTGGACCTGCTGGTAGGTGTCAGACTCCATTCCCTGATTTTTGCTGCTTTAAACAGTATTCCCTTTCTGGGGA TAAGCTATGACCCCAAGGTTGATAACTTTATTAATATGGTGAGGGAAAACTATGTAATTGATATAGAAGACCCCGGGGTA GATTTACTGAAAGATACATTCAATAGATTATGGTCAGACCGGGAAGCATTTTCAAAACGACTTGATAACAGACTGAAAGA ATACAGGGAAGTAGCCCTTCAGAATGCTGAGCTTGCCCTTAATTTAATAGAGGGTGGTTATAACCATGGTAACAGGAAAT AG
Upstream 100 bases:
>100_bases GGTCTTAAAACAGGACTGAAAAAATTAATTTTTATGGTTAATTATTGTAAACAAGCTTTTTATTATGAAATTGTTAAATT TAAAAACAGGGGTAATCACA
Downstream 100 bases:
>100_bases GGTAGATATTCTCGGGATAAAGGTTGATAATGTTTCTATGGGAGAAGCCATAAGTAAAGTTGTCAAGTATATTGAGGAAG GGGGCCGTTGCCGCTTAATT
Product: polysaccharide pyruvyl transferase
Products: NA
Alternate protein names: Polysaccharide Pyruvyl Transferase CsaB; Pyruvyl-Transferase; CsaB Protein; Polysaccharide Pyruvyl Transferase Csab; Polysaccharide Pyruvyl Transferase Superfamily; Polysaccharide Pyruvyl Transferase Family; Polysaccharide Pyruvyl Transferase Superfamily Protein; Polysaccharide Pyruvyl Transferase Family Protein; Glycosyl Transferase WecB/TagA/CpsF Family; Polysaccharide Pyruvyl-Transferase; WecB/TagA/CpsF Family Glycosyl Transferase
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSKIIISGYYGFENTGDEAILLGIISNIRAVNKPVDICVLSRRPEITASRYGVRAINRNNFRAIIQEIKRCDLFLSGGGS LLQDITGWKSIPYYLGLVLIAQLMGKKTAFYAQGIGPVRGTLGRLLIKFVGNRTDLITVRDEASKELLVELGVDQPKIKI TVDPVFGLAGKAGYIGKINKNSQLDNIINKDKPVIGVSVRPWGDSEYIKNLASGLNYLSDLSGGQFLIIPMHYYQDKEIS YQLKKLLDRPAVVLEKQYTPAGMLSLFSYLDLLVGVRLHSLIFAALNSIPFLGISYDPKVDNFINMVRENYVIDIEDPGV DLLKDTFNRLWSDREAFSKRLDNRLKEYREVALQNAELALNLIEGGYNHGNRK
Sequences:
>Translated_373_residues MSKIIISGYYGFENTGDEAILLGIISNIRAVNKPVDICVLSRRPEITASRYGVRAINRNNFRAIIQEIKRCDLFLSGGGS LLQDITGWKSIPYYLGLVLIAQLMGKKTAFYAQGIGPVRGTLGRLLIKFVGNRTDLITVRDEASKELLVELGVDQPKIKI TVDPVFGLAGKAGYIGKINKNSQLDNIINKDKPVIGVSVRPWGDSEYIKNLASGLNYLSDLSGGQFLIIPMHYYQDKEIS YQLKKLLDRPAVVLEKQYTPAGMLSLFSYLDLLVGVRLHSLIFAALNSIPFLGISYDPKVDNFINMVRENYVIDIEDPGV DLLKDTFNRLWSDREAFSKRLDNRLKEYREVALQNAELALNLIEGGYNHGNRK >Mature_372_residues SKIIISGYYGFENTGDEAILLGIISNIRAVNKPVDICVLSRRPEITASRYGVRAINRNNFRAIIQEIKRCDLFLSGGGSL LQDITGWKSIPYYLGLVLIAQLMGKKTAFYAQGIGPVRGTLGRLLIKFVGNRTDLITVRDEASKELLVELGVDQPKIKIT VDPVFGLAGKAGYIGKINKNSQLDNIINKDKPVIGVSVRPWGDSEYIKNLASGLNYLSDLSGGQFLIIPMHYYQDKEISY QLKKLLDRPAVVLEKQYTPAGMLSLFSYLDLLVGVRLHSLIFAALNSIPFLGISYDPKVDNFINMVRENYVIDIEDPGVD LLKDTFNRLWSDREAFSKRLDNRLKEYREVALQNAELALNLIEGGYNHGNRK
Specific function: Unknown
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41780; Mature: 41649
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIISGYYGFENTGDEAILLGIISNIRAVNKPVDICVLSRRPEITASRYGVRAINRNN CCEEEEEEECCCCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCEEEECCCH FRAIIQEIKRCDLFLSGGGSLLQDITGWKSIPYYLGLVLIAQLMGKKTAFYAQGIGPVRG HHHHHHHHHHCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH TLGRLLIKFVGNRTDLITVRDEASKELLVELGVDQPKIKITVDPVFGLAGKAGYIGKINK HHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCHHCCCCCCCCEEECCC NSQLDNIINKDKPVIGVSVRPWGDSEYIKNLASGLNYLSDLSGGQFLIIPMHYYQDKEIS CCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCHHH YQLKKLLDRPAVVLEKQYTPAGMLSLFSYLDLLVGVRLHSLIFAALNSIPFLGISYDPKV HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCH DNFINMVRENYVIDIEDPGVDLLKDTFNRLWSDREAFSKRLDNRLKEYREVALQNAELAL HHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHEE NLIEGGYNHGNRK EHHHCCCCCCCCC >Mature Secondary Structure SKIIISGYYGFENTGDEAILLGIISNIRAVNKPVDICVLSRRPEITASRYGVRAINRNN CEEEEEEECCCCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCEEEECCCH FRAIIQEIKRCDLFLSGGGSLLQDITGWKSIPYYLGLVLIAQLMGKKTAFYAQGIGPVRG HHHHHHHHHHCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH TLGRLLIKFVGNRTDLITVRDEASKELLVELGVDQPKIKITVDPVFGLAGKAGYIGKINK HHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCHHCCCCCCCCEEECCC NSQLDNIINKDKPVIGVSVRPWGDSEYIKNLASGLNYLSDLSGGQFLIIPMHYYQDKEIS CCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCHHH YQLKKLLDRPAVVLEKQYTPAGMLSLFSYLDLLVGVRLHSLIFAALNSIPFLGISYDPKV HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCH DNFINMVRENYVIDIEDPGVDLLKDTFNRLWSDREAFSKRLDNRLKEYREVALQNAELAL HHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHEE NLIEGGYNHGNRK EHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA