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The map label for this gene is ctpA [H]

Identifier: 220932471

GI number: 220932471

Start: 1757029

End: 1758168

Strand: Reverse

Name: ctpA [H]

Synonym: Hore_16350

Alternate gene names: 220932471

Gene position: 1758168-1757029 (Counterclockwise)

Preceding gene: 220932472

Following gene: 220932470

Centisome position: 68.2

GC content: 39.56

Gene sequence:

>1140_bases
TTGAAAAAGTATCTTAATACAGTGTTGGTTCTGGTAATATTATTATTTACCATAAATTTTTCTGCTTTTGCTGAGGAGGA
ATATACATCCATAGATGCCTTTCAGGATGTTATTTATCTAATAAAAAATTATTATGTTGAAGATGTCAAGCTGGATAAGC
TGATGCGGGGTGCTATCAAGGGAATGGTGGATTCTCTGGATCCGTATTCCGGGTATTTGACCCCTGAGGAATATGAGGAC
ATGCAGTTTGAATTTGAAGGCCATTATGGTGGTATTGGTATAGTAATCAGCACCTATGATGACAAGTTAACTGTGGTTCA
GCCTTTCAAAAACACTCCTGGTGATAAAGCTGGCTTAAAATCAGGTGACATCATTGTTGCCATTGATGGAAAACCAACTA
AAGATATGCCCCAGGAGAAAGCTGTAAACCTTATGCGGGGCAAACCCGGTACCAGAGTTATCCTAACTATAAAACGGGAA
AATAAAAAAGAACTCTTTGATGTTGAAATTATCAGGGCTGATATAGAGATTCCATATGTAGAATGGGAAATGAAAGATGA
TAAGATTGGCTATATTGTGATTCATCAGTTTGTTGAGAATACAGGTCAGAAAGTTAGAAGGGGTTTACTGGAGCTGATGT
CAAAAGGGGCGAAAGGAGTAATCCTCGATTTACGTAATAATCCTGGAGGATTGTTAACAGAAGCTATAACAGTTACCAGT
AATTTTGTTGAAAATGGAGAAGTAGTCTCCATAAAGCAGAGAAACGGCCAGGAGAAGAGTTTTAAAGTCGAATCTAACAT
TTCCAGTATAGATTTACCCCTTGTGGTTCTGGTTAATGGATATAGTGCCAGTGCCTCTGAAATTGTGGCCGGTGCTATTC
AGGATCATAACCGGGGAACAGTAATGGGAACGACAACCTATGGCAAGGGAACGGTTCAAACGGTAATACCCCTTGATGAC
GGTTCGGCTCTCCGCCTGACTACAGCCAATTATTTTACACCTGAGGGAAGGTATATCCATGAAAAGGGGATTAAACCAGA
CATTACTGTCGAGTATGATTCTGAAAGTAAAGTTGATAACCAGCTGGAAAAGGCTATCAAATATATTAAATCCCTGGTGT
CGGAAAGGATGGCCAGTTAA

Upstream 100 bases:

>100_bases
TTTATAAATCCTTTTCTAAAGGCAGGAAAAAAGGGGGTGGGTCTTGAAAATAATTATGAAGGAGAAAATATAAATTACAT
AAGGAGTAGGTGAGGTAACA

Downstream 100 bases:

>100_bases
GGATAACTAATTAATTTATCAGGAGGGGAAATTATTGGGTGTATTTGATATAATGGGTCCTGTAATGATTGGCCCTTCAA
GTTCCCATACTGCAGGTGCT

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKKYLNTVLVLVILLFTINFSAFAEEEYTSIDAFQDVIYLIKNYYVEDVKLDKLMRGAIKGMVDSLDPYSGYLTPEEYED
MQFEFEGHYGGIGIVISTYDDKLTVVQPFKNTPGDKAGLKSGDIIVAIDGKPTKDMPQEKAVNLMRGKPGTRVILTIKRE
NKKELFDVEIIRADIEIPYVEWEMKDDKIGYIVIHQFVENTGQKVRRGLLELMSKGAKGVILDLRNNPGGLLTEAITVTS
NFVENGEVVSIKQRNGQEKSFKVESNISSIDLPLVVLVNGYSASASEIVAGAIQDHNRGTVMGTTTYGKGTVQTVIPLDD
GSALRLTTANYFTPEGRYIHEKGIKPDITVEYDSESKVDNQLEKAIKYIKSLVSERMAS

Sequences:

>Translated_379_residues
MKKYLNTVLVLVILLFTINFSAFAEEEYTSIDAFQDVIYLIKNYYVEDVKLDKLMRGAIKGMVDSLDPYSGYLTPEEYED
MQFEFEGHYGGIGIVISTYDDKLTVVQPFKNTPGDKAGLKSGDIIVAIDGKPTKDMPQEKAVNLMRGKPGTRVILTIKRE
NKKELFDVEIIRADIEIPYVEWEMKDDKIGYIVIHQFVENTGQKVRRGLLELMSKGAKGVILDLRNNPGGLLTEAITVTS
NFVENGEVVSIKQRNGQEKSFKVESNISSIDLPLVVLVNGYSASASEIVAGAIQDHNRGTVMGTTTYGKGTVQTVIPLDD
GSALRLTTANYFTPEGRYIHEKGIKPDITVEYDSESKVDNQLEKAIKYIKSLVSERMAS
>Mature_379_residues
MKKYLNTVLVLVILLFTINFSAFAEEEYTSIDAFQDVIYLIKNYYVEDVKLDKLMRGAIKGMVDSLDPYSGYLTPEEYED
MQFEFEGHYGGIGIVISTYDDKLTVVQPFKNTPGDKAGLKSGDIIVAIDGKPTKDMPQEKAVNLMRGKPGTRVILTIKRE
NKKELFDVEIIRADIEIPYVEWEMKDDKIGYIVIHQFVENTGQKVRRGLLELMSKGAKGVILDLRNNPGGLLTEAITVTS
NFVENGEVVSIKQRNGQEKSFKVESNISSIDLPLVVLVNGYSASASEIVAGAIQDHNRGTVMGTTTYGKGTVQTVIPLDD
GSALRLTTANYFTPEGRYIHEKGIKPDITVEYDSESKVDNQLEKAIKYIKSLVSERMAS

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=315, Percent_Identity=30.7936507936508, Blast_Score=119, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 42266; Mature: 42266

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYLNTVLVLVILLFTINFSAFAEEEYTSIDAFQDVIYLIKNYYVEDVKLDKLMRGAIK
CHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMVDSLDPYSGYLTPEEYEDMQFEFEGHYGGIGIVISTYDDKLTVVQPFKNTPGDKAGLK
HHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC
SGDIIVAIDGKPTKDMPQEKAVNLMRGKPGTRVILTIKRENKKELFDVEIIRADIEIPYV
CCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHEEEEEEEEEEECEEE
EWEMKDDKIGYIVIHQFVENTGQKVRRGLLELMSKGAKGVILDLRNNPGGLLTEAITVTS
EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHEEHHH
NFVENGEVVSIKQRNGQEKSFKVESNISSIDLPLVVLVNGYSASASEIVAGAIQDHNRGT
HHCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCE
VMGTTTYGKGTVQTVIPLDDGSALRLTTANYFTPEGRYIHEKGIKPDITVEYDSESKVDN
EEEEEECCCCEEEEEEEECCCCEEEEEECCEECCCCCEEECCCCCCCEEEEECCCCHHHH
QLEKAIKYIKSLVSERMAS
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKYLNTVLVLVILLFTINFSAFAEEEYTSIDAFQDVIYLIKNYYVEDVKLDKLMRGAIK
CHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMVDSLDPYSGYLTPEEYEDMQFEFEGHYGGIGIVISTYDDKLTVVQPFKNTPGDKAGLK
HHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC
SGDIIVAIDGKPTKDMPQEKAVNLMRGKPGTRVILTIKRENKKELFDVEIIRADIEIPYV
CCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHEEEEEEEEEEECEEE
EWEMKDDKIGYIVIHQFVENTGQKVRRGLLELMSKGAKGVILDLRNNPGGLLTEAITVTS
EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHEEHHH
NFVENGEVVSIKQRNGQEKSFKVESNISSIDLPLVVLVNGYSASASEIVAGAIQDHNRGT
HHCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCE
VMGTTTYGKGTVQTVIPLDDGSALRLTTANYFTPEGRYIHEKGIKPDITVEYDSESKVDN
EEEEEECCCCEEEEEEEECCCCEEEEEECCEECCCCCEEECCCCCCCEEEEECCCCHHHH
QLEKAIKYIKSLVSERMAS
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]