| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is spr [C]
Identifier: 220932461
GI number: 220932461
Start: 1746866
End: 1747288
Strand: Reverse
Name: spr [C]
Synonym: Hore_16250
Alternate gene names: 220932461
Gene position: 1747288-1746866 (Counterclockwise)
Preceding gene: 220932462
Following gene: 220932460
Centisome position: 67.77
GC content: 39.95
Gene sequence:
>423_bases TTGGATATAGAGATTAAAAAAATAGTTAACAGGTTAATTGGGATTCCATATAAGCATAACGGGAGATCCTATCAGGGGGT TGACTGCTGGGGCCTTGTCTATTTATTTTTTAAAGAACTCGGGGTAGATTTGCCTGTTGGTGACGGTGAGTTTGTGCCTG ATGACTGGTATAAACAGGAACCAGATCGTTACATCAGGGGAATAAGGACCCTGGGAGAGGAAGTAGGGCATTATAGATAC TTAAAACCCCTGGATATTCCCTATTTTAAACTATATAGAAATGTAATCACCCACTCCGGGGTAATGGTAGATGATGATAG CTTTATCCATGTTTTGATCAATAAAGAGGTAAGGCTTGATAGTATGAGCCGGAAGTACTGGAAGAGAAAATATGCAGGAG CTATCCGATTAACAGGTCTATAA
Upstream 100 bases:
>100_bases ATGTAGATGTTGCTAAGTTTAAGGGACTCATAAATTAAACCCCACTTTTGTCATTTGAGGTTGGTAATGAATATGCTAAA AGAAAAAAGGTGGGGTAAAG
Downstream 100 bases:
>100_bases TTATAGCAGTTGGCAACTCTATATAATAATGATAAAATATAAACTAAAGTAATAAGATGTAATTTAAAGTTAATGTATGC TATAAGTTAAAGAAGTCTTT
Product: NLP/P60 protein
Products: NA
Alternate protein names: Cell Wall Lytic Activity; Nlp/P60 Protein; NlpC/P60 Family; Endopeptidase Cell Wall Lytic Activity; Cell Wall-Associated Hydrolase
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MDIEIKKIVNRLIGIPYKHNGRSYQGVDCWGLVYLFFKELGVDLPVGDGEFVPDDWYKQEPDRYIRGIRTLGEEVGHYRY LKPLDIPYFKLYRNVITHSGVMVDDDSFIHVLINKEVRLDSMSRKYWKRKYAGAIRLTGL
Sequences:
>Translated_140_residues MDIEIKKIVNRLIGIPYKHNGRSYQGVDCWGLVYLFFKELGVDLPVGDGEFVPDDWYKQEPDRYIRGIRTLGEEVGHYRY LKPLDIPYFKLYRNVITHSGVMVDDDSFIHVLINKEVRLDSMSRKYWKRKYAGAIRLTGL >Mature_140_residues MDIEIKKIVNRLIGIPYKHNGRSYQGVDCWGLVYLFFKELGVDLPVGDGEFVPDDWYKQEPDRYIRGIRTLGEEVGHYRY LKPLDIPYFKLYRNVITHSGVMVDDDSFIHVLINKEVRLDSMSRKYWKRKYAGAIRLTGL
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16502; Mature: 16502
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIEIKKIVNRLIGIPYKHNGRSYQGVDCWGLVYLFFKELGVDLPVGDGEFVPDDWYKQE CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PDRYIRGIRTLGEEVGHYRYLKPLDIPYFKLYRNVITHSGVMVDDDSFIHVLINKEVRLD HHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHCCEEECCCCEEEEEECCCCCHH SMSRKYWKRKYAGAIRLTGL HHHHHHHHHHHCCEEEECCC >Mature Secondary Structure MDIEIKKIVNRLIGIPYKHNGRSYQGVDCWGLVYLFFKELGVDLPVGDGEFVPDDWYKQE CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PDRYIRGIRTLGEEVGHYRYLKPLDIPYFKLYRNVITHSGVMVDDDSFIHVLINKEVRLD HHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHCCEEECCCCEEEEEECCCCCHH SMSRKYWKRKYAGAIRLTGL HHHHHHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA