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The map label for this gene is cggR [H]

Identifier: 220932420

GI number: 220932420

Start: 1696800

End: 1697825

Strand: Reverse

Name: cggR [H]

Synonym: Hore_15840

Alternate gene names: 220932420

Gene position: 1697825-1696800 (Counterclockwise)

Preceding gene: 220932421

Following gene: 220932419

Centisome position: 65.85

GC content: 42.01

Gene sequence:

>1026_bases
ATGAACTACTTATTTAAGATACAGGAAAAAATTGTCCCTGAAATAATATCCCTTGCCGAAGAAAGGTATACTATACTCCG
TAGTATTTATTATAACCAGCCTATCGGGAGGAGATTGCTGGCAGAAAAAACCACTTTGAGTGAACGTACTATTAGAAATG
AGCTTAATTTTCTGGAAACCAAGGGGCTGGTGGAGGTTTCCCGGTCGGGAACGGTTATTACCAGGACCGGTCAGGAATTC
TTAAATGAACTGGATAAATATATAAAAGAACTAAAGGGATTGAAAAATTTAGAAGAAGAAGTAAAGAAAGTTCTGGGTTT
GAAACAGGTTTTACTGGTTCCTGGAGGTCTCGAATATTCAACGATTAAACAGGAAATAGGTCGTTTTACAGCAAAGTATC
TAAAGGGTCTCCTGAAAGATGATGATATTCTGGCAGTGACAGGGGGAACAACCCTGGCCCAGGTTGCTAATGCCATGAGG
TCAACCAGTAATCCGATGGAGGTTATGGTTGTTCCGGGAAGGGGAGGCCTCGGTGAAGAGGTTGAAATACAGGCCAATAC
TATTGCAGCCACGATTGCTAAGAAAATTGGAGGAAAATATCAGCTCCTCCACCTTCCCGATAATATAAAGGAAGAAAACG
CAAACCGGATTGTAGCGGAACCTTCGATCCAGAAGACCCTGAACCAGTTAAAGAAGACAAATATTCTTCTCCACGGTGTG
GGGACTGCTGAGGAAATGGCCCAGAGAAGAGGAATGTCACCTCAGCAGATTAAGGCCCTTATAGACAGGGGAGCTATTGG
AGAAGCTTTTGGCTATTATTTTAATGAACAGGGAGATATAGTGTACACTACCAGTAGTGTAGGGTTACATTTAAATGATT
TAACTAATATAGATACTGTTATTGCAGTAGCTGGAGGGCAGGAAAAAGCCCGGGCTATTAAGGCAGTTGTTTCACCTGAT
TACCAGGATATTTTAATTACCGATGAGTTAACAGCCAGGAGGATCCTGGAACTTAAAGGGAGGTGA

Upstream 100 bases:

>100_bases
CAAAAAGGTTAAAAGTAAAAATAAACGACTTTTTTTATGTTACTGTCGGGACGGAATTGTTCCAGTGGGACAAGAATGTA
CCCGTTATGGTGGTGAAATA

Downstream 100 bases:

>100_bases
TTGGTTCCAATTACATAATGGTAGTTAAAATATGGTAGTTAAAATAATTTATCCATGTATATAAAATTAGCTGACTCTAT
ATTAAATTTAACTTTTCTTT

Product: transcriptional regulator, DeoR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNYLFKIQEKIVPEIISLAEERYTILRSIYYNQPIGRRLLAEKTTLSERTIRNELNFLETKGLVEVSRSGTVITRTGQEF
LNELDKYIKELKGLKNLEEEVKKVLGLKQVLLVPGGLEYSTIKQEIGRFTAKYLKGLLKDDDILAVTGGTTLAQVANAMR
STSNPMEVMVVPGRGGLGEEVEIQANTIAATIAKKIGGKYQLLHLPDNIKEENANRIVAEPSIQKTLNQLKKTNILLHGV
GTAEEMAQRRGMSPQQIKALIDRGAIGEAFGYYFNEQGDIVYTTSSVGLHLNDLTNIDTVIAVAGGQEKARAIKAVVSPD
YQDILITDELTARRILELKGR

Sequences:

>Translated_341_residues
MNYLFKIQEKIVPEIISLAEERYTILRSIYYNQPIGRRLLAEKTTLSERTIRNELNFLETKGLVEVSRSGTVITRTGQEF
LNELDKYIKELKGLKNLEEEVKKVLGLKQVLLVPGGLEYSTIKQEIGRFTAKYLKGLLKDDDILAVTGGTTLAQVANAMR
STSNPMEVMVVPGRGGLGEEVEIQANTIAATIAKKIGGKYQLLHLPDNIKEENANRIVAEPSIQKTLNQLKKTNILLHGV
GTAEEMAQRRGMSPQQIKALIDRGAIGEAFGYYFNEQGDIVYTTSSVGLHLNDLTNIDTVIAVAGGQEKARAIKAVVSPD
YQDILITDELTARRILELKGR
>Mature_341_residues
MNYLFKIQEKIVPEIISLAEERYTILRSIYYNQPIGRRLLAEKTTLSERTIRNELNFLETKGLVEVSRSGTVITRTGQEF
LNELDKYIKELKGLKNLEEEVKKVLGLKQVLLVPGGLEYSTIKQEIGRFTAKYLKGLLKDDDILAVTGGTTLAQVANAMR
STSNPMEVMVVPGRGGLGEEVEIQANTIAATIAKKIGGKYQLLHLPDNIKEENANRIVAEPSIQKTLNQLKKTNILLHGV
GTAEEMAQRRGMSPQQIKALIDRGAIGEAFGYYFNEQGDIVYTTSSVGLHLNDLTNIDTVIAVAGGQEKARAIKAVVSPD
YQDILITDELTARRILELKGR

Specific function: Unknown

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=258, Percent_Identity=24.8062015503876, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87082414, Length=254, Percent_Identity=24.8031496062992, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 37841; Mature: 37841

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLFKIQEKIVPEIISLAEERYTILRSIYYNQPIGRRLLAEKTTLSERTIRNELNFLET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLVEVSRSGTVITRTGQEFLNELDKYIKELKGLKNLEEEVKKVLGLKQVLLVPGGLEYS
CCCEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHH
TIKQEIGRFTAKYLKGLLKDDDILAVTGGTTLAQVANAMRSTSNPMEVMVVPGRGGLGEE
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
VEIQANTIAATIAKKIGGKYQLLHLPDNIKEENANRIVAEPSIQKTLNQLKKTNILLHGV
EEEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCEEEEEC
GTAEEMAQRRGMSPQQIKALIDRGAIGEAFGYYFNEQGDIVYTTSSVGLHLNDLTNIDTV
CCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCEE
IAVAGGQEKARAIKAVVSPDYQDILITDELTARRILELKGR
EEECCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCC
>Mature Secondary Structure
MNYLFKIQEKIVPEIISLAEERYTILRSIYYNQPIGRRLLAEKTTLSERTIRNELNFLET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLVEVSRSGTVITRTGQEFLNELDKYIKELKGLKNLEEEVKKVLGLKQVLLVPGGLEYS
CCCEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHH
TIKQEIGRFTAKYLKGLLKDDDILAVTGGTTLAQVANAMRSTSNPMEVMVVPGRGGLGEE
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
VEIQANTIAATIAKKIGGKYQLLHLPDNIKEENANRIVAEPSIQKTLNQLKKTNILLHGV
EEEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCEEEEEC
GTAEEMAQRRGMSPQQIKALIDRGAIGEAFGYYFNEQGDIVYTTSSVGLHLNDLTNIDTV
CCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCEE
IAVAGGQEKARAIKAVVSPDYQDILITDELTARRILELKGR
EEECCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1452037 [H]