| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932371
Identifier: 220932371
GI number: 220932371
Start: 1641967
End: 1643763
Strand: Reverse
Name: 220932371
Synonym: Hore_15350
Alternate gene names: NA
Gene position: 1643763-1641967 (Counterclockwise)
Preceding gene: 220932372
Following gene: 220932370
Centisome position: 63.76
GC content: 43.35
Gene sequence:
>1797_bases GTGTTATATAAAATTATAGTCCGTCAAAACAATAAGGAGAGGGTATTGACCGGAAAACAGGGAGATAATCTACTAAAAAT ATTACAAAAAAATCATTATAAAACAAAGGCCCCCTGTGGCGGAGTCGGTACCTGTGGTAAGTGTAAAGTAAAGGTAAATT ATGGAGGAAGTCAGCCAACCCCCGGCGAAAGAGAGCTCCTGGATGAATCTGAGATTAAAGCAGGTATCAGGCTTGCGTGT CAGACAAGGATTAGCGGTCATATGGAGGTAGAGCTTGATACAGATGAAGAAATAGAGGGTCTGGTTGAAGGGATCAGGGT TGCTGTCGAACAGGACCCTTTTATACAAAAGGATATGGTCAGGCTTGAGGGACCATCTCTTGATGATCAGCGGGATTTAC TGACCCGGGTTTCAGGGGCTATTTCTTCTGATGGGATAAGCCTTAAAGCCCTGGATTACCTGGCTTCAATAGATATTGAC CGTGAATTATCTGTTATCAGGGCCGGTAACAGGGTTATTGATATAAATCAGGATAATGGTAAAGGTATTTATGGTATAGC GGTCGATATCGGAACCACCACCATTGCCATGTATCTAATAGACCTGATTACCGGAAAAGAGTCAGGGGTCCATTCCTTTA GCAATCCCCAGAAAAAATTCGGGGCTGATGTTATCTCCCGTATTAATTATACTTTACATAATGATAATGGTATCAAAGAC CTGCAACAGGAGTTGGTTGACGGGCTGAACAGGGGGATAAAGCATCTCACAGATGCTGTTAACCTCAAAAGGGACGAAAT ATATCATTTAACCATTGCCGGTAATACGACAATGCTTCACAGTTTACTGGGGGTTGATGCTTCTTCAATCGCCCGGGCCC CCTATATCCCGGTCTTTACTGACAGCCTTATGTTCAGAGCAGGCAAACTGGGTTTTAATATTAATGAAAACGGGGTTGTT CAACTCCTGCCGTCTATATCTGGCTATGTCGGGGGAGATATTGTCGGGGATTTACTGGTAACTGACTTTGAATCTCCTGA GTGGAATTTATTAATTGACATTGGAACCAATGGGGAGATAGTCCTGGGGAACAGGGATAAGCTTTTTGCCTGTTCAGCAG CGGCTGGTCCTGCCTTTGAAGGGGCCAGGATAACATTTGGTATGGCCGGGATTACCGGGGCTATATCTAAATACCGTTTT AATAATGGAGAGGTCCATTACCGGACAATAAATAATAACAGGGCCAGGGGTATCTGTGGTTCCGGGCTTGTTGATATCAT AGCCGAACTTTTAAAATATGGATTTTTAAAGGAGACAGGGGCTTTCAAGGATGGTGTTGAACTGAAGGCCGGTTATGCTG ATTATTTAACCACCTATAAGGGAATAACTTCATTTAGAGTTGTTCCCGGGAATGAAACCCATGATAATAAGGATATATTA TTAACCCAGAAGGATATCAGGGAGTTTCAGCTGGCTAAAGGTGCTATTCTGGCCGGGATAAAAATCCTCTTAAAGGAAGC CGGTGTTGACTACAGTGATATTGAAAAAGTTTATCTGGCCGGTGGTTTTGGAAATTATATTGACCCTCATAACGCTTCCC TTATCGGGCTTATTCCGGAGAATCTTGAGGATAAGGTAATCAGAATTGGAAATGGGGCCGGCATGGGGGCCAGGGCGGTT TTACTCGACCAGAAGCTGATTGAATATGCCGCCCGGCTCAAGGAAAAGACTACCTATATTGAGCTATCCAGTCATTCTGG TTTTCAGGAGGAATTTATGAATTCTATGGGTTTTTAA
Upstream 100 bases:
>100_bases AGGCATTTGAGGAGTCGGGCTTATCGGTCTGGCTCCTTTTTTAATATATTCCTTTAAATTACGGCAGAAGGTTAATTTGT TCTAGAGGGGGAGTGGCCAA
Downstream 100 bases:
>100_bases ACAAAAAAGGGTTTTCAAGTTGGTCTGGGAACTGTCCGGCCTTTTACAGATTGTTTTGATTTTTTGAAGGGGTGAAATCA TGACAGACAGGGCTGATAAT
Product: ferredoxin
Products: NA
Alternate protein names: Electron Transfer Protein; Corrinoid Activation/Regeneration Protein; Flavoprotein; Vitamin; Ferredoxin Domain-Containing Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; ATP Synthase F0 A Subunit; Methyltransferase Activation Protein MapA; Activating; Methylamine Methyltransferase Corrinoid Activation Protein
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPTPGERELLDESEIKAGIRLAC QTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMVRLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDID RELSVIRAGNRVIDINQDNGKGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFTDSLMFRAGKLGFNINENGVV QLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEIVLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRF NNGEVHYRTINNNRARGICGSGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPENLEDKVIRIGNGAGMGARAV LLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF
Sequences:
>Translated_598_residues MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPTPGERELLDESEIKAGIRLAC QTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMVRLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDID RELSVIRAGNRVIDINQDNGKGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFTDSLMFRAGKLGFNINENGVV QLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEIVLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRF NNGEVHYRTINNNRARGICGSGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPENLEDKVIRIGNGAGMGARAV LLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF >Mature_598_residues MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPTPGERELLDESEIKAGIRLAC QTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMVRLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDID RELSVIRAGNRVIDINQDNGKGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFTDSLMFRAGKLGFNINENGVV QLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEIVLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRF NNGEVHYRTINNNRARGICGSGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPENLEDKVIRIGNGAGMGARAV LLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF
Specific function: Unknown
COG id: COG3894
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65202; Mature: 65202
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPT CEEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCC PGERELLDESEIKAGIRLACQTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMV CCHHHHCCHHHHHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHEEECCCCCHHHHHH RLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDIDRELSVIRAGNRVIDINQDNG EECCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCEEECCCEEEEEECCCC KGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD CEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHH LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFT HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCHHHHCCCCCCCEEH DSLMFRAGKLGFNINENGVVQLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEI HHHHHHHCCCCCCCCCCCCEEEECHHCCCCCCHHHHHHHEECCCCCCEEEEEEECCCCEE VLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRFNNGEVHYRTINNNRARGICG EECCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCC SGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL CCHHHHHHHHHHHCCHHHCCCCCCCCEEECCHHHHHHHHCCCCEEEEECCCCCCCCCEEE LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPE EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCCEEEEECCC NLEDKVIRIGNGAGMGARAVLLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPT CEEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCC PGERELLDESEIKAGIRLACQTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMV CCHHHHCCHHHHHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHEEECCCCCHHHHHH RLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDIDRELSVIRAGNRVIDINQDNG EECCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCEEECCCEEEEEECCCC KGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD CEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHH LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFT HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCHHHHCCCCCCCEEH DSLMFRAGKLGFNINENGVVQLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEI HHHHHHHCCCCCCCCCCCCEEEECHHCCCCCCHHHHHHHEECCCCCCEEEEEEECCCCEE VLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRFNNGEVHYRTINNNRARGICG EECCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCC SGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL CCHHHHHHHHHHHCCHHHCCCCCCCCEEECCHHHHHHHHCCCCEEEEECCCCCCCCCEEE LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPE EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCCEEEEECCC NLEDKVIRIGNGAGMGARAVLLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA