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The map label for this gene is yobV [H]

Identifier: 220932362

GI number: 220932362

Start: 1632452

End: 1633435

Strand: Reverse

Name: yobV [H]

Synonym: Hore_15260

Alternate gene names: 220932362

Gene position: 1633435-1632452 (Counterclockwise)

Preceding gene: 220932364

Following gene: 220932361

Centisome position: 63.36

GC content: 35.67

Gene sequence:

>984_bases
ATGACAGTGAAAAGAAGTAAGTTGTACAGAATTTTAAAAATGATTAATTTATTAAGTAGTGGGGTTAAGAGATGGAGAGC
ACGGGATCTGGCGGAATTATTTGGTGTGTCACCGCGGACTATTTACCGGGATATACAGTATATGGAACAAATGCATATTC
CGGTAATTAAGGATGAGGAGAAGAATACCTATGCAATTATGGAGGATTTTTATTTTAAACCGCCGAGGATGACAAGAGAA
GAAGCCATGGCTCTACTGCTTGTAGCACATGCCTTCGAAGATGAGGTTTATCCCTACAGGGAAGAACTAAATAATGCTGT
ATCCAAAATAATTAATTCACTGCCATCTTCTGTAAAAAAGGTACTTTTAGACCTGGAGGATAGAATTTTATTTCACCAGG
GAGCTGTTGTAGATATGACGAAACACCGGGATACTATTAACATAATTAATGATTCCATTGCCAGTAACCAATCTGTTATT
ATAAATTATTATTCTCTCAGTAGTGATATGTTAAGGGAGCGTAAAGTTGACCCCTATAAAATTTTTGTACAGGATGGGGC
CTATTACTTAATAGCTTACTGCCATCTGCGCTGTAATGTATTATTATTCAGGGTAGATAGGATAAGGAATATTAAGGTAA
CCAGTGATAAATATATAATACCTGATGACTTTGATGTAGAAAAATATATGCAAAATGCCTGGGGTGTGGAACGGGGTGAT
AAAGAGGAAAGGGTTGTATTGTTATTTAAAGGAACTTCAGCAAAACTGGTAAAGGAAAGGAAATGGCAGGTTAAACACCA
GATAGTAGAACTAGGTGATGATAAAATTAGATTTGAGGTAACTACTGGTAGTATGCAGGAAATTATGGGCTGGATATTAC
AACACGGTTCAGAAGTTGAGGTAGTACGACCGGAGAGTTTAAAGGAAAATGTAATCAATGAAATTAAAAAAATGAGTAAT
ATATACAAAAAAACACATGTTTGA

Upstream 100 bases:

>100_bases
TGTAATTATATAGAAATTTATAAACAGGTATATTGTTATATTTAGTAATTTAGTAAGGGGTACTGTAAAATATTTTTTAT
TCAACCGGGTGGGTGTTGTC

Downstream 100 bases:

>100_bases
GACAGAAGTTGTCACAGGTGTGTGGTATGATATCTAATAGAGGATATTCAATAAATATTTCTGTAAGAAATGGTTAGTTT
TTGAATAACTATGTTAAATG

Product: Helix-turn-helix type 11 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTVKRSKLYRILKMINLLSSGVKRWRARDLAELFGVSPRTIYRDIQYMEQMHIPVIKDEEKNTYAIMEDFYFKPPRMTRE
EAMALLLVAHAFEDEVYPYREELNNAVSKIINSLPSSVKKVLLDLEDRILFHQGAVVDMTKHRDTINIINDSIASNQSVI
INYYSLSSDMLRERKVDPYKIFVQDGAYYLIAYCHLRCNVLLFRVDRIRNIKVTSDKYIIPDDFDVEKYMQNAWGVERGD
KEERVVLLFKGTSAKLVKERKWQVKHQIVELGDDKIRFEVTTGSMQEIMGWILQHGSEVEVVRPESLKENVINEIKKMSN
IYKKTHV

Sequences:

>Translated_327_residues
MTVKRSKLYRILKMINLLSSGVKRWRARDLAELFGVSPRTIYRDIQYMEQMHIPVIKDEEKNTYAIMEDFYFKPPRMTRE
EAMALLLVAHAFEDEVYPYREELNNAVSKIINSLPSSVKKVLLDLEDRILFHQGAVVDMTKHRDTINIINDSIASNQSVI
INYYSLSSDMLRERKVDPYKIFVQDGAYYLIAYCHLRCNVLLFRVDRIRNIKVTSDKYIIPDDFDVEKYMQNAWGVERGD
KEERVVLLFKGTSAKLVKERKWQVKHQIVELGDDKIRFEVTTGSMQEIMGWILQHGSEVEVVRPESLKENVINEIKKMSN
IYKKTHV
>Mature_326_residues
TVKRSKLYRILKMINLLSSGVKRWRARDLAELFGVSPRTIYRDIQYMEQMHIPVIKDEEKNTYAIMEDFYFKPPRMTREE
AMALLLVAHAFEDEVYPYREELNNAVSKIINSLPSSVKKVLLDLEDRILFHQGAVVDMTKHRDTINIINDSIASNQSVII
NYYSLSSDMLRERKVDPYKIFVQDGAYYLIAYCHLRCNVLLFRVDRIRNIKVTSDKYIIPDDFDVEKYMQNAWGVERGDK
EERVVLLFKGTSAKLVKERKWQVKHQIVELGDDKIRFEVTTGSMQEIMGWILQHGSEVEVVRPESLKENVINEIKKMSNI
YKKTHV

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 38464; Mature: 38333

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKRSKLYRILKMINLLSSGVKRWRARDLAELFGVSPRTIYRDIQYMEQMHIPVIKDEE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCC
KNTYAIMEDFYFKPPRMTREEAMALLLVAHAFEDEVYPYREELNNAVSKIINSLPSSVKK
CCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLLDLEDRILFHQGAVVDMTKHRDTINIINDSIASNQSVIINYYSLSSDMLRERKVDPYK
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCEE
IFVQDGAYYLIAYCHLRCNVLLFRVDRIRNIKVTSDKYIIPDDFDVEKYMQNAWGVERGD
EEEECCCEEEHHHHHHHHHHHEEEHHHHCEEEECCCCEECCCCCCHHHHHHHHCCCCCCC
KEERVVLLFKGTSAKLVKERKWQVKHQIVELGDDKIRFEVTTGSMQEIMGWILQHGSEVE
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCEE
VVRPESLKENVINEIKKMSNIYKKTHV
EECCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVKRSKLYRILKMINLLSSGVKRWRARDLAELFGVSPRTIYRDIQYMEQMHIPVIKDEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCC
KNTYAIMEDFYFKPPRMTREEAMALLLVAHAFEDEVYPYREELNNAVSKIINSLPSSVKK
CCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLLDLEDRILFHQGAVVDMTKHRDTINIINDSIASNQSVIINYYSLSSDMLRERKVDPYK
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCEE
IFVQDGAYYLIAYCHLRCNVLLFRVDRIRNIKVTSDKYIIPDDFDVEKYMQNAWGVERGD
EEEECCCEEEHHHHHHHHHHHEEEHHHHCEEEECCCCEECCCCCCHHHHHHHHCCCCCCC
KEERVVLLFKGTSAKLVKERKWQVKHQIVELGDDKIRFEVTTGSMQEIMGWILQHGSEVE
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCEE
VVRPESLKENVINEIKKMSNIYKKTHV
EECCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]