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The map label for this gene is ugpA [C]

Identifier: 220932340

GI number: 220932340

Start: 1605137

End: 1606006

Strand: Reverse

Name: ugpA [C]

Synonym: Hore_15030

Alternate gene names: 220932340

Gene position: 1606006-1605137 (Counterclockwise)

Preceding gene: 220932341

Following gene: 220932339

Centisome position: 62.29

GC content: 32.64

Gene sequence:

>870_bases
ATGCTCAAAAATGCCAAGCCTTTGGAAAAATGGTGGGTCTGGATACTACCTTTAATAGCAGTATTAACAGTATTTTTTCT
TTATCCATTACTAGATGTATTGAAGCTTAGCTTTACAAATGCAGAAATTGGTAGAAATGAATATATATATACAATCAACA
ATTATATTTCTATATTTTCAAATGGTGAACTATGGAGTGTTATTAAAGTAACTTTTATTTTTGTTGGGGCATCAGTTGTC
TTTCAATTATTATTGGGGTTAACCACTGCATTATTAATAAATAAAAATCTGCCTGGAGCTTCAATTGTAAAATTATCAAT
GATAAGTGCGTGGGTAGTCCCAGGAGTAGTAACAGGGATTATATGGCAGATAATTTACAGTAATAGTAGTTGGGGTATTC
TTAATTATTTTATAGAGTTGTTAGGTTTTGAAAAAATCCCTTTTTTATATGTTCCAAGCTGGGCCCTGTTCTCAGCTACA
TTAGCAAATATTTGGCGTGGAACAGGTTTTAGTGGAATAATGCAGTATGCTGCACTGAGAGGAATTCCTGATCAGTTGTA
TGAGGCAGCAGCTATAGATGGGGCTTCTAAATGGAAACAATTCTGGCATATTACTTTACCCCAGTTAAAACCCATGTTAA
TGACAAATCTTATCTTAATAACAATTTATACTTTTAATACTTATGATTCTGTGTATGCCTTAACAAAAGGAGGACCTGGA
AATAGTACTACGGTTATTTCTTTAAAAGCTTATAAACAGGTGTTTAGATATTTAGATCTAGGAAAAGGTTCAGCTTATGC
AGTAATAATGTTACTTTTGTCTGCTGTTTTTACTCTAATATACTCCAAAATGCTCTATGAGAAGGAGTGA

Upstream 100 bases:

>100_bases
GGGAGGTATAAAATGCCTCCTCAATTTATACAAACATTTAATGAAATTATACAAGTAATGAAATCATACAGCTTTTTTTA
ATGAAAGGAGTAGTCGTTAC

Downstream 100 bases:

>100_bases
TTAAAATGTGTAGATTTATAAAAATAAAAAGAACAGATTTTAGTATAGAAAATATATTAATCTGGGTTGCTTATATATTA
GTTTCCCTGTTTTTTATGTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MLKNAKPLEKWWVWILPLIAVLTVFFLYPLLDVLKLSFTNAEIGRNEYIYTINNYISIFSNGELWSVIKVTFIFVGASVV
FQLLLGLTTALLINKNLPGASIVKLSMISAWVVPGVVTGIIWQIIYSNSSWGILNYFIELLGFEKIPFLYVPSWALFSAT
LANIWRGTGFSGIMQYAALRGIPDQLYEAAAIDGASKWKQFWHITLPQLKPMLMTNLILITIYTFNTYDSVYALTKGGPG
NSTTVISLKAYKQVFRYLDLGKGSAYAVIMLLLSAVFTLIYSKMLYEKE

Sequences:

>Translated_289_residues
MLKNAKPLEKWWVWILPLIAVLTVFFLYPLLDVLKLSFTNAEIGRNEYIYTINNYISIFSNGELWSVIKVTFIFVGASVV
FQLLLGLTTALLINKNLPGASIVKLSMISAWVVPGVVTGIIWQIIYSNSSWGILNYFIELLGFEKIPFLYVPSWALFSAT
LANIWRGTGFSGIMQYAALRGIPDQLYEAAAIDGASKWKQFWHITLPQLKPMLMTNLILITIYTFNTYDSVYALTKGGPG
NSTTVISLKAYKQVFRYLDLGKGSAYAVIMLLLSAVFTLIYSKMLYEKE
>Mature_289_residues
MLKNAKPLEKWWVWILPLIAVLTVFFLYPLLDVLKLSFTNAEIGRNEYIYTINNYISIFSNGELWSVIKVTFIFVGASVV
FQLLLGLTTALLINKNLPGASIVKLSMISAWVVPGVVTGIIWQIIYSNSSWGILNYFIELLGFEKIPFLYVPSWALFSAT
LANIWRGTGFSGIMQYAALRGIPDQLYEAAAIDGASKWKQFWHITLPQLKPMLMTNLILITIYTFNTYDSVYALTKGGPG
NSTTVISLKAYKQVFRYLDLGKGSAYAVIMLLLSAVFTLIYSKMLYEKE

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=306, Percent_Identity=26.1437908496732, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787570, Length=251, Percent_Identity=28.6852589641434, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790465, Length=170, Percent_Identity=30, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32597; Mature: 32597

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNAKPLEKWWVWILPLIAVLTVFFLYPLLDVLKLSFTNAEIGRNEYIYTINNYISIFS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEC
NGELWSVIKVTFIFVGASVVFQLLLGLTTALLINKNLPGASIVKLSMISAWVVPGVVTGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IWQIIYSNSSWGILNYFIELLGFEKIPFLYVPSWALFSATLANIWRGTGFSGIMQYAALR
HHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHC
GIPDQLYEAAAIDGASKWKQFWHITLPQLKPMLMTNLILITIYTFNTYDSVYALTKGGPG
CCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCC
NSTTVISLKAYKQVFRYLDLGKGSAYAVIMLLLSAVFTLIYSKMLYEKE
CCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKNAKPLEKWWVWILPLIAVLTVFFLYPLLDVLKLSFTNAEIGRNEYIYTINNYISIFS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEC
NGELWSVIKVTFIFVGASVVFQLLLGLTTALLINKNLPGASIVKLSMISAWVVPGVVTGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IWQIIYSNSSWGILNYFIELLGFEKIPFLYVPSWALFSATLANIWRGTGFSGIMQYAALR
HHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHC
GIPDQLYEAAAIDGASKWKQFWHITLPQLKPMLMTNLILITIYTFNTYDSVYALTKGGPG
CCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCC
NSTTVISLKAYKQVFRYLDLGKGSAYAVIMLLLSAVFTLIYSKMLYEKE
CCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]