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The map label for this gene is yurM [H]

Identifier: 220932339

GI number: 220932339

Start: 1604274

End: 1605131

Strand: Reverse

Name: yurM [H]

Synonym: Hore_15020

Alternate gene names: 220932339

Gene position: 1605131-1604274 (Counterclockwise)

Preceding gene: 220932340

Following gene: 220932338

Centisome position: 62.26

GC content: 28.09

Gene sequence:

>858_bases
ATGTGTAGATTTATAAAAATAAAAAGAACAGATTTTAGTATAGAAAATATATTAATCTGGGTTGCTTATATATTAGTTTC
CCTGTTTTTTATGTTTCCTGTACTTTGGGTTATTTCATTGTCATTTAAAACTACAGCAGAAGTTTTTGCTTATCCACCAA
ATTTAATACCCAAAAATATTACAATTAATAACTTCATTGAAGTACTAAAAAATACATCTATGTTTCAGTATATACTTAAC
TCTTTTAAATTAGTGCTTTTTACTGTTGTAGGAACTTTATTAGTTGCTATTCCAGCAGGATATAGTTTTTCGCGCTTTAC
CTTTAAAAACAAAAATAAACTATTATTTGCAATATTAGTTTTTCAAATGGTTTCACCGATTATTATTGGAATTCCTCTTT
ACCGATATTATTCAAGTTTAGGATTATTAAATAGTTATTTCGGTTTAATTATGGCTTATATAGCTATTCAGGTTCCTTTT
GCTACTTTTTTGTTAAAAGGTGGTTTTGATAATATTCCTCAAGAAATAGACGAAGCAGCTAAAATAGATGGGGCGACAAG
GATACAGTTATTAACAAAGATTATAGTTCCTGTATCTCTACCTTCAATTGCTAGTGCAATAATATTTATAAGTATTAATT
CCTGGGCTCAATTTTTATTACCGTATTTGTTATTAAATAAAGATAAATTTTATCCTGTTTCTGTAGGGATCTTAATGGCC
CAAGGGACATTTCAACAGATAAGTACACATCTAATAGAAGCAGCAAGTGTATTATCCTTAATTCCTGCGATAATTTTGGT
TCTATTTTTACAAAAATTCATTTTGAAAGCTTTAACTTCTGGAGCTGTTAAAGGGTAA

Upstream 100 bases:

>100_bases
ATCTAGGAAAAGGTTCAGCTTATGCAGTAATAATGTTACTTTTGTCTGCTGTTTTTACTCTAATATACTCCAAAATGCTC
TATGAGAAGGAGTGATTAAA

Downstream 100 bases:

>100_bases
TTACAAGGGGGAGGATGCTATGGAGTTAGAGAAAAAAATTGAACATTATATAGAAAAATCTATTCGACCAAGAATTAGAG
TCGATGGAGGAGATATAAAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MCRFIKIKRTDFSIENILIWVAYILVSLFFMFPVLWVISLSFKTTAEVFAYPPNLIPKNITINNFIEVLKNTSMFQYILN
SFKLVLFTVVGTLLVAIPAGYSFSRFTFKNKNKLLFAILVFQMVSPIIIGIPLYRYYSSLGLLNSYFGLIMAYIAIQVPF
ATFLLKGGFDNIPQEIDEAAKIDGATRIQLLTKIIVPVSLPSIASAIIFISINSWAQFLLPYLLLNKDKFYPVSVGILMA
QGTFQQISTHLIEAASVLSLIPAIILVLFLQKFILKALTSGAVKG

Sequences:

>Translated_285_residues
MCRFIKIKRTDFSIENILIWVAYILVSLFFMFPVLWVISLSFKTTAEVFAYPPNLIPKNITINNFIEVLKNTSMFQYILN
SFKLVLFTVVGTLLVAIPAGYSFSRFTFKNKNKLLFAILVFQMVSPIIIGIPLYRYYSSLGLLNSYFGLIMAYIAIQVPF
ATFLLKGGFDNIPQEIDEAAKIDGATRIQLLTKIIVPVSLPSIASAIIFISINSWAQFLLPYLLLNKDKFYPVSVGILMA
QGTFQQISTHLIEAASVLSLIPAIILVLFLQKFILKALTSGAVKG
>Mature_285_residues
MCRFIKIKRTDFSIENILIWVAYILVSLFFMFPVLWVISLSFKTTAEVFAYPPNLIPKNITINNFIEVLKNTSMFQYILN
SFKLVLFTVVGTLLVAIPAGYSFSRFTFKNKNKLLFAILVFQMVSPIIIGIPLYRYYSSLGLLNSYFGLIMAYIAIQVPF
ATFLLKGGFDNIPQEIDEAAKIDGATRIQLLTKIIVPVSLPSIASAIIFISINSWAQFLLPYLLLNKDKFYPVSVGILMA
QGTFQQISTHLIEAASVLSLIPAIILVLFLQKFILKALTSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=258, Percent_Identity=28.2945736434109, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1790464, Length=274, Percent_Identity=28.1021897810219, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789860, Length=244, Percent_Identity=27.4590163934426, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31978; Mature: 31978

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRFIKIKRTDFSIENILIWVAYILVSLFFMFPVLWVISLSFKTTAEVFAYPPNLIPKNI
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
TINNFIEVLKNTSMFQYILNSFKLVLFTVVGTLLVAIPAGYSFSRFTFKNKNKLLFAILV
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH
FQMVSPIIIGIPLYRYYSSLGLLNSYFGLIMAYIAIQVPFATFLLKGGFDNIPQEIDEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KIDGATRIQLLTKIIVPVSLPSIASAIIFISINSWAQFLLPYLLLNKDKFYPVSVGILMA
HCCCHHHHHHHHHHHHHCCCHHHHHEEHEEEHHHHHHHHHHHHHHCCCCCEEEEHHHHEE
QGTFQQISTHLIEAASVLSLIPAIILVLFLQKFILKALTSGAVKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MCRFIKIKRTDFSIENILIWVAYILVSLFFMFPVLWVISLSFKTTAEVFAYPPNLIPKNI
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
TINNFIEVLKNTSMFQYILNSFKLVLFTVVGTLLVAIPAGYSFSRFTFKNKNKLLFAILV
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH
FQMVSPIIIGIPLYRYYSSLGLLNSYFGLIMAYIAIQVPFATFLLKGGFDNIPQEIDEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KIDGATRIQLLTKIIVPVSLPSIASAIIFISINSWAQFLLPYLLLNKDKFYPVSVGILMA
HCCCHHHHHHHHHHHHHCCCHHHHHEEHEEEHHHHHHHHHHHHHHCCCCCEEEEHHHHEE
QGTFQQISTHLIEAASVLSLIPAIILVLFLQKFILKALTSGAVKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]