| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is kojP [H]
Identifier: 220932292
GI number: 220932292
Start: 1547637
End: 1549973
Strand: Reverse
Name: kojP [H]
Synonym: Hore_14560
Alternate gene names: 220932292
Gene position: 1549973-1547637 (Counterclockwise)
Preceding gene: 220932294
Following gene: 220932291
Centisome position: 60.12
GC content: 39.24
Gene sequence:
>2337_bases ATGAGAAAATACCATCTGAAGAAATTTTACCAGAATCCGCTGTATAAATATGAACCATGGACGATAACTGAGAAAGAATT TAAGATAGAAAATAATCACCACAATGAAACAATTTTTGCCCTCGGTAATGGTTATATGGGATTAAGGGGGACTCTGGAAG AAGATTATTCAGGGCCGGAACAGACAACTACCCCTGGTACATACATAAACGGGGTTTATACTGAAGAGAAAATAATATAC GGAGAAGAGGCACCTGATTTACCGGAGTTTTATCAGACCATGGTCAATCTGGCTGACTGGACTGGAATTAACCTTTACCT TGGTGATGAAAAATTTGATATGTTACAGGGTAAGGTCAGCGGTTATAAACGGGTTCTTGATATGAAGGAAGGGACTTTAA CCAGGGAACTTACCTGGGAGAGTCCTCAGGGAAGGAAAGTTAAGTTAACAATAAAAAGGTTTTTATCCCTGGCATCACCA CATATCGGAGTTATTAAATATAGCTTTACCCCAGTTAATTTTGATGGTACCATAACCGTTGAGTCATCTCTAAAGGGAGA TGTTCAAAATTATCATACCTTAAGAAATAAAAAACCTTTACAGGTAATAGATAAGGCTTTTTCCGATGGAATGCTGTATC TTGTTCATAAAATAAAAAACAGTGGTATTGAAGTGGCTACTGCTGTTAAGAATGTAATTTCAGCTGGTTCAGGTGAAATT GAAACTACTAATAGCCTTATTGAGGGAGATAAGGTTATAAAATTATATAAGATCGAAGCCAGCCAGGGTCAAGAGTATAC TCTAGAGAAATATGCCTGTCTGTACCATTCCCTGGAGATAGATAAAGAAGATATTGTGGATAAAGTTATTACTGAAGTTA GTAAGGCCGCTGAAAAGGGCTGGGATTATCTTTTCGAAAACCATTGTCAATTTTTACAGAACTACTGGGATGATGTTGAT ATTAAAATATACGGAGATGATGCCCTGCAGCAGGCTTTAAGGTTTAATGCCTTTCATCTCATTCAGTCAACCGGGCGTGA CGGAAAGACTAATATTGCTGCCAAAGGACTCACCGGAGAATATTATGAAGGGCATTATTTCTGGGATACAGAAACATATA TATTGCCTTTTTATCTCTATAGTAAACCGGAGATTTCAAAGGATCTACTTATGTTCCGTTACTATACCCTTGATGAAGCC CGGGAAAATGCCCGCAGGATGAGGCTGGATGGGGCCTTATACCCGTGGCGAACGATTAATGGTAAAGAAGCCTCAGGGTT TTTTATGGGTTCAACCGTACAGTATCATATAGATGCTGACATTGCTTATGCCATTAACCTGTATGTAACTGCAACCAGAG ATTATGATTTCTTGTTTAATTACGGCGCTGAAATCCTGTTTGAAACTGCCCGGATGTGGGCCAGCCGGGGGAGTTATATT GAGCTTAAAGGAAATCGCTTCTGTATCAATGAGGTTTGTGGTCCGGATGAATATAAACCGGGAGTCAATAATAATTGTTA TACCAACTATATGGCTAAATTGAATCTGGAACTGGCATTAGAGGCATACCGGTTGATGGAGAAAAAAGCCCCTGATAATT TAAAAAAATTAGTTGAAAAGATTAATTTACAGGATTCAGAACTTGAAGCCTGGAAAAGGGCTGCTGACAACATGTATTTA CCATATAATGAAGAACTGGGAATCCATCCCCAGGACGATTCCTTCCTGTATAAAGACCCTATAGATGTAGATAGCATACC GGAAGAGGATATTCCTCTGGTTAAAAACTGGCATCCCCTGGTTATATGGCGCTACCAGGTAATAAAACAGGCAGATGTAA TTTTATTGATGTTATTACTGGGTGACCAATTTACCACCCAGCAGAAGAAAGCCAACTATGATTTTTATGAACCCAAAACT ACCCATGATTCCTCTTTGTCACCGGCAATTTATAGTATTATTGCCAGTGAAATCGGGTATCATGACTCTGCCTACAATTA CTTTATGCAAACAGCCAGGCTGGACCTGGATGATTATAATAAAAATGCCTATCAGGGTGTCCATACAGCCTGTATGGCCG GAACCTGGCTTGCGTTAGTCCAGGGATTTGCTGGAATGCGTAATTATAATGGCGAACTCCACTTTAGCCCCTGTTTACCG GAAAAGTGGGATGGGTATGAATTTAAGGTTAAGTTCAGGGGAAGACAGCTTAAAATTACTGTAAATGAAGAGGGAGTCAT GTATAAGCTTATTAAAGGTGAAAAATTGAGCTTCTACCATGGAGATAGGAAACTGGAATTAAATTCAGGGGAGGAGCATA ATATAGAAATGGGATAA
Upstream 100 bases:
>100_bases AAATTAATAATAAAATAATTTTTTGATAACACAACTACTTGACTAATATAATTTACTGTTATATAATCAAAATACAACCG GTTGCAAAGGAGGTAATACG
Downstream 100 bases:
>100_bases TTTCTAAATGTTTTTCAAATAAAAATTATTAAAAAAATTTAACTGATAAAAGAAGGATTTTTAAAAAATATGTATAATAT ATTAATTAGGGATAAGCCAT
Product: Kojibiose phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MRKYHLKKFYQNPLYKYEPWTITEKEFKIENNHHNETIFALGNGYMGLRGTLEEDYSGPEQTTTPGTYINGVYTEEKIIY GEEAPDLPEFYQTMVNLADWTGINLYLGDEKFDMLQGKVSGYKRVLDMKEGTLTRELTWESPQGRKVKLTIKRFLSLASP HIGVIKYSFTPVNFDGTITVESSLKGDVQNYHTLRNKKPLQVIDKAFSDGMLYLVHKIKNSGIEVATAVKNVISAGSGEI ETTNSLIEGDKVIKLYKIEASQGQEYTLEKYACLYHSLEIDKEDIVDKVITEVSKAAEKGWDYLFENHCQFLQNYWDDVD IKIYGDDALQQALRFNAFHLIQSTGRDGKTNIAAKGLTGEYYEGHYFWDTETYILPFYLYSKPEISKDLLMFRYYTLDEA RENARRMRLDGALYPWRTINGKEASGFFMGSTVQYHIDADIAYAINLYVTATRDYDFLFNYGAEILFETARMWASRGSYI ELKGNRFCINEVCGPDEYKPGVNNNCYTNYMAKLNLELALEAYRLMEKKAPDNLKKLVEKINLQDSELEAWKRAADNMYL PYNEELGIHPQDDSFLYKDPIDVDSIPEEDIPLVKNWHPLVIWRYQVIKQADVILLMLLLGDQFTTQQKKANYDFYEPKT THDSSLSPAIYSIIASEIGYHDSAYNYFMQTARLDLDDYNKNAYQGVHTACMAGTWLALVQGFAGMRNYNGELHFSPCLP EKWDGYEFKVKFRGRQLKITVNEEGVMYKLIKGEKLSFYHGDRKLELNSGEEHNIEMG
Sequences:
>Translated_778_residues MRKYHLKKFYQNPLYKYEPWTITEKEFKIENNHHNETIFALGNGYMGLRGTLEEDYSGPEQTTTPGTYINGVYTEEKIIY GEEAPDLPEFYQTMVNLADWTGINLYLGDEKFDMLQGKVSGYKRVLDMKEGTLTRELTWESPQGRKVKLTIKRFLSLASP HIGVIKYSFTPVNFDGTITVESSLKGDVQNYHTLRNKKPLQVIDKAFSDGMLYLVHKIKNSGIEVATAVKNVISAGSGEI ETTNSLIEGDKVIKLYKIEASQGQEYTLEKYACLYHSLEIDKEDIVDKVITEVSKAAEKGWDYLFENHCQFLQNYWDDVD IKIYGDDALQQALRFNAFHLIQSTGRDGKTNIAAKGLTGEYYEGHYFWDTETYILPFYLYSKPEISKDLLMFRYYTLDEA RENARRMRLDGALYPWRTINGKEASGFFMGSTVQYHIDADIAYAINLYVTATRDYDFLFNYGAEILFETARMWASRGSYI ELKGNRFCINEVCGPDEYKPGVNNNCYTNYMAKLNLELALEAYRLMEKKAPDNLKKLVEKINLQDSELEAWKRAADNMYL PYNEELGIHPQDDSFLYKDPIDVDSIPEEDIPLVKNWHPLVIWRYQVIKQADVILLMLLLGDQFTTQQKKANYDFYEPKT THDSSLSPAIYSIIASEIGYHDSAYNYFMQTARLDLDDYNKNAYQGVHTACMAGTWLALVQGFAGMRNYNGELHFSPCLP EKWDGYEFKVKFRGRQLKITVNEEGVMYKLIKGEKLSFYHGDRKLELNSGEEHNIEMG >Mature_778_residues MRKYHLKKFYQNPLYKYEPWTITEKEFKIENNHHNETIFALGNGYMGLRGTLEEDYSGPEQTTTPGTYINGVYTEEKIIY GEEAPDLPEFYQTMVNLADWTGINLYLGDEKFDMLQGKVSGYKRVLDMKEGTLTRELTWESPQGRKVKLTIKRFLSLASP HIGVIKYSFTPVNFDGTITVESSLKGDVQNYHTLRNKKPLQVIDKAFSDGMLYLVHKIKNSGIEVATAVKNVISAGSGEI ETTNSLIEGDKVIKLYKIEASQGQEYTLEKYACLYHSLEIDKEDIVDKVITEVSKAAEKGWDYLFENHCQFLQNYWDDVD IKIYGDDALQQALRFNAFHLIQSTGRDGKTNIAAKGLTGEYYEGHYFWDTETYILPFYLYSKPEISKDLLMFRYYTLDEA RENARRMRLDGALYPWRTINGKEASGFFMGSTVQYHIDADIAYAINLYVTATRDYDFLFNYGAEILFETARMWASRGSYI ELKGNRFCINEVCGPDEYKPGVNNNCYTNYMAKLNLELALEAYRLMEKKAPDNLKKLVEKINLQDSELEAWKRAADNMYL PYNEELGIHPQDDSFLYKDPIDVDSIPEEDIPLVKNWHPLVIWRYQVIKQADVILLMLLLGDQFTTQQKKANYDFYEPKT THDSSLSPAIYSIIASEIGYHDSAYNYFMQTARLDLDDYNKNAYQGVHTACMAGTWLALVQGFAGMRNYNGELHFSPCLP EKWDGYEFKVKFRGRQLKITVNEEGVMYKLIKGEKLSFYHGDRKLELNSGEEHNIEMG
Specific function: Hydrolyzes kojibiose in the presence of an inorganic phosphoric acid to form D-glucose and beta-D-glucose-1-phosphoric acid. Can act with alpha-1,2-oligoglucans, such as selaginose, as substrate, but more slowly. Inactive when dissaccharides with linkages
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=482, Percent_Identity=22.1991701244813, Blast_Score=117, Evalue=3e-26, Organism=Escherichia coli, GI1787575, Length=753, Percent_Identity=29.3492695883134, Blast_Score=349, Evalue=4e-97, Organism=Saccharomyces cerevisiae, GI6325283, Length=487, Percent_Identity=22.5872689938398, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24583760, Length=362, Percent_Identity=25.1381215469613, Blast_Score=98, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: =2.4.1.230 [H]
Molecular weight: Translated: 89946; Mature: 89946
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYHLKKFYQNPLYKYEPWTITEKEFKIENNHHNETIFALGNGYMGLRGTLEEDYSGPE CCCCHHHHHHCCCCEEECCEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCHHCCCCCC QTTTPGTYINGVYTEEKIIYGEEAPDLPEFYQTMVNLADWTGINLYLGDEKFDMLQGKVS CCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH GYKRVLDMKEGTLTRELTWESPQGRKVKLTIKRFLSLASPHIGVIKYSFTPVNFDGTITV HHHHHHHCCCCCEEEEEECCCCCCCEEEEEHHHHHHHCCCCEEEEEEEEEEECCCCEEEE ESSLKGDVQNYHTLRNKKPLQVIDKAFSDGMLYLVHKIKNSGIEVATAVKNVISAGSGEI CCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHHCCCCCC ETTNSLIEGDKVIKLYKIEASQGQEYTLEKYACLYHSLEIDKEDIVDKVITEVSKAAEKG CCCHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WDYLFENHCQFLQNYWDDVDIKIYGDDALQQALRFNAFHLIQSTGRDGKTNIAAKGLTGE HHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHEEHHHCCCCCCCCEEEECCCCC YYEGHYFWDTETYILPFYLYSKPEISKDLLMFRYYTLDEARENARRMRLDGALYPWRTIN CCCCEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECC GKEASGFFMGSTVQYHIDADIAYAINLYVTATRDYDFLFNYGAEILFETARMWASRGSYI CCCCCCEEECCEEEEEECCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEE ELKGNRFCINEVCGPDEYKPGVNNNCYTNYMAKLNLELALEAYRLMEKKAPDNLKKLVEK EECCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHH INLQDSELEAWKRAADNMYLPYNEELGIHPQDDSFLYKDPIDVDSIPEEDIPLVKNWHPL HCCCCHHHHHHHHHHCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCE VIWRYQVIKQADVILLMLLLGDQFTTQQKKANYDFYEPKTTHDSSLSPAIYSIIASEIGY EEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC HDSAYNYFMQTARLDLDDYNKNAYQGVHTACMAGTWLALVQGFAGMRNYNGELHFSPCLP CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC EKWDGYEFKVKFRGRQLKITVNEEGVMYKLIKGEKLSFYHGDRKLELNSGEEHNIEMG CCCCCEEEEEEECCEEEEEEECCCCEEEEEECCCEEEEEECCEEEEECCCCCCCCCCC >Mature Secondary Structure MRKYHLKKFYQNPLYKYEPWTITEKEFKIENNHHNETIFALGNGYMGLRGTLEEDYSGPE CCCCHHHHHHCCCCEEECCEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCHHCCCCCC QTTTPGTYINGVYTEEKIIYGEEAPDLPEFYQTMVNLADWTGINLYLGDEKFDMLQGKVS CCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH GYKRVLDMKEGTLTRELTWESPQGRKVKLTIKRFLSLASPHIGVIKYSFTPVNFDGTITV HHHHHHHCCCCCEEEEEECCCCCCCEEEEEHHHHHHHCCCCEEEEEEEEEEECCCCEEEE ESSLKGDVQNYHTLRNKKPLQVIDKAFSDGMLYLVHKIKNSGIEVATAVKNVISAGSGEI CCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHHCCCCCC ETTNSLIEGDKVIKLYKIEASQGQEYTLEKYACLYHSLEIDKEDIVDKVITEVSKAAEKG CCCHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WDYLFENHCQFLQNYWDDVDIKIYGDDALQQALRFNAFHLIQSTGRDGKTNIAAKGLTGE HHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHEEHHHCCCCCCCCEEEECCCCC YYEGHYFWDTETYILPFYLYSKPEISKDLLMFRYYTLDEARENARRMRLDGALYPWRTIN CCCCEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECC GKEASGFFMGSTVQYHIDADIAYAINLYVTATRDYDFLFNYGAEILFETARMWASRGSYI CCCCCCEEECCEEEEEECCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEE ELKGNRFCINEVCGPDEYKPGVNNNCYTNYMAKLNLELALEAYRLMEKKAPDNLKKLVEK EECCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHH INLQDSELEAWKRAADNMYLPYNEELGIHPQDDSFLYKDPIDVDSIPEEDIPLVKNWHPL HCCCCHHHHHHHHHHCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCE VIWRYQVIKQADVILLMLLLGDQFTTQQKKANYDFYEPKTTHDSSLSPAIYSIIASEIGY EEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC HDSAYNYFMQTARLDLDDYNKNAYQGVHTACMAGTWLALVQGFAGMRNYNGELHFSPCLP CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC EKWDGYEFKVKFRGRQLKITVNEEGVMYKLIKGEKLSFYHGDRKLELNSGEEHNIEMG CCCCCEEEEEEECCEEEEEEECCCCEEEEEECCCEEEEEECCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA