| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yhbE [C]
Identifier: 220932286
GI number: 220932286
Start: 1539871
End: 1540731
Strand: Reverse
Name: yhbE [C]
Synonym: Hore_14500
Alternate gene names: 220932286
Gene position: 1540731-1539871 (Counterclockwise)
Preceding gene: 220932287
Following gene: 220932285
Centisome position: 59.76
GC content: 39.02
Gene sequence:
>861_bases ATGTCTGAGACAGAGAAGAGACTATACTTAATCCTTGGTATTGCAGTTGTTATCCTTTCATTTTCAGGCATATTAATTAA AGTAGCCACTGCACCACCATTAATTGTAGCCTTTTATAGAATGTTTCTCAGTGCTTTAATACTGACACCTGTTTTTTTTC TTAAGTATAATAACTGGAAGATATTTTTAGATTACCGGCCTATGCTGGTGGGTTTATTACTGGCCGGACATTTTATTTTA TGGATTACTGCCTTTGAGTATACCAGTGTGGCCAGTGCAGTTATATTTATTGCCTTACAGCCTCTGTTTACATTACTCCT TGAGTTTTTATTTGCCAGGGAAGATATGCAGGAAGGGGTTCTTATTGGTATTGTTATGGCCCTTGTGGGTAGTATTATTA TTAGTTACGGTGACCTGGAATTATTATTTTCAAGGGTTATCGGAGATTTACTGGCTGTAAGTGCATCTTTTTTTGCAGCC AGTTACCTTTTTGCCGGTAGAAGTCTGCGAAAAAAGCTGGATTATTTCCCATATCTCTATGTTGTCTATTCCTATGCCAC TCTTTTTCTGGGAATAATTGTTTTAGTATTAGACCTCCCGTTGACCGGGTATGGTACTATTAATTATTTGTGTTTTATAG GCCTGGCCCTCGGTCCTACCCTGGTGGGACACTCCCTCTTAAACTGGTCGGTACGGAGGGTTTCATCTACAGTTGTATCC CTTGCTATACTCGGGGAGCCTGTACTTACAACTATATTCGCCTGGTTACTGTTAAATGAAGTGATTACATTTTCAAACAT TATTGGGGGGGTATTTATTCTGGGTGGTATTTACCGGGTAACCTTTATTCGTAGTCACTAA
Upstream 100 bases:
>100_bases ATAAGGTTTTAACAATTGGTTTTATTTAACAATTGGTTATTTTTTTAGATTACAAACTAAAATTATTCTGTATTAATGTA AGAAGTAAAGGAGGTTCTTA
Downstream 100 bases:
>100_bases AAATTAATTTATAAATTTATTATTATGTAAATTTGGTAAATTAATCTCCGGTTCCAGCTGGAAAATTACTGTTGCTTTCA TCTACTACACCCCGGATTTA
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSETEKRLYLILGIAVVILSFSGILIKVATAPPLIVAFYRMFLSALILTPVFFLKYNNWKIFLDYRPMLVGLLLAGHFIL WITAFEYTSVASAVIFIALQPLFTLLLEFLFAREDMQEGVLIGIVMALVGSIIISYGDLELLFSRVIGDLLAVSASFFAA SYLFAGRSLRKKLDYFPYLYVVYSYATLFLGIIVLVLDLPLTGYGTINYLCFIGLALGPTLVGHSLLNWSVRRVSSTVVS LAILGEPVLTTIFAWLLLNEVITFSNIIGGVFILGGIYRVTFIRSH
Sequences:
>Translated_286_residues MSETEKRLYLILGIAVVILSFSGILIKVATAPPLIVAFYRMFLSALILTPVFFLKYNNWKIFLDYRPMLVGLLLAGHFIL WITAFEYTSVASAVIFIALQPLFTLLLEFLFAREDMQEGVLIGIVMALVGSIIISYGDLELLFSRVIGDLLAVSASFFAA SYLFAGRSLRKKLDYFPYLYVVYSYATLFLGIIVLVLDLPLTGYGTINYLCFIGLALGPTLVGHSLLNWSVRRVSSTVVS LAILGEPVLTTIFAWLLLNEVITFSNIIGGVFILGGIYRVTFIRSH >Mature_285_residues SETEKRLYLILGIAVVILSFSGILIKVATAPPLIVAFYRMFLSALILTPVFFLKYNNWKIFLDYRPMLVGLLLAGHFILW ITAFEYTSVASAVIFIALQPLFTLLLEFLFAREDMQEGVLIGIVMALVGSIIISYGDLELLFSRVIGDLLAVSASFFAAS YLFAGRSLRKKLDYFPYLYVVYSYATLFLGIIVLVLDLPLTGYGTINYLCFIGLALGPTLVGHSLLNWSVRRVSSTVVSL AILGEPVLTTIFAWLLLNEVITFSNIIGGVFILGGIYRVTFIRSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31814; Mature: 31682
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETEKRLYLILGIAVVILSFSGILIKVATAPPLIVAFYRMFLSALILTPVFFLKYNNWK CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCEE IFLDYRPMLVGLLLAGHFILWITAFEYTSVASAVIFIALQPLFTLLLEFLFAREDMQEGV EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LIGIVMALVGSIIISYGDLELLFSRVIGDLLAVSASFFAASYLFAGRSLRKKLDYFPYLY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYSYATLFLGIIVLVLDLPLTGYGTINYLCFIGLALGPTLVGHSLLNWSVRRVSSTVVS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAILGEPVLTTIFAWLLLNEVITFSNIIGGVFILGGIYRVTFIRSH HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure SETEKRLYLILGIAVVILSFSGILIKVATAPPLIVAFYRMFLSALILTPVFFLKYNNWK CCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCEE IFLDYRPMLVGLLLAGHFILWITAFEYTSVASAVIFIALQPLFTLLLEFLFAREDMQEGV EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LIGIVMALVGSIIISYGDLELLFSRVIGDLLAVSASFFAASYLFAGRSLRKKLDYFPYLY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYSYATLFLGIIVLVLDLPLTGYGTINYLCFIGLALGPTLVGHSLLNWSVRRVSSTVVS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAILGEPVLTTIFAWLLLNEVITFSNIIGGVFILGGIYRVTFIRSH HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA