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The map label for this gene is yhdE [C]

Identifier: 220932262

GI number: 220932262

Start: 1513601

End: 1514179

Strand: Reverse

Name: yhdE [C]

Synonym: Hore_14260

Alternate gene names: 220932262

Gene position: 1514179-1513601 (Counterclockwise)

Preceding gene: 220932263

Following gene: 220932261

Centisome position: 58.73

GC content: 40.76

Gene sequence:

>579_bases
ATGGCTCTTAAACTGGTACTGGCATCTTCTTCACCGCGAAGGGAAAAATTACTTAAATTGATGGGATTGAAATTTACTAT
CGTTCCGAGTAAAATAGATGAGAGTGTATATACAAATTTGCCCCCCAGGGATATGGTTCAGGAACTGGCCAGGGCCAAAG
CAAGTGAAGTTGGAGAACTGGTCGAGGAATCATGTGTAATAGCTGCTGATACTGTTGTGGTTAAGGGGAATAAAATACTC
GGTAAACCCTCCAGCCATGAAGAAGCTATAGACATGCTTTCCGGCCTTCAGGGGGAGAAACATACTGTATTAACAGGACT
TGCAGTTTTGTCAACAGAAAATGGCAAAATACTGGTAGATTATGATAAAACTGATGTTTATATGAGGGAAATGGACAAAC
AGGAGATTATCTCCTATGTTAATACCGGTGAACCCATGGATAAAGCGGGTTCCTATGCTATTCAGGGTCTCGGTGGAATT
TTTGTGGAACGCATTAAGGGTTCTTATTTTACGGTAATGGGTCTTCCCATCCATAAGTTATCCTTGATGCTAAAAGAGTT
TTCCATTGATGTGATTTAG

Upstream 100 bases:

>100_bases
TATTTAGTGTTGATGGCTATTCCCACCGGAATAGGGGTAGGATTAGCTTCATACTTTACGGTTAATTATCTTCCCGAAAC
TTTTTTAAGGGGGAGTAACT

Downstream 100 bases:

>100_bases
GTCCGGGTTAAACCCGGCCTTCATCAAATTATATATGTTGGTGCTGGTGGAGAGGAGTAAGGAGTGGAGAATGGAGTATC
GATATACCATTAAAGAATTA

Product: maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MALKLVLASSSPRREKLLKLMGLKFTIVPSKIDESVYTNLPPRDMVQELARAKASEVGELVEESCVIAADTVVVKGNKIL
GKPSSHEEAIDMLSGLQGEKHTVLTGLAVLSTENGKILVDYDKTDVYMREMDKQEIISYVNTGEPMDKAGSYAIQGLGGI
FVERIKGSYFTVMGLPIHKLSLMLKEFSIDVI

Sequences:

>Translated_192_residues
MALKLVLASSSPRREKLLKLMGLKFTIVPSKIDESVYTNLPPRDMVQELARAKASEVGELVEESCVIAADTVVVKGNKIL
GKPSSHEEAIDMLSGLQGEKHTVLTGLAVLSTENGKILVDYDKTDVYMREMDKQEIISYVNTGEPMDKAGSYAIQGLGGI
FVERIKGSYFTVMGLPIHKLSLMLKEFSIDVI
>Mature_191_residues
ALKLVLASSSPRREKLLKLMGLKFTIVPSKIDESVYTNLPPRDMVQELARAKASEVGELVEESCVIAADTVVVKGNKILG
KPSSHEEAIDMLSGLQGEKHTVLTGLAVLSTENGKILVDYDKTDVYMREMDKQEIISYVNTGEPMDKAGSYAIQGLGGIF
VERIKGSYFTVMGLPIHKLSLMLKEFSIDVI

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=195, Percent_Identity=38.4615384615385, Blast_Score=132, Evalue=2e-31,
Organism=Homo sapiens, GI291045183, Length=183, Percent_Identity=36.6120218579235, Blast_Score=118, Evalue=3e-27,
Organism=Homo sapiens, GI291045181, Length=149, Percent_Identity=38.255033557047, Blast_Score=101, Evalue=3e-22,
Organism=Homo sapiens, GI310133124, Length=125, Percent_Identity=40, Blast_Score=99, Evalue=2e-21,
Organism=Escherichia coli, GI1789646, Length=185, Percent_Identity=39.4594594594595, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI87081830, Length=183, Percent_Identity=33.879781420765, Blast_Score=108, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI193202443, Length=186, Percent_Identity=37.0967741935484, Blast_Score=110, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6324685, Length=200, Percent_Identity=26.5, Blast_Score=69, Evalue=6e-13,
Organism=Drosophila melanogaster, GI78706856, Length=197, Percent_Identity=39.5939086294416, Blast_Score=134, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 21062; Mature: 20931

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKLVLASSSPRREKLLKLMGLKFTIVPSKIDESVYTNLPPRDMVQELARAKASEVGEL
CEEEEEEECCCCHHHHHHHHHCCEEEEECCHHCHHHHCCCCHHHHHHHHHHHHHHHHHHH
VEESCVIAADTVVVKGNKILGKPSSHEEAIDMLSGLQGEKHTVLTGLAVLSTENGKILVD
HHHCCEEEECEEEEECCEEECCCCCHHHHHHHHHCCCCCCHHHHHHEEEEECCCCEEEEE
YDKTDVYMREMDKQEIISYVNTGEPMDKAGSYAIQGLGGIFVERIKGSYFTVMGLPIHKL
ECCHHHHHHHCCHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHH
SLMLKEFSIDVI
HHHHHHHCCCCC
>Mature Secondary Structure 
ALKLVLASSSPRREKLLKLMGLKFTIVPSKIDESVYTNLPPRDMVQELARAKASEVGEL
EEEEEEECCCCHHHHHHHHHCCEEEEECCHHCHHHHCCCCHHHHHHHHHHHHHHHHHHH
VEESCVIAADTVVVKGNKILGKPSSHEEAIDMLSGLQGEKHTVLTGLAVLSTENGKILVD
HHHCCEEEECEEEEECCEEECCCCCHHHHHHHHHCCCCCCHHHHHHEEEEECCCCEEEEE
YDKTDVYMREMDKQEIISYVNTGEPMDKAGSYAIQGLGGIFVERIKGSYFTVMGLPIHKL
ECCHHHHHHHCCHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHH
SLMLKEFSIDVI
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA