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The map label for this gene is 220932251

Identifier: 220932251

GI number: 220932251

Start: 1502649

End: 1504529

Strand: Reverse

Name: 220932251

Synonym: Hore_14150

Alternate gene names: NA

Gene position: 1504529-1502649 (Counterclockwise)

Preceding gene: 220932252

Following gene: 220932250

Centisome position: 58.36

GC content: 41.57

Gene sequence:

>1881_bases
GTGATTGTAAAAGACCAGCTAGAGAAAATATTATACCGGGTTAACAGTCCAACAAGGTACATTGGGGATGAATGGAATGC
TGTTAAAAAAGAATGGACCCCCGATAAAATTAAAGTGGCGGTGGCTTTTCCCGATGTTTATGAAATCGGGATGTCCCATC
TTGGTTTGAAAATAATATATCACCTTTTAAATAAACAGGATGACATAATCTGTGAGCGGACCTATGCACCCTGGGTTGAT
ATGGAAGAAGAGTTGCGCAAAAATGATATTCCTCTTTTTTCCCTGGAGAGTAAACATGAAATAAAAGACTTTGATATTCT
TGGTTTTACTCTTCAGTATGAAATGAGTTACACCAATATTTTGACCATGATAGATCTGGCCGGTTTACCCTTACATAGTA
AAGATAGGGGAGAGGAGTACCCCCTGGTAATAGGGGGAGGTTCGACTGTTTTTAACCCGGAACCCCTGGCCCCCTTTTTT
GATTTGTTTTTCATCGGGGAAGCAGAAACAGGTATTGTTGAACTGGTGAGAAGATATGATCAGTATAAACAAAGAGGTTT
AAACAGGGAGGATATTTTATTAAAATTATCTGAGATACCGGGGGTTTATGTACCTTCATTATATGAACTGGAGTATGGAA
ATGAAGGTCAGGTGGTTTCTATAGATACGGTAAAACCAGGGGTAAAGGAACGGATAAAGAAACAGGTAGTAAATGATCTT
GATAAATCATTTCATCCAGTGGATTTTATTGTCCCCTATAAAAGTATTGTCCATGACCGGGCTGTCGTAGAAATTGCCCG
GGGCTGTACGCGTGGCTGTCGCTTTTGTGCTGCCGGTATCTCTTACCGCCCGGTCCGGGAAAGGAAAAAAGATACCATTG
TCAGGCTAGCTGATAAGATTTTAACCAGCACCGGATATGAAGAACTGTCGCTGGTTTCTTTAAGTACCATTGATTACAGT
GGCATAGAGGATTTAATAAAGACCCTGGCAACAAGATATGAGGACAGGAGAATTAGTATATCCCTGCCTTCGTTGCGGGT
TGACAGGTTTTCGGTAAACCTGGCCAAAGAGGTTCAGAGAGTCAGGAAATCAGGTCTGACCTTTGCCCCGGAGGCCGGTA
CCCAGCGGTTACGGGATGTAATTAATAAGGGGGTTAAAGAGGAAGACCTGTATGAAGCTGTTACGTCTGCCTTTAAAGAA
GGGTGGTCAACCCTAAAGCTTTACTTTATGATTGGACTACCTACTGAGACAGAGGAGGATATTGCCGGAATTGTTAAACT
GGCAAAGAAAGTTCTCGAACTAGGTAAGGAGATAAGGCGATCTAACAAGAAAAAGATGAAACCAATAAAGGTTCAGGTCA
GTGTTTCGACCTTTATTCCCAAACCTTTCACTCCATTTCAGTGGGTGGCAATGGATGATAAGGATACTATTATTGAAAAA
CAGAACTATCTTAAGAAAAATTTAAGGGGGAGGGGACTATCTTTCAGCTGGAATGACCCTGATTTGAGTATTCTGGAAGG
CATTTTTTCCCGGGGTGATAGAAGACTGGCCTCTACTCTGGAACAGGCCTGGGCGATGGGCTGTCGTTTTGACGGCTGGA
ATGAACATTTTAATATGGATAAATGGTTAAGGGCCTTTGAAAAGAGTGGGGTTGATATTGATACATATTTAAAGAAAAGG
GATATTAATGAAATACTTCCCTGGGATCATATAGATATGGGGGTTTCTAAAAAGTTTTTAATAAAAGAATATGAAGCAGC
CCTCCGTGGGGAAACTACTGAAGATTGCAGGAATGGTTACTGTCCGGGATGTGCTGTCTGCTTTAACCTTGATGCTAAAC
TGGAGTTAGTAGGGGCTGATAACAGTGAAAATCAGGGCTAA

Upstream 100 bases:

>100_bases
ACAGAATCACAGTTGATAGATTCTTTTTTCCGGTTAAAAAAGCATAACATTAAATTAAATGATATAATAAGAAAATGAGA
AATATATGGGGGTGGTTGTG

Downstream 100 bases:

>100_bases
GTTTAAAAAATTTGGTTCGTTGAAATATATATCTCATCTGGAATTAATGAATACTTTACAGCGGGCTTTCAGGCGGGCTA
AATTACCCCTCGCCTATTCC

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MIVKDQLEKILYRVNSPTRYIGDEWNAVKKEWTPDKIKVAVAFPDVYEIGMSHLGLKIIYHLLNKQDDIICERTYAPWVD
MEEELRKNDIPLFSLESKHEIKDFDILGFTLQYEMSYTNILTMIDLAGLPLHSKDRGEEYPLVIGGGSTVFNPEPLAPFF
DLFFIGEAETGIVELVRRYDQYKQRGLNREDILLKLSEIPGVYVPSLYELEYGNEGQVVSIDTVKPGVKERIKKQVVNDL
DKSFHPVDFIVPYKSIVHDRAVVEIARGCTRGCRFCAAGISYRPVRERKKDTIVRLADKILTSTGYEELSLVSLSTIDYS
GIEDLIKTLATRYEDRRISISLPSLRVDRFSVNLAKEVQRVRKSGLTFAPEAGTQRLRDVINKGVKEEDLYEAVTSAFKE
GWSTLKLYFMIGLPTETEEDIAGIVKLAKKVLELGKEIRRSNKKKMKPIKVQVSVSTFIPKPFTPFQWVAMDDKDTIIEK
QNYLKKNLRGRGLSFSWNDPDLSILEGIFSRGDRRLASTLEQAWAMGCRFDGWNEHFNMDKWLRAFEKSGVDIDTYLKKR
DINEILPWDHIDMGVSKKFLIKEYEAALRGETTEDCRNGYCPGCAVCFNLDAKLELVGADNSENQG

Sequences:

>Translated_626_residues
MIVKDQLEKILYRVNSPTRYIGDEWNAVKKEWTPDKIKVAVAFPDVYEIGMSHLGLKIIYHLLNKQDDIICERTYAPWVD
MEEELRKNDIPLFSLESKHEIKDFDILGFTLQYEMSYTNILTMIDLAGLPLHSKDRGEEYPLVIGGGSTVFNPEPLAPFF
DLFFIGEAETGIVELVRRYDQYKQRGLNREDILLKLSEIPGVYVPSLYELEYGNEGQVVSIDTVKPGVKERIKKQVVNDL
DKSFHPVDFIVPYKSIVHDRAVVEIARGCTRGCRFCAAGISYRPVRERKKDTIVRLADKILTSTGYEELSLVSLSTIDYS
GIEDLIKTLATRYEDRRISISLPSLRVDRFSVNLAKEVQRVRKSGLTFAPEAGTQRLRDVINKGVKEEDLYEAVTSAFKE
GWSTLKLYFMIGLPTETEEDIAGIVKLAKKVLELGKEIRRSNKKKMKPIKVQVSVSTFIPKPFTPFQWVAMDDKDTIIEK
QNYLKKNLRGRGLSFSWNDPDLSILEGIFSRGDRRLASTLEQAWAMGCRFDGWNEHFNMDKWLRAFEKSGVDIDTYLKKR
DINEILPWDHIDMGVSKKFLIKEYEAALRGETTEDCRNGYCPGCAVCFNLDAKLELVGADNSENQG
>Mature_626_residues
MIVKDQLEKILYRVNSPTRYIGDEWNAVKKEWTPDKIKVAVAFPDVYEIGMSHLGLKIIYHLLNKQDDIICERTYAPWVD
MEEELRKNDIPLFSLESKHEIKDFDILGFTLQYEMSYTNILTMIDLAGLPLHSKDRGEEYPLVIGGGSTVFNPEPLAPFF
DLFFIGEAETGIVELVRRYDQYKQRGLNREDILLKLSEIPGVYVPSLYELEYGNEGQVVSIDTVKPGVKERIKKQVVNDL
DKSFHPVDFIVPYKSIVHDRAVVEIARGCTRGCRFCAAGISYRPVRERKKDTIVRLADKILTSTGYEELSLVSLSTIDYS
GIEDLIKTLATRYEDRRISISLPSLRVDRFSVNLAKEVQRVRKSGLTFAPEAGTQRLRDVINKGVKEEDLYEAVTSAFKE
GWSTLKLYFMIGLPTETEEDIAGIVKLAKKVLELGKEIRRSNKKKMKPIKVQVSVSTFIPKPFTPFQWVAMDDKDTIIEK
QNYLKKNLRGRGLSFSWNDPDLSILEGIFSRGDRRLASTLEQAWAMGCRFDGWNEHFNMDKWLRAFEKSGVDIDTYLKKR
DINEILPWDHIDMGVSKKFLIKEYEAALRGETTEDCRNGYCPGCAVCFNLDAKLELVGADNSENQG

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 71692; Mature: 71692

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKDQLEKILYRVNSPTRYIGDEWNAVKKEWTPDKIKVAVAFPDVYEIGMSHLGLKIIY
CCCHHHHHHHHHHCCCCCHHCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
HLLNKQDDIICERTYAPWVDMEEELRKNDIPLFSLESKHEIKDFDILGFTLQYEMSYTNI
HHHCCCCCEEEECCCCCCCCCHHHHHHCCCCEEECCCCCCCCCEEEEEEEEEEECHHHHH
LTMIDLAGLPLHSKDRGEEYPLVIGGGSTVFNPEPLAPFFDLFFIGEAETGIVELVRRYD
HHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHEEECCCCHHHHHHHHHHH
QYKQRGLNREDILLKLSEIPGVYVPSLYELEYGNEGQVVSIDTVKPGVKERIKKQVVNDL
HHHHCCCCHHHHEEEHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHH
DKSFHPVDFIVPYKSIVHDRAVVEIARGCTRGCRFCAAGISYRPVRERKKDTIVRLADKI
HHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LTSTGYEELSLVSLSTIDYSGIEDLIKTLATRYEDRRISISLPSLRVDRFSVNLAKEVQR
HHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHHHHH
VRKSGLTFAPEAGTQRLRDVINKGVKEEDLYEAVTSAFKEGWSTLKLYFMIGLPTETEED
HHHCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHEEEEEEEEECCCCCHHH
IAGIVKLAKKVLELGKEIRRSNKKKMKPIKVQVSVSTFIPKPFTPFQWVAMDDKDTIIEK
HHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEEEEECCCCCCCCEEEEECCCHHHHHH
QNYLKKNLRGRGLSFSWNDPDLSILEGIFSRGDRRLASTLEQAWAMGCRFDGWNEHFNMD
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
KWLRAFEKSGVDIDTYLKKRDINEILPWDHIDMGVSKKFLIKEYEAALRGETTEDCRNGY
HHHHHHHHCCCCHHHHHHHHCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCC
CPGCAVCFNLDAKLELVGADNSENQG
CCCEEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure
MIVKDQLEKILYRVNSPTRYIGDEWNAVKKEWTPDKIKVAVAFPDVYEIGMSHLGLKIIY
CCCHHHHHHHHHHCCCCCHHCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
HLLNKQDDIICERTYAPWVDMEEELRKNDIPLFSLESKHEIKDFDILGFTLQYEMSYTNI
HHHCCCCCEEEECCCCCCCCCHHHHHHCCCCEEECCCCCCCCCEEEEEEEEEEECHHHHH
LTMIDLAGLPLHSKDRGEEYPLVIGGGSTVFNPEPLAPFFDLFFIGEAETGIVELVRRYD
HHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHEEECCCCHHHHHHHHHHH
QYKQRGLNREDILLKLSEIPGVYVPSLYELEYGNEGQVVSIDTVKPGVKERIKKQVVNDL
HHHHCCCCHHHHEEEHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHH
DKSFHPVDFIVPYKSIVHDRAVVEIARGCTRGCRFCAAGISYRPVRERKKDTIVRLADKI
HHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LTSTGYEELSLVSLSTIDYSGIEDLIKTLATRYEDRRISISLPSLRVDRFSVNLAKEVQR
HHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHHHHH
VRKSGLTFAPEAGTQRLRDVINKGVKEEDLYEAVTSAFKEGWSTLKLYFMIGLPTETEED
HHHCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHEEEEEEEEECCCCCHHH
IAGIVKLAKKVLELGKEIRRSNKKKMKPIKVQVSVSTFIPKPFTPFQWVAMDDKDTIIEK
HHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEEEEECCCCCCCCEEEEECCCHHHHHH
QNYLKKNLRGRGLSFSWNDPDLSILEGIFSRGDRRLASTLEQAWAMGCRFDGWNEHFNMD
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
KWLRAFEKSGVDIDTYLKKRDINEILPWDHIDMGVSKKFLIKEYEAALRGETTEDCRNGY
HHHHHHHHCCCCHHHHHHHHCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCC
CPGCAVCFNLDAKLELVGADNSENQG
CCCEEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]