Click here to switch to the map view.

The map label for this gene is 220932250

Identifier: 220932250

GI number: 220932250

Start: 1501967

End: 1502665

Strand: Reverse

Name: 220932250

Synonym: Hore_14140

Alternate gene names: NA

Gene position: 1502665-1501967 (Counterclockwise)

Preceding gene: 220932251

Following gene: 220932249

Centisome position: 58.28

GC content: 40.92

Gene sequence:

>699_bases
GTGAAAATCAGGGCTAAGTTTAAAAAATTTGGTTCGTTGAAATATATATCTCATCTGGAATTAATGAATACTTTACAGCG
GGCTTTCAGGCGGGCTAAATTACCCCTCGCCTATTCCAGGGGATATAACCCCCACCCCAGGCTTTCTATGGGAATGGCCC
TTTCCGTGGGATTAACGGGACTTGGTGAATATTTTGATGTTGAACTGGAACAGGAAATTGAACCCGGGTTATTTATAAAA
CGGGCTAATAAATGTTTACCACATGGTTTAGAGATTCTTCGGGCCCGAAAGATTCCCGACAGGCTAAAGTCATTGATGGC
CCAGGTTGATACAGCGATGTACAGGGTGGAGATGGATTTTGACGGGAAGATTGATGGCAGGTCTATCATTAAAGACTTCC
TGTCCAGGCAGGAAATCAGGATTATACGGAAGAGGAGAAAGAAAAAAGATAAGGAAATAAACATCAGACCCTTAATCAAG
GGTATCGAGATTGAGGAAGACAATATCTGGTTATTTACTGTCAGTACCGGGAGCAGGGGGAATTTGAGAATTGAGGAATT
AATCAGGGCTCTGGTGGAAAATTATAATAATGTTAATGAAGTACCATTAACTAAGATAACCAGGATAGGGCTTTACGTTA
CCAAAAATGGGAATCTATATGAATTAATAGATGACCATGTAGTGGAGGCAGATTCATAG

Upstream 100 bases:

>100_bases
CGTGGGGAAACTACTGAAGATTGCAGGAATGGTTACTGTCCGGGATGTGCTGTCTGCTTTAACCTTGATGCTAAACTGGA
GTTAGTAGGGGCTGATAACA

Downstream 100 bases:

>100_bases
ATGGTAAATCAAATAATAATAAATTCAGGAATAAAGGAAAAAAGGGCTGCTATATTAATGGATAATGTTCTGGAGGACAT
AGTTATTGAGCTGGATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; Elongator /MiaB/NifB; Radical SAM Family Protein; Conserved Protein; Radical Sam Protein; LOW QUALITY PROTEIN Fe-S Oxidoreductase

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKIRAKFKKFGSLKYISHLELMNTLQRAFRRAKLPLAYSRGYNPHPRLSMGMALSVGLTGLGEYFDVELEQEIEPGLFIK
RANKCLPHGLEILRARKIPDRLKSLMAQVDTAMYRVEMDFDGKIDGRSIIKDFLSRQEIRIIRKRRKKKDKEINIRPLIK
GIEIEEDNIWLFTVSTGSRGNLRIEELIRALVENYNNVNEVPLTKITRIGLYVTKNGNLYELIDDHVVEADS

Sequences:

>Translated_232_residues
MKIRAKFKKFGSLKYISHLELMNTLQRAFRRAKLPLAYSRGYNPHPRLSMGMALSVGLTGLGEYFDVELEQEIEPGLFIK
RANKCLPHGLEILRARKIPDRLKSLMAQVDTAMYRVEMDFDGKIDGRSIIKDFLSRQEIRIIRKRRKKKDKEINIRPLIK
GIEIEEDNIWLFTVSTGSRGNLRIEELIRALVENYNNVNEVPLTKITRIGLYVTKNGNLYELIDDHVVEADS
>Mature_232_residues
MKIRAKFKKFGSLKYISHLELMNTLQRAFRRAKLPLAYSRGYNPHPRLSMGMALSVGLTGLGEYFDVELEQEIEPGLFIK
RANKCLPHGLEILRARKIPDRLKSLMAQVDTAMYRVEMDFDGKIDGRSIIKDFLSRQEIRIIRKRRKKKDKEINIRPLIK
GIEIEEDNIWLFTVSTGSRGNLRIEELIRALVENYNNVNEVPLTKITRIGLYVTKNGNLYELIDDHVVEADS

Specific function: Unknown

COG id: COG5011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26903; Mature: 26903

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRAKFKKFGSLKYISHLELMNTLQRAFRRAKLPLAYSRGYNPHPRLSMGMALSVGLTG
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCEEECCCCC
LGEYFDVELEQEIEPGLFIKRANKCLPHGLEILRARKIPDRLKSLMAQVDTAMYRVEMDF
CCHHHCCEECCCCCCCCEEHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECC
DGKIDGRSIIKDFLSRQEIRIIRKRRKKKDKEINIRPLIKGIEIEEDNIWLFTVSTGSRG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECEEEECCCEEEEEEECCCCC
NLRIEELIRALVENYNNVNEVPLTKITRIGLYVTKNGNLYELIDDHVVEADS
CEEHHHHHHHHHHCCCCCCCCCHHHEEEEEEEEECCCCEEEHHHCHHCCCCC
>Mature Secondary Structure
MKIRAKFKKFGSLKYISHLELMNTLQRAFRRAKLPLAYSRGYNPHPRLSMGMALSVGLTG
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCEEECCCCC
LGEYFDVELEQEIEPGLFIKRANKCLPHGLEILRARKIPDRLKSLMAQVDTAMYRVEMDF
CCHHHCCEECCCCCCCCEEHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECC
DGKIDGRSIIKDFLSRQEIRIIRKRRKKKDKEINIRPLIKGIEIEEDNIWLFTVSTGSRG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECEEEECCCEEEEEEECCCCC
NLRIEELIRALVENYNNVNEVPLTKITRIGLYVTKNGNLYELIDDHVVEADS
CEEHHHHHHHHHHCCCCCCCCCHHHEEEEEEEEECCCCEEEHHHCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA