| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932232
Identifier: 220932232
GI number: 220932232
Start: 1486774
End: 1487844
Strand: Reverse
Name: 220932232
Synonym: Hore_13960
Alternate gene names: NA
Gene position: 1487844-1486774 (Counterclockwise)
Preceding gene: 220932233
Following gene: 220932231
Centisome position: 57.71
GC content: 34.83
Gene sequence:
>1071_bases ATGCAGAAAAGATTTATAATTATGGTGATTTTATGTTTTTTGCTTGCCTTTACTAACCAGTTGGTCCAGGCTGAGAGGGT TTATGTTAATACTGCTGAGGCTGAAGCTGTCCTGGATCTGATGGATGGAATAGCCAAAAAAGAAGTTAAGACAAAAGATG ATATCATTAAACATCTGGAGAAGATTTATAATACGGCGGGCTATCATAGATTATGTGATTATCATGGGTATAATCCCCAT AAAAATAAGATTATGAATCGTATCTTCAGGGTTAGCTGGATTATTATCCATGAACAGACAGAAGACCTTGAAGGCTATGA CCTTTATTATCTAGATATATTCAAACACAGAGCTGAGTATCGAAAGTTTCTGGAAAGATTCAAAGGCTGGAAACCGACAG AAAAAGTTCTTAACCGGACCTATTCTTATTTTCCTGAGAAAAAGCCCTTTAAAGGAACCATATACTTTGTTGTAGATGAA TATAGTGATGGCTATACACCTGTGCCGGATATGGTCTTTTCCATTTATCAGGTAAAGAGGCTTTTAGAAGAAAAAGGGGT AGATTTTGATAATGAATTATTTCCTCACGAGTTTCATCATATTTTAACAAAAGAATTATTGTTTAAAAAATATGCACATA AGTTGATCGATTCTTCTGACCTGGCTTATTTTCTGGGATATATTATGTTAGAGGGTTATGCTGTTGAGGCTACTGCAGAT GAAGATACCAAAAATAATGTTTACATGATGAAAAGATCAGATGAAGAAATTTACAATCTATTTGCCCGTATGGAAAAGGT AATTCAAAGGAAAAATGAAAATCCTGAAGAACACTGGCGTACAGTTTATAGAGAATATTTTTCCAAAATGATAGATATCT ATACAGTGGGAACAACCATGGTTCAGGCGATTGAAGATAGGTTTGGAAAGAAAGTGCTTGTAAGGGCTTTAGAAAATCCT TCTCATTTCTTTATGCTCTACCAGAAAGCCGCTGAAAATAATGATAGCTTATTTAGTTTCCAGGAGTCAACAATGGGAAT AATCGGTGAAGCTTTTGCTGGCTCAAATTAA
Upstream 100 bases:
>100_bases TAATGGAATTGCGAAACGAAAAAGAAGCAAAAAACAGGATAGAGATTTTTTATGGTTATTGAGTCATTAAATCTGACCTG GGAAGGGGAGAGAAATTAAC
Downstream 100 bases:
>100_bases ACAGGGCCAGTTTTAATTTATTCAAAAAGCAAGGGATATTTTTTCAAGAATAAATTTTATATAAGATTAGTTAAAAAGGG GAATTAAGAGGCTCATGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MQKRFIIMVILCFLLAFTNQLVQAERVYVNTAEAEAVLDLMDGIAKKEVKTKDDIIKHLEKIYNTAGYHRLCDYHGYNPH KNKIMNRIFRVSWIIIHEQTEDLEGYDLYYLDIFKHRAEYRKFLERFKGWKPTEKVLNRTYSYFPEKKPFKGTIYFVVDE YSDGYTPVPDMVFSIYQVKRLLEEKGVDFDNELFPHEFHHILTKELLFKKYAHKLIDSSDLAYFLGYIMLEGYAVEATAD EDTKNNVYMMKRSDEEIYNLFARMEKVIQRKNENPEEHWRTVYREYFSKMIDIYTVGTTMVQAIEDRFGKKVLVRALENP SHFFMLYQKAAENNDSLFSFQESTMGIIGEAFAGSN
Sequences:
>Translated_356_residues MQKRFIIMVILCFLLAFTNQLVQAERVYVNTAEAEAVLDLMDGIAKKEVKTKDDIIKHLEKIYNTAGYHRLCDYHGYNPH KNKIMNRIFRVSWIIIHEQTEDLEGYDLYYLDIFKHRAEYRKFLERFKGWKPTEKVLNRTYSYFPEKKPFKGTIYFVVDE YSDGYTPVPDMVFSIYQVKRLLEEKGVDFDNELFPHEFHHILTKELLFKKYAHKLIDSSDLAYFLGYIMLEGYAVEATAD EDTKNNVYMMKRSDEEIYNLFARMEKVIQRKNENPEEHWRTVYREYFSKMIDIYTVGTTMVQAIEDRFGKKVLVRALENP SHFFMLYQKAAENNDSLFSFQESTMGIIGEAFAGSN >Mature_356_residues MQKRFIIMVILCFLLAFTNQLVQAERVYVNTAEAEAVLDLMDGIAKKEVKTKDDIIKHLEKIYNTAGYHRLCDYHGYNPH KNKIMNRIFRVSWIIIHEQTEDLEGYDLYYLDIFKHRAEYRKFLERFKGWKPTEKVLNRTYSYFPEKKPFKGTIYFVVDE YSDGYTPVPDMVFSIYQVKRLLEEKGVDFDNELFPHEFHHILTKELLFKKYAHKLIDSSDLAYFLGYIMLEGYAVEATAD EDTKNNVYMMKRSDEEIYNLFARMEKVIQRKNENPEEHWRTVYREYFSKMIDIYTVGTTMVQAIEDRFGKKVLVRALENP SHFFMLYQKAAENNDSLFSFQESTMGIIGEAFAGSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42326; Mature: 42326
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRFIIMVILCFLLAFTNQLVQAERVYVNTAEAEAVLDLMDGIAKKEVKTKDDIIKHLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KIYNTAGYHRLCDYHGYNPHKNKIMNRIFRVSWIIIHEQTEDLEGYDLYYLDIFKHRAEY HHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCEEHHHHHHHHHHHH RKFLERFKGWKPTEKVLNRTYSYFPEKKPFKGTIYFVVDEYSDGYTPVPDMVFSIYQVKR HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH LLEEKGVDFDNELFPHEFHHILTKELLFKKYAHKLIDSSDLAYFLGYIMLEGYAVEATAD HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCC EDTKNNVYMMKRSDEEIYNLFARMEKVIQRKNENPEEHWRTVYREYFSKMIDIYTVGTTM CCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VQAIEDRFGKKVLVRALENPSHFFMLYQKAAENNDSLFSFQESTMGIIGEAFAGSN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCC >Mature Secondary Structure MQKRFIIMVILCFLLAFTNQLVQAERVYVNTAEAEAVLDLMDGIAKKEVKTKDDIIKHLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KIYNTAGYHRLCDYHGYNPHKNKIMNRIFRVSWIIIHEQTEDLEGYDLYYLDIFKHRAEY HHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCEEHHHHHHHHHHHH RKFLERFKGWKPTEKVLNRTYSYFPEKKPFKGTIYFVVDEYSDGYTPVPDMVFSIYQVKR HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH LLEEKGVDFDNELFPHEFHHILTKELLFKKYAHKLIDSSDLAYFLGYIMLEGYAVEATAD HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCC EDTKNNVYMMKRSDEEIYNLFARMEKVIQRKNENPEEHWRTVYREYFSKMIDIYTVGTTM CCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VQAIEDRFGKKVLVRALENPSHFFMLYQKAAENNDSLFSFQESTMGIIGEAFAGSN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA