Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932215

Identifier: 220932215

GI number: 220932215

Start: 1469685

End: 1470374

Strand: Reverse

Name: 220932215

Synonym: Hore_13760

Alternate gene names: NA

Gene position: 1470374-1469685 (Counterclockwise)

Preceding gene: 220932216

Following gene: 220932214

Centisome position: 57.03

GC content: 27.83

Gene sequence:

>690_bases
ATGCCAGAAAATAAACAATTCATTTTTGAAAGTTTCGTTAATAGCTTTCATTATTTATACCAAGATGCATTATTTTTTCA
AGAACAAGCAGAAAACAGCAATAATAAAAATAGTTTTGATCATACACGCTTTTGTAGGACTGCATTATTATTATATATTT
TTAGTTTAGAAGGGCTAATTAATCGTGTTATGGATCACTTTTTACCAGAATATATTAAAAGTTTTATTATGAGAAGAGAG
CAAAAGTTTTCCATTGAAGATAAATGGGAGCTAGTTCCTTTATTATGTTCAAAGAATAAAAAAATGAGTTTTGACAAGTC
AAGTTATCCTTGGAGTCATTTTTCAGAACTTATACGACTAAGAAATGATTTTGTACATCCAAAACATAATAGGTCTGTTT
ACTATAAAGCAAAAACTTATGGTGAATGGATTCCGTTATCATGGAAGGACATTCCTGAAAAGTTAGAAGTTAAGGAAAAA
GATATAATTTACAGACAAACACAAATACCAAAGGATCCTTATGCGATAAGAGTAGAACATGTAAAAACTGCTAAAAAAGT
AGTTGACGACATTGTAAATAAATTAGATGAATATTTAGATGGAAAATTAACTAAAGAAAACTGGATACATAATGACAAAA
TGAAATTAGTATATCCTGAAAATGCAAACCTTGATGATTTACCAAAATAG

Upstream 100 bases:

>100_bases
TGATTTTTGCAAAATTCAGCAAATATCCATGCCAGGCCTTCGGCACGAGCACGTCGGGAATACTCGGGACGTTAGGCGAC
ATTCATTAAGGGGGGATTTT

Downstream 100 bases:

>100_bases
ATAATGAACGATCGCCTAACATGAGGATTTCCGCGGACGGCAAAGACCAGCCTGCCCTTCGGGACATTGCCTTTGGCACG
TCTTTTGCAAAAAAGAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MPENKQFIFESFVNSFHYLYQDALFFQEQAENSNNKNSFDHTRFCRTALLLYIFSLEGLINRVMDHFLPEYIKSFIMRRE
QKFSIEDKWELVPLLCSKNKKMSFDKSSYPWSHFSELIRLRNDFVHPKHNRSVYYKAKTYGEWIPLSWKDIPEKLEVKEK
DIIYRQTQIPKDPYAIRVEHVKTAKKVVDDIVNKLDEYLDGKLTKENWIHNDKMKLVYPENANLDDLPK

Sequences:

>Translated_229_residues
MPENKQFIFESFVNSFHYLYQDALFFQEQAENSNNKNSFDHTRFCRTALLLYIFSLEGLINRVMDHFLPEYIKSFIMRRE
QKFSIEDKWELVPLLCSKNKKMSFDKSSYPWSHFSELIRLRNDFVHPKHNRSVYYKAKTYGEWIPLSWKDIPEKLEVKEK
DIIYRQTQIPKDPYAIRVEHVKTAKKVVDDIVNKLDEYLDGKLTKENWIHNDKMKLVYPENANLDDLPK
>Mature_228_residues
PENKQFIFESFVNSFHYLYQDALFFQEQAENSNNKNSFDHTRFCRTALLLYIFSLEGLINRVMDHFLPEYIKSFIMRREQ
KFSIEDKWELVPLLCSKNKKMSFDKSSYPWSHFSELIRLRNDFVHPKHNRSVYYKAKTYGEWIPLSWKDIPEKLEVKEKD
IIYRQTQIPKDPYAIRVEHVKTAKKVVDDIVNKLDEYLDGKLTKENWIHNDKMKLVYPENANLDDLPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27656; Mature: 27525

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPENKQFIFESFVNSFHYLYQDALFFQEQAENSNNKNSFDHTRFCRTALLLYIFSLEGLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NRVMDHFLPEYIKSFIMRREQKFSIEDKWELVPLLCSKNKKMSFDKSSYPWSHFSELIRL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
RNDFVHPKHNRSVYYKAKTYGEWIPLSWKDIPEKLEVKEKDIIYRQTQIPKDPYAIRVEH
HHHCCCCCCCCEEEEEECCCCCCCCCCHHHCCHHHCCCHHHHHHHHHCCCCCCCEEEHHH
VKTAKKVVDDIVNKLDEYLDGKLTKENWIHNDKMKLVYPENANLDDLPK
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PENKQFIFESFVNSFHYLYQDALFFQEQAENSNNKNSFDHTRFCRTALLLYIFSLEGLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NRVMDHFLPEYIKSFIMRREQKFSIEDKWELVPLLCSKNKKMSFDKSSYPWSHFSELIRL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
RNDFVHPKHNRSVYYKAKTYGEWIPLSWKDIPEKLEVKEKDIIYRQTQIPKDPYAIRVEH
HHHCCCCCCCCEEEEEECCCCCCCCCCHHHCCHHHCCCHHHHHHHHHCCCCCCCEEEHHH
VKTAKKVVDDIVNKLDEYLDGKLTKENWIHNDKMKLVYPENANLDDLPK
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA