| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932214
Identifier: 220932214
GI number: 220932214
Start: 1468375
End: 1469103
Strand: Reverse
Name: 220932214
Synonym: Hore_13750
Alternate gene names: NA
Gene position: 1469103-1468375 (Counterclockwise)
Preceding gene: 220932215
Following gene: 220932207
Centisome position: 56.98
GC content: 19.62
Gene sequence:
>729_bases ATGGGCATATATGTATATTTAATGATATTATTTTTACATAAAATAGGTTTTTGGGATATATCATTATTAAAAAATACAAT TATTTGGATAGTAGCGGTAGCATTTATTTCTTCATTTAGAGCTGTTGATAATGCTAAAGATATCAATTATTTTATTAATG TTATAAAAGATAATATTAAATTAATTATTATATTAACATTTGTTGTTAATTTATACAGTTTTTCATTGATATATGAATTA ATACAAGTTTTTATTATAACTGTTTTATCAATGTTAGTAGCATTTATGAATAATAACCCAGAATATCAAGATAAAGACAG TAAGTTACTAATTAATGTTCTTAATACAATTCTTGCTATTATAGGTTTTTATGCCTTATTTCATTCAATTAAAATGACTA TTTCAAATTTAGATAGTATTAATTTAATAAAACAACTTAAATTATTATTTCTTCCATCAGTCTTATCTGTTATGTTTACT ATTTATGTATATTTTCTTGTTATTTATTCAGGTTACGAACAAATCTTTTCAAGAATAAATTTCAAAAAGACAATTGATGA CGAATATAAGCTTTATCTAAAGTTTAAGACTATGTTATTTTGTAATATAAATTTAAATAAAATTAAAAACTTTATTCCCA GGAGTAAGATTATGTATAATCATATTAATAGTAAAAGTGATGTTAAAGAAATATTAAACGATTATAAAGATAATAATTTT TCAGTATAG
Upstream 100 bases:
>100_bases TTTTTATAATATTTGCTTTGTCTGTAAAAGGTGCTAGGGAGCAAATTCCTGGTTTAATTAAGTTGCTTTTTAATAACACT TTATATTTTGGTACCTTAGT
Downstream 100 bases:
>100_bases AAAAGAGTTATTGTTAAGTTTATAGTTTTAAGAGGTAGCAACTTCAGTTAACAATATATTTCCGTTTCCGTTCCTGTCGT CACTGCACCCAAATCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MGIYVYLMILFLHKIGFWDISLLKNTIIWIVAVAFISSFRAVDNAKDINYFINVIKDNIKLIIILTFVVNLYSFSLIYEL IQVFIITVLSMLVAFMNNNPEYQDKDSKLLINVLNTILAIIGFYALFHSIKMTISNLDSINLIKQLKLLFLPSVLSVMFT IYVYFLVIYSGYEQIFSRINFKKTIDDEYKLYLKFKTMLFCNINLNKIKNFIPRSKIMYNHINSKSDVKEILNDYKDNNF SV
Sequences:
>Translated_242_residues MGIYVYLMILFLHKIGFWDISLLKNTIIWIVAVAFISSFRAVDNAKDINYFINVIKDNIKLIIILTFVVNLYSFSLIYEL IQVFIITVLSMLVAFMNNNPEYQDKDSKLLINVLNTILAIIGFYALFHSIKMTISNLDSINLIKQLKLLFLPSVLSVMFT IYVYFLVIYSGYEQIFSRINFKKTIDDEYKLYLKFKTMLFCNINLNKIKNFIPRSKIMYNHINSKSDVKEILNDYKDNNF SV >Mature_241_residues GIYVYLMILFLHKIGFWDISLLKNTIIWIVAVAFISSFRAVDNAKDINYFINVIKDNIKLIIILTFVVNLYSFSLIYELI QVFIITVLSMLVAFMNNNPEYQDKDSKLLINVLNTILAIIGFYALFHSIKMTISNLDSINLIKQLKLLFLPSVLSVMFTI YVYFLVIYSGYEQIFSRINFKKTIDDEYKLYLKFKTMLFCNINLNKIKNFIPRSKIMYNHINSKSDVKEILNDYKDNNFS V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28443; Mature: 28312
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYVYLMILFLHKIGFWDISLLKNTIIWIVAVAFISSFRAVDNAKDINYFINVIKDNIK CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH LIIILTFVVNLYSFSLIYELIQVFIITVLSMLVAFMNNNPEYQDKDSKLLINVLNTILAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH IGFYALFHSIKMTISNLDSINLIKQLKLLFLPSVLSVMFTIYVYFLVIYSGYEQIFSRIN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FKKTIDDEYKLYLKFKTMLFCNINLNKIKNFIPRSKIMYNHINSKSDVKEILNDYKDNNF CHHCCCHHHHHHHHEEEHHEECCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCC SV CC >Mature Secondary Structure GIYVYLMILFLHKIGFWDISLLKNTIIWIVAVAFISSFRAVDNAKDINYFINVIKDNIK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH LIIILTFVVNLYSFSLIYELIQVFIITVLSMLVAFMNNNPEYQDKDSKLLINVLNTILAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH IGFYALFHSIKMTISNLDSINLIKQLKLLFLPSVLSVMFTIYVYFLVIYSGYEQIFSRIN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FKKTIDDEYKLYLKFKTMLFCNINLNKIKNFIPRSKIMYNHINSKSDVKEILNDYKDNNF CHHCCCHHHHHHHHEEEHHEECCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCC SV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA