Click here to switch to the map view.

The map label for this gene is 220932207

Identifier: 220932207

GI number: 220932207

Start: 1463688

End: 1464722

Strand: Reverse

Name: 220932207

Synonym: Hore_13680

Alternate gene names: NA

Gene position: 1464722-1463688 (Counterclockwise)

Preceding gene: 220932214

Following gene: 220932206

Centisome position: 56.81

GC content: 23.48

Gene sequence:

>1035_bases
ATGACAAGAAACAGATGGATATTGAAGATTTATATTTTTATAATGATATTGACTATGATATTTGTCAATGTTCTAACTAA
TGCAAATGAACTATCTTGGGATGAGTACATAACAGAAGGATTAACTAATAATAAAATTAGAAATATGTTATCAACAAATG
AAAGTATTAAGATAAATATTAAAGAATTAATGAAAAATAAAGAATTTACGAATGTAATGGAATCATGGGAACTTAATGCT
ATTAGTGATGCGTATTTGGTTGACGTAAATAATGATAATACTAAAGAACTTTTGTTGGTTTTATGTCAAGGTTCTATGAG
AAATTATAGTTTTAAAATATATGAAAATAATGGTAATAATTTTGCTTTATTAGATGAAAAGGAAGGTTTTATGTCTCCAG
TTATCTACAATAATAAAGTTCATTTTATTAAGGTAAAGTCTGACTTTGATACGAAATTTATTAGTCAAGTTATTGAGTAC
CGTTTTGATGGATCATCGTTTAGACAAAATGTGGTATATAACATTAAAAAATATTATGATATATCAGGAATTCATAAATT
AAAAGGAATAATTAACAATAATTATTTAAATTCATTAGATAGTTATCCTGCATCAAATTCTGATATTATGTTAATCGAGA
AATCAAATGGTGATCATAATATGAATGTAGTGATAAATGATAAAAAGAACAACAATGTATTTAAATATAATATTTATTTG
CAATATACTTCTGTTGGTTATGCGCCAACTGAATGGAAAATTGGATCAAAGGATGAATTTACAAATCAATTTAAAGGAAT
GGAGCAAATATTTACTAGTAATGATGATTTAATTTGCTTTGGATATAAGTTTTATAAAGATAAATCTGATAACATTTTTA
TGTTAAAGATATCATATGATTTTTATAATAAGTTAGATAATGTAAAAGTTGAAGACTTAATAATACAAATATATAAATTT
AACAAGGATTCTGTAGAAAAATATGATAGGATAATCATTCATCCAGAAATTGAAGTTCAAAAGAGTGACATTTAG

Upstream 100 bases:

>100_bases
TCAAGCTTTGTGACAGGCCTCTGGCACAGGCACGTCGGGAACACCGGGAACGTTATCGGAAAGACAGGTATATTTTAATA
TTATTAAGGTGGGAGTATAT

Downstream 100 bases:

>100_bases
GTAATATATTTATTTTTTTAGAAAGTTTATTAGTTTAGAGAACCTGTCCATCCGATAACACAGTATTTCCGTTACGGCTA
AAGACCAGCCTACCCTACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTRNRWILKIYIFIMILTMIFVNVLTNANELSWDEYITEGLTNNKIRNMLSTNESIKINIKELMKNKEFTNVMESWELNA
ISDAYLVDVNNDNTKELLLVLCQGSMRNYSFKIYENNGNNFALLDEKEGFMSPVIYNNKVHFIKVKSDFDTKFISQVIEY
RFDGSSFRQNVVYNIKKYYDISGIHKLKGIINNNYLNSLDSYPASNSDIMLIEKSNGDHNMNVVINDKKNNNVFKYNIYL
QYTSVGYAPTEWKIGSKDEFTNQFKGMEQIFTSNDDLICFGYKFYKDKSDNIFMLKISYDFYNKLDNVKVEDLIIQIYKF
NKDSVEKYDRIIIHPEIEVQKSDI

Sequences:

>Translated_344_residues
MTRNRWILKIYIFIMILTMIFVNVLTNANELSWDEYITEGLTNNKIRNMLSTNESIKINIKELMKNKEFTNVMESWELNA
ISDAYLVDVNNDNTKELLLVLCQGSMRNYSFKIYENNGNNFALLDEKEGFMSPVIYNNKVHFIKVKSDFDTKFISQVIEY
RFDGSSFRQNVVYNIKKYYDISGIHKLKGIINNNYLNSLDSYPASNSDIMLIEKSNGDHNMNVVINDKKNNNVFKYNIYL
QYTSVGYAPTEWKIGSKDEFTNQFKGMEQIFTSNDDLICFGYKFYKDKSDNIFMLKISYDFYNKLDNVKVEDLIIQIYKF
NKDSVEKYDRIIIHPEIEVQKSDI
>Mature_343_residues
TRNRWILKIYIFIMILTMIFVNVLTNANELSWDEYITEGLTNNKIRNMLSTNESIKINIKELMKNKEFTNVMESWELNAI
SDAYLVDVNNDNTKELLLVLCQGSMRNYSFKIYENNGNNFALLDEKEGFMSPVIYNNKVHFIKVKSDFDTKFISQVIEYR
FDGSSFRQNVVYNIKKYYDISGIHKLKGIINNNYLNSLDSYPASNSDIMLIEKSNGDHNMNVVINDKKNNNVFKYNIYLQ
YTSVGYAPTEWKIGSKDEFTNQFKGMEQIFTSNDDLICFGYKFYKDKSDNIFMLKISYDFYNKLDNVKVEDLIIQIYKFN
KDSVEKYDRIIIHPEIEVQKSDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40585; Mature: 40454

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNRWILKIYIFIMILTMIFVNVLTNANELSWDEYITEGLTNNKIRNMLSTNESIKINI
CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHCCCCEEEEEH
KELMKNKEFTNVMESWELNAISDAYLVDVNNDNTKELLLVLCQGSMRNYSFKIYENNGNN
HHHHCCCHHHHHHHHCCCCEECCEEEEECCCCCHHHEEEEEECCCCCCEEEEEEECCCCE
FALLDEKEGFMSPVIYNNKVHFIKVKSDFDTKFISQVIEYRFDGSSFRQNVVYNIKKYYD
EEEEECCCCCCCCEEECCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHEEHHHHCC
ISGIHKLKGIINNNYLNSLDSYPASNSDIMLIEKSNGDHNMNVVINDKKNNNVFKYNIYL
CCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEEE
QYTSVGYAPTEWKIGSKDEFTNQFKGMEQIFTSNDDLICFGYKFYKDKSDNIFMLKISYD
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEECH
FYNKLDNVKVEDLIIQIYKFNKDSVEKYDRIIIHPEIEVQKSDI
HHHCCCCCCHHHEEEEEEECCCHHHHHHCEEEECCCEEEECCCC
>Mature Secondary Structure 
TRNRWILKIYIFIMILTMIFVNVLTNANELSWDEYITEGLTNNKIRNMLSTNESIKINI
CCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHCCCCEEEEEH
KELMKNKEFTNVMESWELNAISDAYLVDVNNDNTKELLLVLCQGSMRNYSFKIYENNGNN
HHHHCCCHHHHHHHHCCCCEECCEEEEECCCCCHHHEEEEEECCCCCCEEEEEEECCCCE
FALLDEKEGFMSPVIYNNKVHFIKVKSDFDTKFISQVIEYRFDGSSFRQNVVYNIKKYYD
EEEEECCCCCCCCEEECCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHEEHHHHCC
ISGIHKLKGIINNNYLNSLDSYPASNSDIMLIEKSNGDHNMNVVINDKKNNNVFKYNIYL
CCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEEE
QYTSVGYAPTEWKIGSKDEFTNQFKGMEQIFTSNDDLICFGYKFYKDKSDNIFMLKISYD
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEECH
FYNKLDNVKVEDLIIQIYKFNKDSVEKYDRIIIHPEIEVQKSDI
HHHCCCCCCHHHEEEEEEECCCHHHHHHCEEEECCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA