| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is sthA [C]
Identifier: 220932154
GI number: 220932154
Start: 1415473
End: 1416744
Strand: Reverse
Name: sthA [C]
Synonym: Hore_13170
Alternate gene names: 220932154
Gene position: 1416744-1415473 (Counterclockwise)
Preceding gene: 220932155
Following gene: 220932152
Centisome position: 54.95
GC content: 41.82
Gene sequence:
>1272_bases ATGACTGAATATGATGTTATTGTATGTGGTGGTGGTCCCGGGGGGATCGCAGCTTCCATTGGGGCTGCCCGGATGGGCAA AAAAGTCCTTCTGGTAGAAAGGTATGGTTTTCTCGGTGGTGGGGCAACAGCCATGCTGGTAAACCCCTTTATGACCTACT ATTCAGGAGAAAGACAGATTATCAGGGGTATTTTCCAGGAAATAGTAGAACGGTTAAAGGATATGAACGCCTTTGGTAAC AGCTTAATGAAAGAAACCCCCTGGGCCTTTGACCCTGAAGCTTTTAAGGTGGTAGCTGACCGTCTCTGCTCGGAAAATGG AGTTAATATCCATTTCCATGCCATGTTAGCCGGTGTTGAAACCTGTGGAAATGAAATTAACAGTATAAAGGTGGTTACTA AAGGTGGTTTAAAGAAATTAAAGGCTAAAATATATGTTGATAGTACTGGTGATGCTGATCTGGCTTATTTAGCAGGGGTT AGAGTAGAAAAAGGGAGACCTAAGGATGGTTTAACCCAGCCCATGACCTTGAATTTTAGAATGGCCAACGTAGACTTAGA AAGAATGCCTTCCCGGGGAGAAATAACAGAAAAATATATAGAAGCTAAAGAGAAAGGAATAATTGACTGTCCCCGTGAAG ATATTTTATTTTTCTTTACAACAAACCCCGGGGTGGTCCATTTTAACCAGACCAGGGTTATTAAGCATGACCCTACTGAT TCTGAGTCTTTGAGCAAAGCAGAAATTGAAGGAAGAAGGCAGAGCTGGGAGTTATCACGGTGGTTAATTAAAAATATTCC TGGGTTTGAGAATGCCTATCTTCAGCAAACAGCAACCCAGATAGGGATCAGGGAATCACGCCGGGTTATTGGGGATTATG TATTAACTGTTAATGACCTCCTGAAAACTAGAAAATTTGATGATGTTGTTGCCTGTGGGAGTTATCCTATAGATATTCAT AATCCAGAGGGTGAAGGTACGATTATGAAGTACCTTGAAGAAGGAGAATGGTATGACATCCCTTATCGTTGCCTTGTTCC TCAAAACTTAAATAATTTACTGATCGGTAGCCGTTCTATTTCGTCAACCCATGAGGCCCATTCTTCATTGAGGGTTATGC CTATAGTTTTTGCCATTGGTCAGGCAGCTGGAATTGCAGCTGCAGTCAGTCTGGAAACAGGTAAAAACCCGCATCGAATC GATTATAGAATTTTACAGGAAGAGTTAATAAAACAGGGGGCTTTTCTGGGTGATAATGTAATAGTGGAGTAA
Upstream 100 bases:
>100_bases GTTAAAGGATAAAATATATTTGTATTATATATAAACTTATAAAGATATATTTATAAAATAAATGCTAAAATGTTTAAGGA CTTAATGGAGGTAGTTTGTT
Downstream 100 bases:
>100_bases TTATAAAATAAAATTTTTATAATATAATTTAAAAGAATTAATTAATAGGTGTATTATATATATGACTAAATATAAATAAA AGATAATATAAATAAAAAAC
Product: FAD dependent oxidoreductase
Products: H+; Nicotinamide adenine dinucleotide; Nicotinamide adenine dinucleotide phosphate - reduced [C]
Alternate protein names: Invasion Protein IbeA; Glucose-Inhibited Division Protein A; Pyridine Nucleotide-Disulphide Oxidoreductase; Fumarate Reductase/Succinate Dehydrogenase Flavoprotein; Coagulation Factor 5/8 Type Domain Protein; Dihydrolipoamide Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Thiamine Biosynthesis Thi4 Protein; Invasion Protein IbeA Family Protein; Protein Involved In Invasion; FAD Dependent Oxidoreductase Domain Protein; Invasion Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTEYDVIVCGGGPGGIAASIGAARMGKKVLLVERYGFLGGGATAMLVNPFMTYYSGERQIIRGIFQEIVERLKDMNAFGN SLMKETPWAFDPEAFKVVADRLCSENGVNIHFHAMLAGVETCGNEINSIKVVTKGGLKKLKAKIYVDSTGDADLAYLAGV RVEKGRPKDGLTQPMTLNFRMANVDLERMPSRGEITEKYIEAKEKGIIDCPREDILFFFTTNPGVVHFNQTRVIKHDPTD SESLSKAEIEGRRQSWELSRWLIKNIPGFENAYLQQTATQIGIRESRRVIGDYVLTVNDLLKTRKFDDVVACGSYPIDIH NPEGEGTIMKYLEEGEWYDIPYRCLVPQNLNNLLIGSRSISSTHEAHSSLRVMPIVFAIGQAAGIAAAVSLETGKNPHRI DYRILQEELIKQGAFLGDNVIVE
Sequences:
>Translated_423_residues MTEYDVIVCGGGPGGIAASIGAARMGKKVLLVERYGFLGGGATAMLVNPFMTYYSGERQIIRGIFQEIVERLKDMNAFGN SLMKETPWAFDPEAFKVVADRLCSENGVNIHFHAMLAGVETCGNEINSIKVVTKGGLKKLKAKIYVDSTGDADLAYLAGV RVEKGRPKDGLTQPMTLNFRMANVDLERMPSRGEITEKYIEAKEKGIIDCPREDILFFFTTNPGVVHFNQTRVIKHDPTD SESLSKAEIEGRRQSWELSRWLIKNIPGFENAYLQQTATQIGIRESRRVIGDYVLTVNDLLKTRKFDDVVACGSYPIDIH NPEGEGTIMKYLEEGEWYDIPYRCLVPQNLNNLLIGSRSISSTHEAHSSLRVMPIVFAIGQAAGIAAAVSLETGKNPHRI DYRILQEELIKQGAFLGDNVIVE >Mature_422_residues TEYDVIVCGGGPGGIAASIGAARMGKKVLLVERYGFLGGGATAMLVNPFMTYYSGERQIIRGIFQEIVERLKDMNAFGNS LMKETPWAFDPEAFKVVADRLCSENGVNIHFHAMLAGVETCGNEINSIKVVTKGGLKKLKAKIYVDSTGDADLAYLAGVR VEKGRPKDGLTQPMTLNFRMANVDLERMPSRGEITEKYIEAKEKGIIDCPREDILFFFTTNPGVVHFNQTRVIKHDPTDS ESLSKAEIEGRRQSWELSRWLIKNIPGFENAYLQQTATQIGIRESRRVIGDYVLTVNDLLKTRKFDDVVACGSYPIDIHN PEGEGTIMKYLEEGEWYDIPYRCLVPQNLNNLLIGSRSISSTHEAHSSLRVMPIVFAIGQAAGIAAAVSLETGKNPHRID YRILQEELIKQGAFLGDNVIVE
Specific function: Conversion Of NADPH, Generated By Peripheral Catabolic Pathways, To NADH, Which Can Enter The Respiratory Chain For Energy Generation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.6.1.1 [C]
Molecular weight: Translated: 46971; Mature: 46839
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYDVIVCGGGPGGIAASIGAARMGKKVLLVERYGFLGGGATAMLVNPFMTYYSGERQI CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHH IRGIFQEIVERLKDMNAFGNSLMKETPWAFDPEAFKVVADRLCSENGVNIHFHAMLAGVE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHH TCGNEINSIKVVTKGGLKKLKAKIYVDSTGDADLAYLAGVRVEKGRPKDGLTQPMTLNFR HHCCCCCEEEEEECCCCEEEEEEEEEECCCCCCEEEHCCEEEECCCCCCCCCCCEEEEEE MANVDLERMPSRGEITEKYIEAKEKGIIDCPREDILFFFTTNPGVVHFNQTRVIKHDPTD EECCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCEEEEEECCCC SESLSKAEIEGRRQSWELSRWLIKNIPGFENAYLQQTATQIGIRESRRVIGDYVLTVNDL CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHH LKTRKFDDVVACGSYPIDIHNPEGEGTIMKYLEEGEWYDIPYRCLVPQNLNNLLIGSRSI HHHCCCCCEEECCCCEEEEECCCCCCHHHHHHHCCCEECCCEEEECCCCCCCEEEECCCC SSTHEAHSSLRVMPIVFAIGQAAGIAAAVSLETGKNPHRIDYRILQEELIKQGAFLGDNV CHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC IVE EEC >Mature Secondary Structure TEYDVIVCGGGPGGIAASIGAARMGKKVLLVERYGFLGGGATAMLVNPFMTYYSGERQI CCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHH IRGIFQEIVERLKDMNAFGNSLMKETPWAFDPEAFKVVADRLCSENGVNIHFHAMLAGVE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHH TCGNEINSIKVVTKGGLKKLKAKIYVDSTGDADLAYLAGVRVEKGRPKDGLTQPMTLNFR HHCCCCCEEEEEECCCCEEEEEEEEEECCCCCCEEEHCCEEEECCCCCCCCCCCEEEEEE MANVDLERMPSRGEITEKYIEAKEKGIIDCPREDILFFFTTNPGVVHFNQTRVIKHDPTD EECCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCEEEEEECCCC SESLSKAEIEGRRQSWELSRWLIKNIPGFENAYLQQTATQIGIRESRRVIGDYVLTVNDL CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHH LKTRKFDDVVACGSYPIDIHNPEGEGTIMKYLEEGEWYDIPYRCLVPQNLNNLLIGSRSI HHHCCCCCEEECCCCEEEEECCCCCCHHHHHHHCCCEECCCEEEECCCCCCCEEEECCCC SSTHEAHSSLRVMPIVFAIGQAAGIAAAVSLETGKNPHRIDYRILQEELIKQGAFLGDNV CHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC IVE EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: 2'-AMP; FAD; p-Hydroxymercuribenzoate [C]
Metal ions: Ca2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H+; Nicotinamide adenine dinucleotide - reduced; Nicotinamide adenine dinucleotide phosphate [C]
Specific reaction: (2) H+ (Extracellular) + Nicotinamide adenine dinucleotide - reduced + Nicotinamide adenine dinucleotide phosphate --> (2) H+ + Nicotinamide adenine dinucleotide + Nicotinamide adenine dinucleotide phosphate - reduced [C]
General reaction: Redox reaction [C]
Inhibitor: p-Hydroxy mercuribenzoate reducedsubstrate, [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA