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The map label for this gene is yurN [H]

Identifier: 220932150

GI number: 220932150

Start: 1410796

End: 1411677

Strand: Reverse

Name: yurN [H]

Synonym: Hore_13130

Alternate gene names: 220932150

Gene position: 1411677-1410796 (Counterclockwise)

Preceding gene: 220932151

Following gene: 220932149

Centisome position: 54.76

GC content: 29.71

Gene sequence:

>882_bases
ATGGAACATATATTTAAACATAAAAATAAGTATATCTTTTTGGGTATTACTCCAGCTTTAATTGTTTATTTTTTGTTTGT
TTTGGTTCCAATAATAATATCTTTCTATTATTCATTCATAGAATGGAATGGTTTTTCCCCGGATTTAAAATTTGTTGCCC
TGGACAATTTTATCGATATGTTCCAAAATTCTATTTTCTGGATTTCATTAAAAAATAATATAGTTGTTATTTTAGCCTCT
GTTTTTGGACAGGTTCCCCTGGGGTTACTACTGGCTTTATTAGTAAACCAAAAAATTAAAGGGTCCCATTTTTTTAGGAC
AGTTATATTTTTGCCTGTAGTGATTTCAGCAGTTATTATTTCACTTATCTGGAGTATGGTCTATAATTATCAGTTTGGAT
TAATCAACAAATTTTTAAGAATAGTGGGATTAAATTCATGGGCACAAAATTGGTTAGGTGATCCAAATTTAGCAATGTAT
TCTGTTGCTATTACTGTAATCTGGCAGTTTATTGGACTGTATTTTGTTATATTTCTGGCTGCTCTTCAAAATGTACCGAA
AGAAATATTGGAAGCTGCGGAAATAGATGGAGCTCATGGTTTAAAAAGAACTTTTCATATTATTATACCAATAATCTGGG
ATACAATTCTTGCATCCATAGTTTTATGTATTAGTGGTAGTTTAAAAATTTTTGGTTTAATTTATGTCATGACTAATGGT
GGGCCAGCCCATTCAACTGAAGTTTTAGCACTTCATTTATATGAAAAAAGCTTTTCTTCATTAAGATATGGTTATGGTAG
TGCTGTGTCAGTATTTGTAGTCATTTTTGGACTTTTTCTAGTTATTACAATAAAAAAGCTATTTAACAGGAAAACTGTAT
AA

Upstream 100 bases:

>100_bases
TGCTAAAGAGTTACAAAAAAGTTTAGATTAATGTTAAGAAAGGAGAGACCAGTAAGCTGGTCTCTCCTTGAATAAAAATT
ATTAAGTTAGGGGGGAGATT

Downstream 100 bases:

>100_bases
ATATGGAGGTGAAATTTATGAACACTAAAGCCTTTATTAATAAAAAGAAAATTAAACAGATAGTGATATATACAATTTTA
ATTATATTTGCAGTTGTAAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MEHIFKHKNKYIFLGITPALIVYFLFVLVPIIISFYYSFIEWNGFSPDLKFVALDNFIDMFQNSIFWISLKNNIVVILAS
VFGQVPLGLLLALLVNQKIKGSHFFRTVIFLPVVISAVIISLIWSMVYNYQFGLINKFLRIVGLNSWAQNWLGDPNLAMY
SVAITVIWQFIGLYFVIFLAALQNVPKEILEAAEIDGAHGLKRTFHIIIPIIWDTILASIVLCISGSLKIFGLIYVMTNG
GPAHSTEVLALHLYEKSFSSLRYGYGSAVSVFVVIFGLFLVITIKKLFNRKTV

Sequences:

>Translated_293_residues
MEHIFKHKNKYIFLGITPALIVYFLFVLVPIIISFYYSFIEWNGFSPDLKFVALDNFIDMFQNSIFWISLKNNIVVILAS
VFGQVPLGLLLALLVNQKIKGSHFFRTVIFLPVVISAVIISLIWSMVYNYQFGLINKFLRIVGLNSWAQNWLGDPNLAMY
SVAITVIWQFIGLYFVIFLAALQNVPKEILEAAEIDGAHGLKRTFHIIIPIIWDTILASIVLCISGSLKIFGLIYVMTNG
GPAHSTEVLALHLYEKSFSSLRYGYGSAVSVFVVIFGLFLVITIKKLFNRKTV
>Mature_293_residues
MEHIFKHKNKYIFLGITPALIVYFLFVLVPIIISFYYSFIEWNGFSPDLKFVALDNFIDMFQNSIFWISLKNNIVVILAS
VFGQVPLGLLLALLVNQKIKGSHFFRTVIFLPVVISAVIISLIWSMVYNYQFGLINKFLRIVGLNSWAQNWLGDPNLAMY
SVAITVIWQFIGLYFVIFLAALQNVPKEILEAAEIDGAHGLKRTFHIIIPIIWDTILASIVLCISGSLKIFGLIYVMTNG
GPAHSTEVLALHLYEKSFSSLRYGYGSAVSVFVVIFGLFLVITIKKLFNRKTV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=278, Percent_Identity=30.2158273381295, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787570, Length=247, Percent_Identity=25.9109311740891, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1790465, Length=225, Percent_Identity=25.3333333333333, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33216; Mature: 33216

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHIFKHKNKYIFLGITPALIVYFLFVLVPIIISFYYSFIEWNGFSPDLKFVALDNFIDM
CCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHH
FQNSIFWISLKNNIVVILASVFGQVPLGLLLALLVNQKIKGSHFFRTVIFLPVVISAVII
HHCCEEEEEECCCEEEHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SLIWSMVYNYQFGLINKFLRIVGLNSWAQNWLGDPNLAMYSVAITVIWQFIGLYFVIFLA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALQNVPKEILEAAEIDGAHGLKRTFHIIIPIIWDTILASIVLCISGSLKIFGLIYVMTNG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
GPAHSTEVLALHLYEKSFSSLRYGYGSAVSVFVVIFGLFLVITIKKLFNRKTV
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEHIFKHKNKYIFLGITPALIVYFLFVLVPIIISFYYSFIEWNGFSPDLKFVALDNFIDM
CCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHH
FQNSIFWISLKNNIVVILASVFGQVPLGLLLALLVNQKIKGSHFFRTVIFLPVVISAVII
HHCCEEEEEECCCEEEHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SLIWSMVYNYQFGLINKFLRIVGLNSWAQNWLGDPNLAMYSVAITVIWQFIGLYFVIFLA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALQNVPKEILEAAEIDGAHGLKRTFHIIIPIIWDTILASIVLCISGSLKIFGLIYVMTNG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
GPAHSTEVLALHLYEKSFSSLRYGYGSAVSVFVVIFGLFLVITIKKLFNRKTV
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]